RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 C10orf91Q5T1B1 145 aa10.36□□□□□ -0.75
VAT1-202ENST00000420567 MRPL52Q86TS9 123 aaKnown RBP10.36□□□□□ -0.75
VAT1-202ENST00000420567 CARHSP1Q9Y2V2 147 aaKnown RBP10.36□□□□□ -0.75
VAT1-202ENST00000420567 TCAPO15273 167 aa10.35□□□□□ -0.75
VAT1-202ENST00000420567 PRSS1P07477 247 aa10.35□□□□□ -0.75
VAT1-202ENST00000420567 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
VAT1-202ENST00000420567 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
VAT1-202ENST00000420567 UBE2D4Q9Y2X8 147 aa10.35□□□□□ -0.75
VAT1-202ENST00000420567 HSPG2P98160 4391 aa10.34□□□□□ -0.75
VAT1-202ENST00000420567 CLRN3Q8NCR9 226 aa10.34□□□□□ -0.75
VAT1-202ENST00000420567 CDC42SE2Q9NRR3 84 aa10.34□□□□□ -0.75
VAT1-202ENST00000420567 FAM30AQ9NZY2 134 aa10.34□□□□□ -0.75
VAT1-202ENST00000420567 LOC389332A0A1B0GUA5 103 aa10.33□□□□□ -0.76
VAT1-202ENST00000420567 S100PP25815 95 aa10.33□□□□□ -0.76
VAT1-202ENST00000420567 RNASE13Q5GAN3 156 aaKnown RBP10.33□□□□□ -0.76
VAT1-202ENST00000420567 ZNF664Q8N3J9 261 aa10.33□□□□□ -0.76
VAT1-202ENST00000420567 KRTAP4-5Q9BYR2 181 aa10.33□□□□□ -0.76
VAT1-202ENST00000420567 RPS10P5Q9NQ39 176 aa10.33□□□□□ -0.76
VAT1-202ENST00000420567 LINC00959A0A1B0GUT2 108 aa10.32□□□□□ -0.76
VAT1-202ENST00000420567 XCL1P47992 114 aa10.32□□□□□ -0.76
VAT1-202ENST00000420567 RPL39P62891 51 aaKnown RBP10.32□□□□□ -0.76
VAT1-202ENST00000420567 RHEBQ15382 184 aa10.32□□□□□ -0.76
VAT1-202ENST00000420567 Q6ZUT4 128 aa10.32□□□□□ -0.76
VAT1-202ENST00000420567 TMEM18Q96B42 140 aa10.32□□□□□ -0.76
VAT1-202ENST00000420567 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
VAT1-202ENST00000420567 TRAV9-1A0A075B6T8 112 aa10.31□□□□□ -0.76
VAT1-202ENST00000420567 hDV102S1A0JD36 115 aa10.31□□□□□ -0.76
VAT1-202ENST00000420567 CCL25O15444 150 aa10.31□□□□□ -0.76
VAT1-202ENST00000420567 SMAGPQ0VAQ4 97 aa10.31□□□□□ -0.76
VAT1-202ENST00000420567 Q8N1X5 172 aa10.31□□□□□ -0.76
VAT1-202ENST00000420567 MAP1LC3AQ9H492 121 aa10.31□□□□□ -0.76
VAT1-202ENST00000420567 ABCA13Q86UQ4 5058 aa10.3□□□□□ -0.76
VAT1-202ENST00000420567 APOC3P02656 99 aa10.3□□□□□ -0.76
VAT1-202ENST00000420567 RAB5AP20339 215 aa10.3□□□□□ -0.76
VAT1-202ENST00000420567 FOXI1Q12951 378 aa10.3□□□□□ -0.76
VAT1-202ENST00000420567 KIAA1644Q3SXP7 199 aa10.3□□□□□ -0.76
VAT1-202ENST00000420567 C15orf56Q8N910 161 aa10.3□□□□□ -0.76
VAT1-202ENST00000420567 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
VAT1-202ENST00000420567 SS18Q15532 418 aa10.29□□□□□ -0.76
VAT1-202ENST00000420567 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
VAT1-202ENST00000420567 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
VAT1-202ENST00000420567 HIGD2BQ4VC39 106 aa10.28□□□□□ -0.76
VAT1-202ENST00000420567 Q6ZSA8 131 aa10.28□□□□□ -0.76
VAT1-202ENST00000420567 Q8N8P6 123 aa10.28□□□□□ -0.76
VAT1-202ENST00000420567 TRAV13-1A0A0B4J241 112 aa10.27□□□□□ -0.77
VAT1-202ENST00000420567 SMR3BP02814 79 aaPredicted RBP10.27□□□□□ -0.77
VAT1-202ENST00000420567 NDUFA5Q16718 116 aa10.27□□□□□ -0.77
VAT1-202ENST00000420567 OPRPNQ99935 248 aaPredicted RBP10.27□□□□□ -0.77
VAT1-202ENST00000420567 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
VAT1-202ENST00000420567 PCLOQ9Y6V0 5065 aa10.27□□□□□ -0.77
VAT1-202ENST00000420567 CFAP161Q6P656 301 aa10.26□□□□□ -0.77
VAT1-202ENST00000420567 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
VAT1-202ENST00000420567 GNB1LQ9BYB4 327 aa10.26□□□□□ -0.77
VAT1-202ENST00000420567 AP5S1Q9NUS5 200 aa10.26□□□□□ -0.77
VAT1-202ENST00000420567 DNAH8Q96JB1 4490 aa10.25□□□□□ -0.77
VAT1-202ENST00000420567 SNAPINO95295 136 aa10.25□□□□□ -0.77
VAT1-202ENST00000420567 SLPIP03973 132 aa10.25□□□□□ -0.77
VAT1-202ENST00000420567 CNBPP62633 177 aaKnown RBP10.25□□□□□ -0.77
VAT1-202ENST00000420567 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
VAT1-202ENST00000420567 SVBPQ8N300 66 aa10.25□□□□□ -0.77
VAT1-202ENST00000420567 C9orf163Q8N9P6 203 aa10.25□□□□□ -0.77
VAT1-202ENST00000420567 TGIF2-C20orf24A0A0A6YYL0 155 aa10.24□□□□□ -0.77
VAT1-202ENST00000420567 C1orf196B1AJZ1 125 aa10.24□□□□□ -0.77
VAT1-202ENST00000420567 IFI27P40305 119 aaPredicted RBP10.24□□□□□ -0.77
VAT1-202ENST00000420567 GVQW2A0A096LPI5 108 aaPredicted RBP10.23□□□□□ -0.77
VAT1-202ENST00000420567 EPM2AB3EWF7 344 aa10.23□□□□□ -0.77
VAT1-202ENST00000420567 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
VAT1-202ENST00000420567 SCXQ7RTU7 201 aa10.23□□□□□ -0.77
VAT1-202ENST00000420567 MRPL18Q9H0U6 180 aaKnown RBP10.23□□□□□ -0.77
VAT1-202ENST00000420567 NXT2Q9NPJ8 142 aaKnown RBP10.23□□□□□ -0.77
VAT1-202ENST00000420567 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
VAT1-202ENST00000420567 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
VAT1-202ENST00000420567 COX19Q49B96 90 aa10.22□□□□□ -0.77
VAT1-202ENST00000420567 ORMDL2Q53FV1 153 aa10.22□□□□□ -0.77
VAT1-202ENST00000420567 Q5VSD8 79 aa10.22□□□□□ -0.77
VAT1-202ENST00000420567 C2orf66Q6UXQ4 117 aa10.22□□□□□ -0.77
VAT1-202ENST00000420567 LINC00526Q96FQ7 95 aa10.22□□□□□ -0.77
VAT1-202ENST00000420567 CYSLTR1Q9Y271 337 aa10.22□□□□□ -0.77
VAT1-202ENST00000420567 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.77
VAT1-202ENST00000420567 MT-ND6P03923 174 aa10.21□□□□□ -0.77
VAT1-202ENST00000420567 FABP9Q0Z7S8 132 aa10.21□□□□□ -0.77
VAT1-202ENST00000420567 ALKBH7Q9BT30 221 aaPredicted RBP10.21□□□□□ -0.77
VAT1-202ENST00000420567 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
VAT1-202ENST00000420567 COX7A2LO14548 114 aa10.2□□□□□ -0.78
VAT1-202ENST00000420567 MALP21145 153 aa10.2□□□□□ -0.78
VAT1-202ENST00000420567 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
VAT1-202ENST00000420567 CHAC1Q9BUX1 264 aa10.2□□□□□ -0.78
VAT1-202ENST00000420567 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
VAT1-202ENST00000420567 IGHV3-64A0A075B6Q5 118 aa10.19□□□□□ -0.78
VAT1-202ENST00000420567 PANO1I0J062 215 aa10.19□□□□□ -0.78
VAT1-202ENST00000420567 K7EMI3 77 aa10.19□□□□□ -0.78
VAT1-202ENST00000420567 SDIM1Q6ZPB5 146 aa10.19□□□□□ -0.78
VAT1-202ENST00000420567 PRSS3P2Q8NHM4 247 aa10.19□□□□□ -0.78
VAT1-202ENST00000420567 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
VAT1-202ENST00000420567 TMEM141Q96I45 108 aa10.19□□□□□ -0.78
VAT1-202ENST00000420567 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.19□□□□□ -0.78
VAT1-202ENST00000420567 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
VAT1-202ENST00000420567 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
VAT1-202ENST00000420567 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
VAT1-202ENST00000420567 TEX43Q6ZNM6 134 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms