RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 SMAGPQ0VAQ4 97 aa11.99□□□□□ -0.49
ECHDC3-202ENST00000420401 C14orf177Q52M58 125 aa11.99□□□□□ -0.49
ECHDC3-202ENST00000420401 IGLV10-54A0A075B6I4 117 aa11.98□□□□□ -0.49
ECHDC3-202ENST00000420401 NPYP01303 97 aa11.98□□□□□ -0.49
ECHDC3-202ENST00000420401 OR5A1Q8NGJ0 315 aa11.98□□□□□ -0.49
ECHDC3-202ENST00000420401 PRELID3AQ96N28 172 aa11.98□□□□□ -0.49
ECHDC3-202ENST00000420401 RHEBQ15382 184 aa11.97□□□□□ -0.49
ECHDC3-202ENST00000420401 MRPL52Q86TS9 123 aaKnown RBP11.97□□□□□ -0.49
ECHDC3-202ENST00000420401 SMIM2Q9BVW6 85 aa11.97□□□□□ -0.49
ECHDC3-202ENST00000420401 LAMTOR2Q9Y2Q5 125 aa11.97□□□□□ -0.49
ECHDC3-202ENST00000420401 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.49
ECHDC3-202ENST00000420401 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
ECHDC3-202ENST00000420401 KRTAP26-1Q6PEX3 210 aa11.96□□□□□ -0.49
ECHDC3-202ENST00000420401 CLRN3Q8NCR9 226 aa11.96□□□□□ -0.49
ECHDC3-202ENST00000420401 TMEM18Q96B42 140 aa11.96□□□□□ -0.49
ECHDC3-202ENST00000420401 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.95□□□□□ -0.5
ECHDC3-202ENST00000420401 KRTAP10-1P60331 282 aa11.95□□□□□ -0.5
ECHDC3-202ENST00000420401 RPS10P5Q9NQ39 176 aa11.95□□□□□ -0.5
ECHDC3-202ENST00000420401 USP17L23D6RBM5 183 aa11.94□□□□□ -0.5
ECHDC3-202ENST00000420401 NDUFA5Q16718 116 aa11.94□□□□□ -0.5
ECHDC3-202ENST00000420401 RAB5AP20339 215 aa11.93□□□□□ -0.5
ECHDC3-202ENST00000420401 ZNF664Q8N3J9 261 aa11.93□□□□□ -0.5
ECHDC3-202ENST00000420401 CDC42SE2Q9NRR3 84 aa11.93□□□□□ -0.5
ECHDC3-202ENST00000420401 CSDC2Q9Y534 153 aaKnown RBP11.93□□□□□ -0.5
ECHDC3-202ENST00000420401 PRSS47A8MTI9 375 aa11.92□□□□□ -0.5
ECHDC3-202ENST00000420401 APOC3P02656 99 aa11.92□□□□□ -0.5
ECHDC3-202ENST00000420401 Q5VSD8 79 aa11.92□□□□□ -0.5
ECHDC3-202ENST00000420401 CHCHD10Q8WYQ3 142 aaPredicted RBP11.92□□□□□ -0.5
ECHDC3-202ENST00000420401 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
ECHDC3-202ENST00000420401 UBE2D4Q9Y2X8 147 aa11.92□□□□□ -0.5
ECHDC3-202ENST00000420401 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
ECHDC3-202ENST00000420401 SVBPQ8N300 66 aa11.91□□□□□ -0.5
ECHDC3-202ENST00000420401 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
ECHDC3-202ENST00000420401 LOC389332A0A1B0GUA5 103 aa11.9□□□□□ -0.5
ECHDC3-202ENST00000420401 SNAPINO95295 136 aa11.9□□□□□ -0.5
ECHDC3-202ENST00000420401 COX19Q49B96 90 aa11.9□□□□□ -0.5
ECHDC3-202ENST00000420401 GNB1LQ9BYB4 327 aa11.9□□□□□ -0.5
ECHDC3-202ENST00000420401 LINC00959A0A1B0GUT2 108 aa11.89□□□□□ -0.51
ECHDC3-202ENST00000420401 SS18Q15532 418 aa11.89□□□□□ -0.51
ECHDC3-202ENST00000420401 CFAP161Q6P656 301 aa11.89□□□□□ -0.51
ECHDC3-202ENST00000420401 PRSS1P07477 247 aa11.88□□□□□ -0.51
ECHDC3-202ENST00000420401 Q8N8P6 123 aa11.88□□□□□ -0.51
ECHDC3-202ENST00000420401 CCL25O15444 150 aa11.87□□□□□ -0.51
ECHDC3-202ENST00000420401 XGP55808 180 aa11.87□□□□□ -0.51
ECHDC3-202ENST00000420401 RPL39P62891 51 aaKnown RBP11.87□□□□□ -0.51
ECHDC3-202ENST00000420401 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
ECHDC3-202ENST00000420401 FLG2Q5D862 2391 aaPredicted RBP11.87□□□□□ -0.51
ECHDC3-202ENST00000420401 SRRM2Q9UQ35 2752 aaKnown RBP11.87□□□□□ -0.51
ECHDC3-202ENST00000420401 XCL1P47992 114 aa11.86□□□□□ -0.51
ECHDC3-202ENST00000420401 hDV102S1A0JD36 115 aa11.85□□□□□ -0.51
ECHDC3-202ENST00000420401 K7EMI3 77 aa11.85□□□□□ -0.51
ECHDC3-202ENST00000420401 MT-ND6P03923 174 aa11.85□□□□□ -0.51
ECHDC3-202ENST00000420401 KIAA1644Q3SXP7 199 aa11.85□□□□□ -0.51
ECHDC3-202ENST00000420401 NXT2Q9NPJ8 142 aaKnown RBP11.85□□□□□ -0.51
ECHDC3-202ENST00000420401 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
ECHDC3-202ENST00000420401 DNAH8Q96JB1 4490 aa11.85□□□□□ -0.51
ECHDC3-202ENST00000420401 MYCBP2O75592 4640 aa11.84□□□□□ -0.51
ECHDC3-202ENST00000420401 C1orf196B1AJZ1 125 aa11.84□□□□□ -0.51
ECHDC3-202ENST00000420401 FOXI1Q12951 378 aa11.84□□□□□ -0.51
ECHDC3-202ENST00000420401 ORMDL2Q53FV1 153 aa11.84□□□□□ -0.51
ECHDC3-202ENST00000420401 FAT1Q14517 4588 aa11.84□□□□□ -0.51
ECHDC3-202ENST00000420401 VPS13BQ7Z7G8 4022 aa11.83□□□□□ -0.51
ECHDC3-202ENST00000420401 IFI27P40305 119 aaPredicted RBP11.83□□□□□ -0.52
ECHDC3-202ENST00000420401 MRPS36P82909 103 aaKnown RBP11.83□□□□□ -0.52
ECHDC3-202ENST00000420401 LINC01620Q4KN68 170 aa11.83□□□□□ -0.52
ECHDC3-202ENST00000420401 RNASE13Q5GAN3 156 aaKnown RBP11.83□□□□□ -0.52
ECHDC3-202ENST00000420401 CD164L2Q6UWJ8 174 aa11.83□□□□□ -0.52
ECHDC3-202ENST00000420401 Q6ZUT4 128 aa11.83□□□□□ -0.52
ECHDC3-202ENST00000420401 TRAV13-1A0A0B4J241 112 aa11.82□□□□□ -0.52
ECHDC3-202ENST00000420401 J3QL48 77 aa11.82□□□□□ -0.52
ECHDC3-202ENST00000420401 FABP9Q0Z7S8 132 aa11.82□□□□□ -0.52
ECHDC3-202ENST00000420401 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
ECHDC3-202ENST00000420401 PYGO1Q9Y3Y4 419 aa11.82□□□□□ -0.52
ECHDC3-202ENST00000420401 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
ECHDC3-202ENST00000420401 SMR3BP02814 79 aaPredicted RBP11.81□□□□□ -0.52
ECHDC3-202ENST00000420401 G0S2P27469 103 aa11.81□□□□□ -0.52
ECHDC3-202ENST00000420401 CNBPP62633 177 aaKnown RBP11.81□□□□□ -0.52
ECHDC3-202ENST00000420401 C15orf56Q8N910 161 aa11.81□□□□□ -0.52
ECHDC3-202ENST00000420401 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.8□□□□□ -0.52
ECHDC3-202ENST00000420401 TGIF2-C20orf24A0A0A6YYL0 155 aa11.8□□□□□ -0.52
ECHDC3-202ENST00000420401 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
ECHDC3-202ENST00000420401 FAM30AQ9NZY2 134 aa11.8□□□□□ -0.52
ECHDC3-202ENST00000420401 CYSLTR1Q9Y271 337 aa11.8□□□□□ -0.52
ECHDC3-202ENST00000420401 IGHV1-58A0A0C4DH39 117 aa11.79□□□□□ -0.52
ECHDC3-202ENST00000420401 C2orf66Q6UXQ4 117 aa11.79□□□□□ -0.52
ECHDC3-202ENST00000420401 C9orf163Q8N9P6 203 aa11.79□□□□□ -0.52
ECHDC3-202ENST00000420401 PRSS3P2Q8NHM4 247 aa11.79□□□□□ -0.52
ECHDC3-202ENST00000420401 OPRPNQ99935 248 aaPredicted RBP11.79□□□□□ -0.52
ECHDC3-202ENST00000420401 Q6ZSA8 131 aa11.78□□□□□ -0.52
ECHDC3-202ENST00000420401 FAM104AQ969W3 186 aa11.78□□□□□ -0.52
ECHDC3-202ENST00000420401 TRAPPC1Q9Y5R8 145 aa11.78□□□□□ -0.52
ECHDC3-202ENST00000420401 GVQW2A0A096LPI5 108 aaPredicted RBP11.77□□□□□ -0.53
ECHDC3-202ENST00000420401 COX7A2LO14548 114 aa11.77□□□□□ -0.53
ECHDC3-202ENST00000420401 MALP21145 153 aa11.77□□□□□ -0.53
ECHDC3-202ENST00000420401 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.53
ECHDC3-202ENST00000420401 SLC7A5P1Q8MH63 180 aa11.77□□□□□ -0.53
ECHDC3-202ENST00000420401 TMEM141Q96I45 108 aa11.77□□□□□ -0.53
ECHDC3-202ENST00000420401 IFITM10A6NMD0 228 aa11.76□□□□□ -0.53
ECHDC3-202ENST00000420401 IGLV4-3A0A075B6K6 122 aa11.75□□□□□ -0.53
ECHDC3-202ENST00000420401 SLPIP03973 132 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms