RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 C11orf45Q8TAV5 145 aa14.51□□□□□ -0.09
CASC3-203ENST00000418132 BAALCQ8WXS3 180 aa14.51□□□□□ -0.09
CASC3-203ENST00000418132 BVES-AS1Q5T3Y7 98 aa14.5□□□□□ -0.09
CASC3-203ENST00000418132 ATP6V0E2Q8NHE4 81 aa14.5□□□□□ -0.09
CASC3-203ENST00000418132 PYGO1Q9Y3Y4 419 aa14.5□□□□□ -0.09
CASC3-203ENST00000418132 F8VRH5 84 aa14.49□□□□□ -0.09
CASC3-203ENST00000418132 DLEU1O43261 78 aa14.49□□□□□ -0.09
CASC3-203ENST00000418132 PLNP26678 52 aa14.49□□□□□ -0.09
CASC3-203ENST00000418132 CHTOPQ9Y3Y2 248 aaKnown RBP14.49□□□□□ -0.09
CASC3-203ENST00000418132 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.49□□□□□ -0.09
CASC3-203ENST00000418132 IGKV2-29A2NJV5 120 aaPredicted RBP14.49□□□□□ -0.09
CASC3-203ENST00000418132 LINC00469Q8N7U9 141 aa14.49□□□□□ -0.09
CASC3-203ENST00000418132 NANOS2P60321 138 aaKnown RBP14.48□□□□□ -0.09
CASC3-203ENST00000418132 TMEM97Q5BJF2 176 aa14.48□□□□□ -0.09
CASC3-203ENST00000418132 ZNF25P17030 456 aaPredicted RBP14.47□□□□□ -0.09
CASC3-203ENST00000418132 UBE2D4Q9Y2X8 147 aa14.47□□□□□ -0.09
CASC3-203ENST00000418132 PRSS29PA6NIE9 313 aa14.47□□□□□ -0.09
CASC3-203ENST00000418132 SPANXA1Q9NS26 97 aa14.47□□□□□ -0.09
CASC3-203ENST00000418132 HUWE1Q7Z6Z7 4374 aaKnown RBP14.46□□□□□ -0.09
CASC3-203ENST00000418132 TRBV6-8A0A0A6YYG3 113 aa14.46□□□□□ -0.09
CASC3-203ENST00000418132 NPSP0C0P6 89 aa14.46□□□□□ -0.09
CASC3-203ENST00000418132 TRBV25-1A0A075B6N4 114 aa14.45□□□□□ -0.1
CASC3-203ENST00000418132 SIVA1O15304 175 aa14.45□□□□□ -0.1
CASC3-203ENST00000418132 TMEM243Q9BU79 118 aa14.45□□□□□ -0.1
CASC3-203ENST00000418132 TIMM21Q9BVV7 248 aa14.45□□□□□ -0.1
CASC3-203ENST00000418132 TTTY13Q9BZ97 58 aa14.45□□□□□ -0.1
CASC3-203ENST00000418132 IGLV4-3A0A075B6K6 122 aa14.45□□□□□ -0.1
CASC3-203ENST00000418132 H3BNG1 76 aa14.45□□□□□ -0.1
CASC3-203ENST00000418132 MRPL23Q16540 153 aaKnown RBP14.45□□□□□ -0.1
CASC3-203ENST00000418132 FAM104AQ969W3 186 aa14.45□□□□□ -0.1
CASC3-203ENST00000418132 OPRPNQ99935 248 aaPredicted RBP14.45□□□□□ -0.1
CASC3-203ENST00000418132 CEMP1Q6PRD7 247 aaPredicted RBP14.44□□□□□ -0.1
CASC3-203ENST00000418132 ICOSQ9Y6W8 199 aa14.44□□□□□ -0.1
CASC3-203ENST00000418132 PMVKQ15126 192 aa14.43□□□□□ -0.1
CASC3-203ENST00000418132 A0A096LPF7 62 aa14.43□□□□□ -0.1
CASC3-203ENST00000418132 PAPPA-AS1Q5QFB9 102 aa14.43□□□□□ -0.1
CASC3-203ENST00000418132 Q6ZVH6 145 aa14.43□□□□□ -0.1
CASC3-203ENST00000418132 H7C423 109 aa14.42□□□□□ -0.1
CASC3-203ENST00000418132 SH2D6Q7Z4S9 175 aa14.42□□□□□ -0.1
CASC3-203ENST00000418132 CST9LQ9H4G1 147 aa14.42□□□□□ -0.1
CASC3-203ENST00000418132 CSDC2Q9Y534 153 aaKnown RBP14.42□□□□□ -0.1
CASC3-203ENST00000418132 COL7A1Q02388 2944 aa14.42□□□□□ -0.1
CASC3-203ENST00000418132 DEFB131BA0A096LNP1 70 aa14.42□□□□□ -0.1
CASC3-203ENST00000418132 MEGF8Q7Z7M0 2845 aa14.41□□□□□ -0.1
CASC3-203ENST00000418132 MRPS36P82909 103 aaKnown RBP14.4□□□□□ -0.1
CASC3-203ENST00000418132 SMAGPQ0VAQ4 97 aa14.4□□□□□ -0.1
CASC3-203ENST00000418132 AMELXQ99217 191 aa14.4□□□□□ -0.1
CASC3-203ENST00000418132 DNAH9Q9NYC9 4486 aa14.4□□□□□ -0.1
CASC3-203ENST00000418132 UBE2L6O14933 153 aa14.4□□□□□ -0.1
CASC3-203ENST00000418132 VCX2Q9H322 139 aa14.4□□□□□ -0.1
CASC3-203ENST00000418132 STAB2Q8WWQ8 2551 aa14.39□□□□□ -0.11
CASC3-203ENST00000418132 NHLRC4P0CG21 123 aaPredicted RBP14.39□□□□□ -0.11
CASC3-203ENST00000418132 COX11Q9Y6N1 276 aa14.39□□□□□ -0.11
CASC3-203ENST00000418132 TRAV8-6A0A0B4J262 113 aa14.38□□□□□ -0.11
CASC3-203ENST00000418132 HSD52Q0P140 79 aa14.38□□□□□ -0.11
CASC3-203ENST00000418132 DGAT2L7PQ6IED9 249 aa14.38□□□□□ -0.11
CASC3-203ENST00000418132 Q6ZUT4 128 aa14.38□□□□□ -0.11
CASC3-203ENST00000418132 MAPKAPK5-AS1Q8N8E1 139 aa14.38□□□□□ -0.11
CASC3-203ENST00000418132 IGLV4-69A0A075B6H9 119 aa14.38□□□□□ -0.11
CASC3-203ENST00000418132 TRAV10A0A0B4J240 114 aa14.38□□□□□ -0.11
CASC3-203ENST00000418132 CHCHD5Q9BSY4 110 aa14.38□□□□□ -0.11
CASC3-203ENST00000418132 TAX1BP3O14907 124 aa14.36□□□□□ -0.11
CASC3-203ENST00000418132 AMMECR1LQ6DCA0 310 aa14.36□□□□□ -0.11
CASC3-203ENST00000418132 ORAOV1Q8WV07 137 aa14.36□□□□□ -0.11
CASC3-203ENST00000418132 HIGD1BQ9P298 99 aa14.36□□□□□ -0.11
CASC3-203ENST00000418132 GAGE6Q13070 117 aa14.36□□□□□ -0.11
CASC3-203ENST00000418132 C11orf86A6NJI1 115 aa14.35□□□□□ -0.11
CASC3-203ENST00000418132 SEC11AP67812 179 aa14.35□□□□□ -0.11
CASC3-203ENST00000418132 RNASE13Q5GAN3 156 aaKnown RBP14.35□□□□□ -0.11
CASC3-203ENST00000418132 OR5A1Q8NGJ0 315 aa14.34□□□□□ -0.11
CASC3-203ENST00000418132 CDC42SE2Q9NRR3 84 aa14.34□□□□□ -0.11
CASC3-203ENST00000418132 TMEM101Q96IK0 257 aa14.34□□□□□ -0.11
CASC3-203ENST00000418132 E9PLD3 99 aa14.33□□□□□ -0.12
CASC3-203ENST00000418132 TIRAPP58753 221 aa14.33□□□□□ -0.12
CASC3-203ENST00000418132 CHAC1Q9BUX1 264 aa14.33□□□□□ -0.12
CASC3-203ENST00000418132 LELP1Q5T871 98 aa14.33□□□□□ -0.12
CASC3-203ENST00000418132 LYPD5Q6UWN5 251 aa14.32□□□□□ -0.12
CASC3-203ENST00000418132 NFE4Q86UQ8 179 aa14.32□□□□□ -0.12
CASC3-203ENST00000418132 MYMXA0A1B0GTQ4 84 aa14.3□□□□□ -0.12
CASC3-203ENST00000418132 A0A1B0GUV1 79 aa14.3□□□□□ -0.12
CASC3-203ENST00000418132 IGLV4-60A0A075B6I1 120 aa14.29□□□□□ -0.12
CASC3-203ENST00000418132 A0A0J9YXV3 536 aa14.29□□□□□ -0.12
CASC3-203ENST00000418132 A6NDN8 102 aa14.29□□□□□ -0.12
CASC3-203ENST00000418132 TMEM262E9PQX1 116 aa14.28□□□□□ -0.12
CASC3-203ENST00000418132 UBE2D1P51668 147 aa14.28□□□□□ -0.12
CASC3-203ENST00000418132 PRKDCP78527 4128 aaKnown RBP14.28□□□□□ -0.12
CASC3-203ENST00000418132 GCSHP23434 173 aa14.27□□□□□ -0.12
CASC3-203ENST00000418132 RBX1P62877 108 aa14.27□□□□□ -0.12
CASC3-203ENST00000418132 TMEM170BQ5T4T1 132 aa14.27□□□□□ -0.12
CASC3-203ENST00000418132 C15orf53Q8NAA6 179 aa14.27□□□□□ -0.12
CASC3-203ENST00000418132 HERVK_113P61574 105 aa14.26□□□□□ -0.13
CASC3-203ENST00000418132 TINCRA0A1B0GVN0 87 aa14.25□□□□□ -0.13
CASC3-203ENST00000418132 FAM19A3Q7Z5A8 133 aa14.25□□□□□ -0.13
CASC3-203ENST00000418132 K7EP13 123 aa14.25□□□□□ -0.13
CASC3-203ENST00000418132 FXYD2P54710 66 aa14.25□□□□□ -0.13
CASC3-203ENST00000418132 H3BRM9 83 aa14.24□□□□□ -0.13
CASC3-203ENST00000418132 VAMP3Q15836 100 aa14.24□□□□□ -0.13
CASC3-203ENST00000418132 ESRGQ1W209 222 aa14.24□□□□□ -0.13
CASC3-203ENST00000418132 CEND1Q8N111 149 aa14.24□□□□□ -0.13
CASC3-203ENST00000418132 ZNF815PA8K554 130 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms