RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PLA2G2AP14555 144 aa8.39□□□□□ -1.07
PTCH1-205ENST00000418258 GDF5OSQ5U4N7 250 aa8.39□□□□□ -1.07
PTCH1-205ENST00000418258 C10orf99Q6UWK7 81 aa8.39□□□□□ -1.07
PTCH1-205ENST00000418258 DCANP1Q8TF63 244 aa8.39□□□□□ -1.07
PTCH1-205ENST00000418258 K7ERS5 55 aa8.39□□□□□ -1.07
PTCH1-205ENST00000418258 CDPF1Q6NVV7 123 aa8.39□□□□□ -1.07
PTCH1-205ENST00000418258 BBC3Q96PG8 261 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-205ENST00000418258 SYCNQ0VAF6 134 aa8.38□□□□□ -1.07
PTCH1-205ENST00000418258 A0A0J9YWU9 116 aa8.38□□□□□ -1.07
PTCH1-205ENST00000418258 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
PTCH1-205ENST00000418258 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
PTCH1-205ENST00000418258 C19orf71A6NCJ1 209 aa8.38□□□□□ -1.07
PTCH1-205ENST00000418258 H3BT86 120 aa8.37□□□□□ -1.07
PTCH1-205ENST00000418258 C1orf158Q8N1D5 194 aa8.37□□□□□ -1.07
PTCH1-205ENST00000418258 C3orf22Q8N5N4 141 aa8.37□□□□□ -1.07
PTCH1-205ENST00000418258 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-205ENST00000418258 LY6LH3BQJ8 138 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 SCXQ7RTU7 201 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 SLPIP03973 132 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
PTCH1-205ENST00000418258 CLUHP3Q96NS8 147 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 WFDC10AQ9H1F0 79 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 IGLV9-49A0A0B4J1Y8 123 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 Q8N976 141 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 C2CD3Q4AC94 2353 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 PROK1P58294 105 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 LINC00322Q6ZN03 302 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-205ENST00000418258 PSMG3-AS1Q96PY0 264 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
PTCH1-205ENST00000418258 C18orf65Q6ZTR6 163 aa8.35□□□□□ -1.07
PTCH1-205ENST00000418258 LINC01006Q8NI28 216 aa8.35□□□□□ -1.07
PTCH1-205ENST00000418258 SPANXB1Q9NS25 103 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-205ENST00000418258 TEX49A0A1B0GTD5 131 aa8.35□□□□□ -1.07
PTCH1-205ENST00000418258 PIK3CD-AS1Q5SR53 167 aa8.35□□□□□ -1.07
PTCH1-205ENST00000418258 TRBV6-4A0A1B0GX49 114 aa8.35□□□□□ -1.07
PTCH1-205ENST00000418258 C3orf84H3BNL1 204 aa8.35□□□□□ -1.07
PTCH1-205ENST00000418258 C11orf71Q6IPW1 123 aa8.35□□□□□ -1.07
PTCH1-205ENST00000418258 ZNF702PQ9H963 129 aa8.35□□□□□ -1.07
PTCH1-205ENST00000418258 TCL1BO95988 128 aa8.34□□□□□ -1.07
PTCH1-205ENST00000418258 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
PTCH1-205ENST00000418258 RPL37AP8A6NKH3 93 aa8.34□□□□□ -1.07
PTCH1-205ENST00000418258 IBA57-AS1B1ANH7 110 aa8.34□□□□□ -1.07
PTCH1-205ENST00000418258 OXLD1Q5BKU9 147 aa8.34□□□□□ -1.07
PTCH1-205ENST00000418258 LINC00574Q9H8X3 128 aa8.34□□□□□ -1.07
PTCH1-205ENST00000418258 SMR3AQ99954 134 aa8.33□□□□□ -1.08
PTCH1-205ENST00000418258 LINC00526Q96FQ7 95 aa8.33□□□□□ -1.08
PTCH1-205ENST00000418258 UBE2D2P62837 147 aa8.33□□□□□ -1.08
PTCH1-205ENST00000418258 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
PTCH1-205ENST00000418258 FRMD6-AS1P0C7T7 363 aa8.33□□□□□ -1.08
PTCH1-205ENST00000418258 FN1P02751 2386 aaKnown RBP8.33□□□□□ -1.08
PTCH1-205ENST00000418258 SDIM1Q6ZPB5 146 aa8.32□□□□□ -1.08
PTCH1-205ENST00000418258 COA6Q5JTJ3 125 aaKnown RBP8.32□□□□□ -1.08
PTCH1-205ENST00000418258 MYO9AB2RTY4 2548 aa8.32□□□□□ -1.08
PTCH1-205ENST00000418258 MPLKIPQ8TAP9 179 aa8.32□□□□□ -1.08
PTCH1-205ENST00000418258 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
PTCH1-205ENST00000418258 NAV2Q8IVL1 2488 aa8.32□□□□□ -1.08
PTCH1-205ENST00000418258 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
PTCH1-205ENST00000418258 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
PTCH1-205ENST00000418258 M0QY20 66 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 LELP1Q5T871 98 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 CCKP06307 115 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 IGLV4-69A0A075B6H9 119 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 TMEM223A0PJW6 202 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 FSTL3O95633 263 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 PTH2Q96A98 100 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 LOC100131303A0A0U1RQF7 123 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 NUPR2A6NF83 97 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 PRR15LQ9BU68 103 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 PLAC8L1A1L4L8 177 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 J3KT08 172 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
PTCH1-205ENST00000418258 IGF2RP11717 2491 aa8.3□□□□□ -1.08
PTCH1-205ENST00000418258 CD164L2Q6UWJ8 174 aa8.3□□□□□ -1.08
PTCH1-205ENST00000418258 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
PTCH1-205ENST00000418258 RBX1P62877 108 aa8.3□□□□□ -1.08
PTCH1-205ENST00000418258 C6orf99Q4VX62 202 aa8.3□□□□□ -1.08
PTCH1-205ENST00000418258 LINC00643Q86TS7 51 aa8.29□□□□□ -1.08
PTCH1-205ENST00000418258 LYPD6Q86Y78 171 aa8.29□□□□□ -1.08
PTCH1-205ENST00000418258 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
PTCH1-205ENST00000418258 LINC00308Q8TCZ7 52 aa8.29□□□□□ -1.08
PTCH1-205ENST00000418258 IGHV4-30-4P0DP06 118 aa8.29□□□□□ -1.08
PTCH1-205ENST00000418258 PRM2P04554 102 aa8.29□□□□□ -1.08
PTCH1-205ENST00000418258 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-205ENST00000418258 DHRS4-AS1Q9P1J3 65 aa8.29□□□□□ -1.08
PTCH1-205ENST00000418258 IGLC6P0CF74 106 aa8.28□□□□□ -1.08
PTCH1-205ENST00000418258 PIEZO1Q92508 2521 aa8.28□□□□□ -1.08
PTCH1-205ENST00000418258 EBI3Q14213 229 aa8.28□□□□□ -1.08
PTCH1-205ENST00000418258 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
PTCH1-205ENST00000418258 MLST8Q9BVC4 326 aa8.28□□□□□ -1.08
PTCH1-205ENST00000418258 Q6ZS46 218 aa8.27□□□□□ -1.08
PTCH1-205ENST00000418258 EP400Q96L91 3159 aa8.27□□□□□ -1.08
PTCH1-205ENST00000418258 TRBV6-5A0A0K0K1A5 114 aa8.27□□□□□ -1.09
PTCH1-205ENST00000418258 M0R378 163 aa8.27□□□□□ -1.09
PTCH1-205ENST00000418258 CIRBP-AS1Q8TBR5 109 aa8.27□□□□□ -1.09
PTCH1-205ENST00000418258 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
PTCH1-205ENST00000418258 SERP1Q9Y6X1 66 aa8.27□□□□□ -1.09
PTCH1-205ENST00000418258 IGLV5-52A0A0A0MRZ9 124 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms