RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 AMN1Q8IY45 258 aa12.93□□□□□ -0.34
MCF2L-212ENST00000420013 ESDP10768 282 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 RAB4AP20338 218 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 RAB14P61106 215 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 HIGD2BQ4VC39 106 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 NUP35Q8NFH5 326 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 C7orf33Q8WU49 177 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 ISOC2Q96AB3 205 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 NAT8Q9UHE5 227 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 NAT8BQ9UHF3 227 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 V9GYV3 84 aa12.92□□□□□ -0.34
MCF2L-212ENST00000420013 C9JQL5 133 aa12.91□□□□□ -0.34
MCF2L-212ENST00000420013 GAS8-AS1O95177 125 aa12.91□□□□□ -0.34
MCF2L-212ENST00000420013 PPP1R17O96001 155 aa12.91□□□□□ -0.34
MCF2L-212ENST00000420013 FCER1GP30273 86 aa12.91□□□□□ -0.34
MCF2L-212ENST00000420013 SRSF3P84103 164 aaKnown RBP12.91□□□□□ -0.34
MCF2L-212ENST00000420013 FOXI1Q12951 378 aa12.91□□□□□ -0.34
MCF2L-212ENST00000420013 TSHBP01222 138 aa12.9□□□□□ -0.34
MCF2L-212ENST00000420013 RPL23P62829 140 aaKnown RBP12.9□□□□□ -0.34
MCF2L-212ENST00000420013 COX6A2Q02221 97 aa12.9□□□□□ -0.34
MCF2L-212ENST00000420013 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
MCF2L-212ENST00000420013 PLA2G2DQ9UNK4 145 aa12.9□□□□□ -0.34
MCF2L-212ENST00000420013 TRBV27A0A0K0K1C4 114 aa12.89□□□□□ -0.35
MCF2L-212ENST00000420013 XCL1P47992 114 aa12.89□□□□□ -0.35
MCF2L-212ENST00000420013 IGHV1-58A0A0C4DH39 117 aa12.88□□□□□ -0.35
MCF2L-212ENST00000420013 C7orf77A4D0Y5 90 aa12.88□□□□□ -0.35
MCF2L-212ENST00000420013 SMKR1H3BMG3 65 aa12.88□□□□□ -0.35
MCF2L-212ENST00000420013 VCYO14598 125 aa12.88□□□□□ -0.35
MCF2L-212ENST00000420013 POLR2KP53803 58 aaKnown RBP12.88□□□□□ -0.35
MCF2L-212ENST00000420013 IFITM2Q01629 132 aa12.88□□□□□ -0.35
MCF2L-212ENST00000420013 LINC00959A0A1B0GUT2 108 aa12.87□□□□□ -0.35
MCF2L-212ENST00000420013 CCL25O15444 150 aa12.87□□□□□ -0.35
MCF2L-212ENST00000420013 CAMPP49913 170 aa12.87□□□□□ -0.35
MCF2L-212ENST00000420013 SMAGPQ0VAQ4 97 aa12.87□□□□□ -0.35
MCF2L-212ENST00000420013 SS18Q15532 418 aa12.87□□□□□ -0.35
MCF2L-212ENST00000420013 CLLU1Q5K131 121 aa12.87□□□□□ -0.35
MCF2L-212ENST00000420013 KIR2DL4Q99706 377 aa12.87□□□□□ -0.35
MCF2L-212ENST00000420013 LINC00474Q9P2X8 69 aa12.87□□□□□ -0.35
MCF2L-212ENST00000420013 PHOX2AO14813 284 aa12.86□□□□□ -0.35
MCF2L-212ENST00000420013 MAJINQ3KP22 176 aa12.86□□□□□ -0.35
MCF2L-212ENST00000420013 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
MCF2L-212ENST00000420013 IGKV2-24A0A0C4DH68 120 aa12.85□□□□□ -0.35
MCF2L-212ENST00000420013 MT1HL1P0DM35 61 aa12.85□□□□□ -0.35
MCF2L-212ENST00000420013 SUMO2P61956 95 aaKnown RBP12.85□□□□□ -0.35
MCF2L-212ENST00000420013 PPP1R2P9O14990 202 aa12.84□□□□□ -0.35
MCF2L-212ENST00000420013 CD164L2Q6UWJ8 174 aa12.84□□□□□ -0.35
MCF2L-212ENST00000420013 ZNF664Q8N3J9 261 aa12.84□□□□□ -0.35
MCF2L-212ENST00000420013 CARD19Q96LW7 228 aa12.84□□□□□ -0.35
MCF2L-212ENST00000420013 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
MCF2L-212ENST00000420013 A0A1B0GW15 77 aa12.83□□□□□ -0.36
MCF2L-212ENST00000420013 STPG4Q8N801 248 aa12.83□□□□□ -0.36
MCF2L-212ENST00000420013 A0A096LNI7 61 aa12.82□□□□□ -0.36
MCF2L-212ENST00000420013 SMIM27A0A1W2PRY6 76 aa12.82□□□□□ -0.36
MCF2L-212ENST00000420013 S100A8P05109 93 aa12.82□□□□□ -0.36
MCF2L-212ENST00000420013 CKS2P33552 79 aa12.82□□□□□ -0.36
MCF2L-212ENST00000420013 MRPL51Q4U2R6 128 aaKnown RBP12.82□□□□□ -0.36
MCF2L-212ENST00000420013 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
MCF2L-212ENST00000420013 CSDC2Q9Y534 153 aaKnown RBP12.82□□□□□ -0.36
MCF2L-212ENST00000420013 PRR3P79522 188 aaKnown RBP12.81□□□□□ -0.36
MCF2L-212ENST00000420013 NRACQ8N912 160 aa12.81□□□□□ -0.36
MCF2L-212ENST00000420013 TMEM18Q96B42 140 aa12.81□□□□□ -0.36
MCF2L-212ENST00000420013 F8W036 122 aa12.8□□□□□ -0.36
MCF2L-212ENST00000420013 ZNF561-AS1K7EIQ3 104 aa12.8□□□□□ -0.36
MCF2L-212ENST00000420013 MRPL54Q6P161 138 aaKnown RBP12.8□□□□□ -0.36
MCF2L-212ENST00000420013 LINC00862A6NCI5 91 aa12.79□□□□□ -0.36
MCF2L-212ENST00000420013 MALP21145 153 aa12.79□□□□□ -0.36
MCF2L-212ENST00000420013 C1orf196B1AJZ1 125 aa12.78□□□□□ -0.36
MCF2L-212ENST00000420013 HBBP68871 147 aa12.78□□□□□ -0.36
MCF2L-212ENST00000420013 SYCNQ0VAF6 134 aa12.78□□□□□ -0.36
MCF2L-212ENST00000420013 C20orf78Q9BR46 151 aa12.78□□□□□ -0.36
MCF2L-212ENST00000420013 TCAPO15273 167 aa12.77□□□□□ -0.37
MCF2L-212ENST00000420013 UBE2D4Q9Y2X8 147 aa12.77□□□□□ -0.37
MCF2L-212ENST00000420013 TNXBP22105 4242 aa12.76□□□□□ -0.37
MCF2L-212ENST00000420013 TRAV13-1A0A0B4J241 112 aa12.76□□□□□ -0.37
MCF2L-212ENST00000420013 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
MCF2L-212ENST00000420013 LINC00526Q96FQ7 95 aa12.76□□□□□ -0.37
MCF2L-212ENST00000420013 TIMM21Q9BVV7 248 aa12.76□□□□□ -0.37
MCF2L-212ENST00000420013 COX7A2LO14548 114 aa12.75□□□□□ -0.37
MCF2L-212ENST00000420013 TNFRSF6BO95407 300 aa12.75□□□□□ -0.37
MCF2L-212ENST00000420013 RPL32P62910 135 aaKnown RBP12.75□□□□□ -0.37
MCF2L-212ENST00000420013 PNRC1Q12796 327 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-212ENST00000420013 D6R8Y8 96 aa12.74□□□□□ -0.37
MCF2L-212ENST00000420013 IGLV4-69A0A075B6H9 119 aa12.73□□□□□ -0.37
MCF2L-212ENST00000420013 TRBV24-1A0A075B6N3 115 aa12.73□□□□□ -0.37
MCF2L-212ENST00000420013 LOC107984640A0A0U1RRK4 108 aa12.73□□□□□ -0.37
MCF2L-212ENST00000420013 UQCC3Q6UW78 93 aa12.73□□□□□ -0.37
MCF2L-212ENST00000420013 PPBPP02775 128 aa12.72□□□□□ -0.37
MCF2L-212ENST00000420013 PTTG1IPP53801 180 aa12.72□□□□□ -0.37
MCF2L-212ENST00000420013 Q6ZUT4 128 aa12.72□□□□□ -0.37
MCF2L-212ENST00000420013 C2orf48Q96LS8 159 aa12.72□□□□□ -0.37
MCF2L-212ENST00000420013 SMIM2Q9BVW6 85 aa12.72□□□□□ -0.37
MCF2L-212ENST00000420013 UBR4Q5T4S7 5183 aa12.71□□□□□ -0.37
MCF2L-212ENST00000420013 APOMO95445 188 aa12.71□□□□□ -0.37
MCF2L-212ENST00000420013 LINC01600Q96MT4 127 aa12.71□□□□□ -0.37
MCF2L-212ENST00000420013 RAB5AP20339 215 aa12.7□□□□□ -0.38
MCF2L-212ENST00000420013 SPINK6Q6UWN8 80 aa12.7□□□□□ -0.38
MCF2L-212ENST00000420013 Q6ZRP5 223 aa12.7□□□□□ -0.38
MCF2L-212ENST00000420013 ATP5L2Q7Z4Y8 100 aa12.7□□□□□ -0.38
MCF2L-212ENST00000420013 ORMDL3Q8N138 153 aa12.7□□□□□ -0.38
MCF2L-212ENST00000420013 CAMK2N2Q96S95 79 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms