RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 C10orf113Q5VZT2 155 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 SCGB1D4Q6XE38 83 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 MUSTN1Q8IVN3 82 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 VKORC1L1Q8N0U8 176 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 C20orf197Q8N268 126 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 TMEM75Q8N9X5 138 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 ZCCHC13Q8WW36 166 aaKnown RBP1.84□□□□□ -2.11
LINC01040-201ENST00000425048 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 BPESC1Q9GZL8 116 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 LAMTOR3Q9UHA4 124 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 SVILO95425 2214 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 TNCP24821 2201 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 TRAV7A0A075B6U4 112 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 IGHV5-51A0A0C4DH38 117 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 A0A0J9YX75 114 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 TMEM30CPA0ZSE6 113 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1BA6NDE4 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1EA6NEQ0 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 C11orf86A6NJI1 115 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 H3BTX0 84 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 H7C2G1 150 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 I3L3M4 83 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 K7EMT4 169 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 LHBP01229 141 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1DP0C7P1 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1A1P0DJD3 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1CP0DJD4 496 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RPL28P46779 137 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 LAGE3Q14657 143 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1FQ15415 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 FAM27BQ5VT28 67 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 PRNTQ86SH4 94 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 LY6G5BQ8NDX9 201 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 SPTSSAQ969W0 71 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 TOMM6Q96B49 74 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 TMEM14BQ9NUH8 114 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 LINC00588Q9Y4M8 146 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 CADP27708 2225 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 BRWD1Q9NSI6 2320 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 TRAV8-3A0A0A6YYJ7 113 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 TRAV13-2A0A0B4J235 113 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 IGHV5-10-1A0A0J9YXX1 117 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 SDHAF1A6NFY7 115 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 C12orf77C9JDV5 145 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 F8WEM9 126 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 M0R378 163 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 COX7A2P2O60397 106 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 SH2D1AO60880 128 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 INAFM2P0DMQ5 153 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 RNASE4P34096 147 aaKnown RBP1.82□□□□□ -2.12
LINC01040-201ENST00000425048 DAD1P61803 113 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 RBM3P98179 157 aaKnown RBP1.82□□□□□ -2.12
LINC01040-201ENST00000425048 PRCDQ00LT1 54 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 PLGLAQ15195 96 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 CLLU1OSQ5K130 101 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 VMO1Q7Z5L0 202 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 WDR86Q86TI4 376 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 NKAPP1Q8N9T2 125 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 OBSCN-AS1Q96MR7 158 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 C11orf68Q9H3H3 251 aaKnown RBP1.82□□□□□ -2.12
LINC01040-201ENST00000425048 LINC00846Q9NV44 126 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 MRPL36Q9P0J6 103 aaKnown RBP1.82□□□□□ -2.12
LINC01040-201ENST00000425048 TMEM14CQ9P0S9 112 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 SEC16AO15027 2179 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 TRBV27A0A0K0K1C4 114 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 E7EQL1 145 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 M0R1W7 72 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 COX7A2LO14548 114 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 LEPROTO15243 131 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 NDUFC1O43677 76 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 TRBV12-3P01733 135 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 COX6CP09669 75 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 BAALC-AS2P0C853 105 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 LGALS3P17931 250 aaKnown RBP1.81□□□□□ -2.12
LINC01040-201ENST00000425048 SOSTDC1Q6X4U4 206 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 Q6ZS52 159 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 SCGB3A1Q96QR1 104 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 SMIM2Q9BVW6 85 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 DEFB127Q9H1M4 99 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 BAHCC1Q9P281 2608 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 TRAV23DV6A0A075B6W5 121 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 IGHV1-45A0A0A0MS14 117 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 IGHV1-69DA0A0B4J2H0 117 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 TRBV10-3A0A0K0K1G6 114 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 A6NN06 94 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 C10orf142B7Z368 130 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 J3QT63 122 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 ZNF73O43830 326 aaPredicted RBP1.8□□□□□ -2.12
LINC01040-201ENST00000425048 NDUFS5O43920 106 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 TRGV3P03979 118 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 MIFP14174 115 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 CD52P31358 61 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 ZNF80P51504 273 aaPredicted RBP1.8□□□□□ -2.12
LINC01040-201ENST00000425048 Q1T7F1 81 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 ESRGQ1W209 222 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 ATP5EP2Q5VTU8 51 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 PHF5AQ7RTV0 110 aaKnown RBP1.8□□□□□ -2.12
LINC01040-201ENST00000425048 SNURFQ9Y675 71 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 NAV3Q8IVL0 2385 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms