RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 TMEM101Q96IK0 257 aa11.88□□□□□ -0.51
VARS2-202ENST00000421263 CDC42SE2Q9NRR3 84 aa11.88□□□□□ -0.51
VARS2-202ENST00000421263 CCL25O15444 150 aa11.87□□□□□ -0.51
VARS2-202ENST00000421263 CEBPGP53567 150 aa11.87□□□□□ -0.51
VARS2-202ENST00000421263 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
VARS2-202ENST00000421263 SMIM7Q9BQ49 75 aa11.87□□□□□ -0.51
VARS2-202ENST00000421263 OSTCQ9NRP0 149 aa11.87□□□□□ -0.51
VARS2-202ENST00000421263 TMEM242Q9NWH2 141 aa11.87□□□□□ -0.51
VARS2-202ENST00000421263 IGHV1-58A0A0C4DH39 117 aa11.86□□□□□ -0.51
VARS2-202ENST00000421263 IGKV2-24A0A0C4DH68 120 aa11.86□□□□□ -0.51
VARS2-202ENST00000421263 XCL1P47992 114 aa11.86□□□□□ -0.51
VARS2-202ENST00000421263 STPG4Q8N801 248 aa11.86□□□□□ -0.51
VARS2-202ENST00000421263 MRAP2Q96G30 205 aa11.86□□□□□ -0.51
VARS2-202ENST00000421263 A0A096LNI7 61 aa11.85□□□□□ -0.51
VARS2-202ENST00000421263 EIF5A2Q9GZV4 153 aaKnown RBP11.85□□□□□ -0.51
VARS2-202ENST00000421263 hCG_2014768A0A024R1R8 64 aa11.84□□□□□ -0.51
VARS2-202ENST00000421263 CD164L2Q6UWJ8 174 aa11.84□□□□□ -0.51
VARS2-202ENST00000421263 AMN1Q8IY45 258 aa11.84□□□□□ -0.51
VARS2-202ENST00000421263 ZNF664Q8N3J9 261 aa11.84□□□□□ -0.51
VARS2-202ENST00000421263 ZNF727A8MUV8 499 aa11.83□□□□□ -0.52
VARS2-202ENST00000421263 SRP19P09132 144 aaKnown RBP11.83□□□□□ -0.52
VARS2-202ENST00000421263 SS18Q15532 418 aa11.83□□□□□ -0.52
VARS2-202ENST00000421263 LINC00526Q96FQ7 95 aa11.83□□□□□ -0.52
VARS2-202ENST00000421263 LINC00474Q9P2X8 69 aa11.83□□□□□ -0.52
VARS2-202ENST00000421263 V9GYV3 84 aa11.83□□□□□ -0.52
VARS2-202ENST00000421263 C7orf77A4D0Y5 90 aa11.82□□□□□ -0.52
VARS2-202ENST00000421263 VCYO14598 125 aa11.82□□□□□ -0.52
VARS2-202ENST00000421263 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
VARS2-202ENST00000421263 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
VARS2-202ENST00000421263 NUP35Q8NFH5 326 aa11.81□□□□□ -0.52
VARS2-202ENST00000421263 RIGQ13278 110 aa11.8□□□□□ -0.52
VARS2-202ENST00000421263 NRACQ8N912 160 aa11.8□□□□□ -0.52
VARS2-202ENST00000421263 CARD19Q96LW7 228 aa11.8□□□□□ -0.52
VARS2-202ENST00000421263 LINC01600Q96MT4 127 aa11.8□□□□□ -0.52
VARS2-202ENST00000421263 PKIGQ9Y2B9 76 aa11.8□□□□□ -0.52
VARS2-202ENST00000421263 SMKR1H3BMG3 65 aa11.79□□□□□ -0.52
VARS2-202ENST00000421263 PPP1R17O96001 155 aa11.79□□□□□ -0.52
VARS2-202ENST00000421263 SYCNQ0VAF6 134 aa11.79□□□□□ -0.52
VARS2-202ENST00000421263 ZNF561-AS1K7EIQ3 104 aa11.78□□□□□ -0.52
VARS2-202ENST00000421263 ISOC2Q96AB3 205 aa11.78□□□□□ -0.52
VARS2-202ENST00000421263 UBE2D4Q9Y2X8 147 aa11.78□□□□□ -0.52
VARS2-202ENST00000421263 C1orf196B1AJZ1 125 aa11.77□□□□□ -0.53
VARS2-202ENST00000421263 SUMO2P61956 95 aaKnown RBP11.77□□□□□ -0.53
VARS2-202ENST00000421263 FCER1GP30273 86 aa11.76□□□□□ -0.53
VARS2-202ENST00000421263 RPL23P62829 140 aaKnown RBP11.76□□□□□ -0.53
VARS2-202ENST00000421263 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.53
VARS2-202ENST00000421263 TMEM241Q24JQ0 296 aa11.76□□□□□ -0.53
VARS2-202ENST00000421263 FAM74A3Q4VXF1 159 aa11.76□□□□□ -0.53
VARS2-202ENST00000421263 FAM104BQ5XKR9 115 aa11.76□□□□□ -0.53
VARS2-202ENST00000421263 NAT8BQ9UHF3 227 aa11.76□□□□□ -0.53
VARS2-202ENST00000421263 CAMPP49913 170 aa11.75□□□□□ -0.53
VARS2-202ENST00000421263 SMAGPQ0VAQ4 97 aa11.75□□□□□ -0.53
VARS2-202ENST00000421263 LRP2P98164 4655 aa11.75□□□□□ -0.53
VARS2-202ENST00000421263 IGLV4-69A0A075B6H9 119 aa11.74□□□□□ -0.53
VARS2-202ENST00000421263 TRBV24-1A0A075B6N3 115 aa11.74□□□□□ -0.53
VARS2-202ENST00000421263 PPP1R2P9O14990 202 aa11.74□□□□□ -0.53
VARS2-202ENST00000421263 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
VARS2-202ENST00000421263 MRPL51Q4U2R6 128 aaKnown RBP11.74□□□□□ -0.53
VARS2-202ENST00000421263 SPINK6Q6UWN8 80 aa11.74□□□□□ -0.53
VARS2-202ENST00000421263 KIR2DL4Q99706 377 aa11.74□□□□□ -0.53
VARS2-202ENST00000421263 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
VARS2-202ENST00000421263 SMIM27A0A1W2PRY6 76 aa11.73□□□□□ -0.53
VARS2-202ENST00000421263 LINC00862A6NCI5 91 aa11.73□□□□□ -0.53
VARS2-202ENST00000421263 COX7A2LO14548 114 aa11.73□□□□□ -0.53
VARS2-202ENST00000421263 C20orf78Q9BR46 151 aa11.73□□□□□ -0.53
VARS2-202ENST00000421263 LOC107984640A0A0U1RRK4 108 aa11.72□□□□□ -0.53
VARS2-202ENST00000421263 C9JQL5 133 aa11.72□□□□□ -0.53
VARS2-202ENST00000421263 KRTAP10-8P60410 259 aa11.72□□□□□ -0.53
VARS2-202ENST00000421263 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
VARS2-202ENST00000421263 RNASE13Q5GAN3 156 aaKnown RBP11.72□□□□□ -0.53
VARS2-202ENST00000421263 Q6ZRP5 223 aa11.72□□□□□ -0.53
VARS2-202ENST00000421263 C2orf48Q96LS8 159 aa11.72□□□□□ -0.53
VARS2-202ENST00000421263 A0A0J9YXV3 536 aa11.71□□□□□ -0.53
VARS2-202ENST00000421263 MALP21145 153 aa11.71□□□□□ -0.53
VARS2-202ENST00000421263 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
VARS2-202ENST00000421263 GAGE2BQ13066 116 aa11.7□□□□□ -0.54
VARS2-202ENST00000421263 FAM104AQ969W3 186 aa11.7□□□□□ -0.54
VARS2-202ENST00000421263 TMEM18Q96B42 140 aa11.7□□□□□ -0.54
VARS2-202ENST00000421263 NAT8Q9UHE5 227 aa11.7□□□□□ -0.54
VARS2-202ENST00000421263 A0A1B0GW15 77 aa11.69□□□□□ -0.54
VARS2-202ENST00000421263 A0A1W2PNN7 141 aa11.69□□□□□ -0.54
VARS2-202ENST00000421263 ADIRFQ15847 76 aa11.69□□□□□ -0.54
VARS2-202ENST00000421263 Q6ZUT4 128 aa11.69□□□□□ -0.54
VARS2-202ENST00000421263 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
VARS2-202ENST00000421263 CAMK2N2Q96S95 79 aa11.69□□□□□ -0.54
VARS2-202ENST00000421263 TCAPO15273 167 aa11.68□□□□□ -0.54
VARS2-202ENST00000421263 APOMO95445 188 aa11.68□□□□□ -0.54
VARS2-202ENST00000421263 A0A1B0GVG6 124 aa11.67□□□□□ -0.54
VARS2-202ENST00000421263 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.67□□□□□ -0.54
VARS2-202ENST00000421263 TNFRSF6BO95407 300 aa11.67□□□□□ -0.54
VARS2-202ENST00000421263 CKS2P33552 79 aa11.67□□□□□ -0.54
VARS2-202ENST00000421263 SRSF3P84103 164 aaKnown RBP11.67□□□□□ -0.54
VARS2-202ENST00000421263 RNF151Q2KHN1 245 aa11.67□□□□□ -0.54
VARS2-202ENST00000421263 REG3GQ6UW15 175 aa11.67□□□□□ -0.54
VARS2-202ENST00000421263 RPL39P62891 51 aaKnown RBP11.66□□□□□ -0.54
VARS2-202ENST00000421263 SMDT1Q9H4I9 107 aa11.66□□□□□ -0.54
VARS2-202ENST00000421263 IGHV3OR16-9A0A0B4J2B5 98 aa11.65□□□□□ -0.54
VARS2-202ENST00000421263 ODF1Q14990 250 aa11.65□□□□□ -0.54
VARS2-202ENST00000421263 PEA15Q15121 130 aa11.65□□□□□ -0.54
VARS2-202ENST00000421263 RNF213Q63HN8 5207 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms