RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 SSPOA2VEC9 5147 aa3.45□□□□□ -1.86
HDAC8-212ENST00000421523 TRBV6-5A0A0K0K1A5 114 aa3.45□□□□□ -1.86
HDAC8-212ENST00000421523 AMTP48728 403 aa3.45□□□□□ -1.86
HDAC8-212ENST00000421523 TWIST1Q15672 202 aa3.45□□□□□ -1.86
HDAC8-212ENST00000421523 CFAP161Q6P656 301 aa3.45□□□□□ -1.86
HDAC8-212ENST00000421523 TCTE3Q8IZS6 198 aa3.45□□□□□ -1.86
HDAC8-212ENST00000421523 RPP21Q9H633 154 aaKnown RBP3.45□□□□□ -1.86
HDAC8-212ENST00000421523 BIN3Q9NQY0 253 aa3.45□□□□□ -1.86
HDAC8-212ENST00000421523 AP5S1Q9NUS5 200 aa3.45□□□□□ -1.86
HDAC8-212ENST00000421523 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.44□□□□□ -1.86
HDAC8-212ENST00000421523 A0A096LNI7 61 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 LINC00959A0A1B0GUT2 108 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 IGKV2-29A2NJV5 120 aaPredicted RBP3.44□□□□□ -1.86
HDAC8-212ENST00000421523 SDHAF1A6NFY7 115 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 UBE2L6O14933 153 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 FGF6P10767 208 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 TAGLN2P37802 199 aaKnown RBP3.44□□□□□ -1.86
HDAC8-212ENST00000421523 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
HDAC8-212ENST00000421523 HIGD2BQ4VC39 106 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 EIF5AL1Q6IS14 154 aaKnown RBP3.44□□□□□ -1.86
HDAC8-212ENST00000421523 FAM231DQ6ZW35 169 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 OR5A1Q8NGJ0 315 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 CDC42SE2Q9NRR3 84 aa3.44□□□□□ -1.86
HDAC8-212ENST00000421523 USH2AO75445 5202 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 IGKV3OR2-268A0A0C4DH90 116 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 TRBV27A0A0K0K1C4 114 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 TMEM250H0YL14 139 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 TEX46H3BTG2 121 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 I3L3M4 83 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 TSHBP01222 138 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 ZNF25P17030 456 aaPredicted RBP3.43□□□□□ -1.86
HDAC8-212ENST00000421523 MAJINQ3KP22 176 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 CT83Q5H943 113 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 TEX261Q6UWH6 196 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 MRPL52Q86TS9 123 aaKnown RBP3.43□□□□□ -1.86
HDAC8-212ENST00000421523 SLC51BQ86UW2 128 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 STPG4Q8N801 248 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 PRR26Q8N8Z3 221 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 FAM210AQ96ND0 272 aa3.43□□□□□ -1.86
HDAC8-212ENST00000421523 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
HDAC8-212ENST00000421523 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
HDAC8-212ENST00000421523 IGKV2-24A0A0C4DH68 120 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 A8MWL6 223 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 CCL25O15444 150 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 APCSP02743 223 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 RAB4AP20338 218 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 CD164L2Q6UWJ8 174 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 FAM104AQ969W3 186 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 LINC00526Q96FQ7 95 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 TMEM191AQ9H0A3 160 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 PSORS1C2Q9UIG4 136 aa3.42□□□□□ -1.86
HDAC8-212ENST00000421523 CSDC2Q9Y534 153 aaKnown RBP3.42□□□□□ -1.86
HDAC8-212ENST00000421523 IGHV1-58A0A0C4DH39 117 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 GATCO43716 136 aaKnown RBP3.41□□□□□ -1.86
HDAC8-212ENST00000421523 XCL1P47992 114 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 PTTG1IPP53801 180 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 AMMECR1LQ6DCA0 310 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 RNASEKQ6P5S7 137 aaKnown RBP3.41□□□□□ -1.86
HDAC8-212ENST00000421523 LINC01551Q86U37 167 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 ZNF664Q8N3J9 261 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 NRACQ8N912 160 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 NUP35Q8NFH5 326 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 TSKUQ8WUA8 353 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 LINC00474Q9P2X8 69 aa3.41□□□□□ -1.86
HDAC8-212ENST00000421523 A0A1B0GUT8 65 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 A0A1W2PNN7 141 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 HIGD1CA8MV81 97 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 PMCHP20382 165 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 SYCNQ0VAF6 134 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 Q6ZRP5 223 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 AMN1Q8IY45 258 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 MRAP2Q96G30 205 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 CARD19Q96LW7 228 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 ST20Q9HBF5 79 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 TMEM242Q9NWH2 141 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 V9GYV3 84 aa3.4□□□□□ -1.87
HDAC8-212ENST00000421523 IGLV4-69A0A075B6H9 119 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 TRBV24-1A0A075B6N3 115 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 C7orf77A4D0Y5 90 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 C1orf196B1AJZ1 125 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.39□□□□□ -1.87
HDAC8-212ENST00000421523 SRP19P09132 144 aaKnown RBP3.39□□□□□ -1.87
HDAC8-212ENST00000421523 CAMPP49913 170 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 BLOC1S1P78537 153 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 SS18Q15532 418 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 ALKAL2Q6UX46 152 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 SMIM15Q7Z3B0 74 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 TMEM101Q96IK0 257 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 BTF3L4Q96K17 158 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 CDIP1Q9H305 208 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 OSTCQ9NRP0 149 aa3.39□□□□□ -1.87
HDAC8-212ENST00000421523 IGHV3OR16-9A0A0B4J2B5 98 aa3.38□□□□□ -1.87
HDAC8-212ENST00000421523 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
HDAC8-212ENST00000421523 ZNF561-AS1K7EIQ3 104 aa3.38□□□□□ -1.87
HDAC8-212ENST00000421523 VCYO14598 125 aa3.38□□□□□ -1.87
HDAC8-212ENST00000421523 APOMO95445 188 aa3.38□□□□□ -1.87
HDAC8-212ENST00000421523 SUMO2P61956 95 aaKnown RBP3.38□□□□□ -1.87
HDAC8-212ENST00000421523 RPL32P62910 135 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms