RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 CNFNQ9BYD5 112 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 MANBALQ9NQG1 85 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 C1orf196B1AJZ1 125 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 IGLV7-43P04211 117 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 BCL2P10415 239 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 PRR4Q16378 134 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 NUP35Q8NFH5 326 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 NUDT10Q8NFP7 164 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TSKUQ8WUA8 353 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 MRAP2Q96G30 205 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 NUDT11Q96G61 164 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 CAMK2N2Q96S95 79 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 CDC42SE2Q9NRR3 84 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 GNG13Q9P2W3 67 aa4.77□□□□□ -1.65
HLA-DPA1-241ENST00000417724 A0A087WZ39 114 aa4.76□□□□□ -1.65
HLA-DPA1-241ENST00000417724 G3V3Q6 166 aa4.76□□□□□ -1.65
HLA-DPA1-241ENST00000417724 COX7A2LO14548 114 aa4.76□□□□□ -1.65
HLA-DPA1-241ENST00000417724 ESDP10768 282 aa4.76□□□□□ -1.65
HLA-DPA1-241ENST00000417724 RPL18AQ02543 176 aaKnown RBP4.76□□□□□ -1.65
HLA-DPA1-241ENST00000417724 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
HLA-DPA1-241ENST00000417724 MRPL52Q86TS9 123 aaKnown RBP4.76□□□□□ -1.65
HLA-DPA1-241ENST00000417724 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TRAV1-1A0A0B4J248 108 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TRBV6-5A0A0K0K1A5 114 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 H0Y9J4 135 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TEX46H3BTG2 121 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 BCL2L11O43521 198 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 PDE6DO43924 150 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 MEF2BQ02080 365 aaPredicted RBP4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 ZNF345Q14585 488 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 RNF151Q2KHN1 245 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 ST20Q9HBF5 79 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 MED9Q9NWA0 146 aa4.75□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TRBV20OR9-2A0A075B6H5 130 aa4.74□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TSHBP01222 138 aa4.74□□□□□ -1.65
HLA-DPA1-241ENST00000417724 RPL13AP40429 203 aaKnown RBP4.74□□□□□ -1.65
HLA-DPA1-241ENST00000417724 UBE2D1P51668 147 aa4.74□□□□□ -1.65
HLA-DPA1-241ENST00000417724 FOXA3P55318 350 aaPredicted RBP4.74□□□□□ -1.65
HLA-DPA1-241ENST00000417724 SMAGPQ0VAQ4 97 aa4.74□□□□□ -1.65
HLA-DPA1-241ENST00000417724 OPRPNQ99935 248 aaPredicted RBP4.74□□□□□ -1.65
HLA-DPA1-241ENST00000417724 RPP21Q9H633 154 aaKnown RBP4.74□□□□□ -1.65
HLA-DPA1-241ENST00000417724 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
HLA-DPA1-241ENST00000417724 KANTRA0A1W2PQU2 76 aa4.73□□□□□ -1.65
HLA-DPA1-241ENST00000417724 C7orf77A4D0Y5 90 aa4.73□□□□□ -1.65
HLA-DPA1-241ENST00000417724 IMMP2LQ96T52 175 aa4.73□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TMEM242Q9NWH2 141 aa4.73□□□□□ -1.65
HLA-DPA1-241ENST00000417724 CSDC2Q9Y534 153 aaKnown RBP4.73□□□□□ -1.65
HLA-DPA1-241ENST00000417724 MUC2Q02817 5179 aa4.73□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TRAV13-1A0A0B4J241 112 aa4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 TRBV27A0A0K0K1C4 114 aa4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 HMSDA8MTL9 139 aa4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 F8WDY8 70 aa4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 SMLR1H3BR10 107 aa4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 KRTAP1-4P0C5Y4 121 aa4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 POLR2KP53803 58 aaKnown RBP4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 C5orf38Q86SI9 138 aa4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 RNASE7Q9H1E1 156 aaKnown RBP4.72□□□□□ -1.65
HLA-DPA1-241ENST00000417724 A8MWL6 223 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 VCYO14598 125 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 FCER1GP30273 86 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 SPAG11BQ08648 103 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 TMEM241Q24JQ0 296 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 KRTAP11-1Q8IUC1 163 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 OR10D4PQ8NGN7 298 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 OCC1Q8TAD7 63 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 BORCS7Q96B45 105 aa4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 MRPL35Q9NZE8 188 aaKnown RBP4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 CARHSP1Q9Y2V2 147 aaKnown RBP4.71□□□□□ -1.66
HLA-DPA1-241ENST00000417724 FAM168BA1KXE4 195 aa4.7□□□□□ -1.66
HLA-DPA1-241ENST00000417724 K7EN84 100 aa4.7□□□□□ -1.66
HLA-DPA1-241ENST00000417724 GATCO43716 136 aaKnown RBP4.7□□□□□ -1.66
HLA-DPA1-241ENST00000417724 TAGLN2P37802 199 aaKnown RBP4.7□□□□□ -1.66
HLA-DPA1-241ENST00000417724 UBE2BP63146 152 aa4.7□□□□□ -1.66
HLA-DPA1-241ENST00000417724 UBE2D4Q9Y2X8 147 aa4.7□□□□□ -1.66
HLA-DPA1-241ENST00000417724 NDUFA1O15239 70 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 TSPAN13O95857 204 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 PPP1R17O96001 155 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 TLX1NBP0CAT3 122 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 GAGE2EQ4V326 116 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 RNASE13Q5GAN3 156 aaKnown RBP4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 ORAOV1Q8WV07 137 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 TMEM18Q96B42 140 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 KIR2DL4Q99706 377 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 TIMM21Q9BVV7 248 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 TMEM191AQ9H0A3 160 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 GAGE2DQ9UEU5 116 aa4.69□□□□□ -1.66
HLA-DPA1-241ENST00000417724 A0A1B0GUT8 65 aa4.68□□□□□ -1.66
HLA-DPA1-241ENST00000417724 RAB4AP20338 218 aa4.68□□□□□ -1.66
HLA-DPA1-241ENST00000417724 UNQ6190/PRO20217Q6UXQ8 127 aa4.68□□□□□ -1.66
HLA-DPA1-241ENST00000417724 FAM231DQ6ZW35 169 aa4.68□□□□□ -1.66
HLA-DPA1-241ENST00000417724 IGHV3OR16-9A0A0B4J2B5 98 aa4.67□□□□□ -1.66
HLA-DPA1-241ENST00000417724 M0QXV9 152 aa4.67□□□□□ -1.66
HLA-DPA1-241ENST00000417724 ZNF861PO60384 105 aa4.67□□□□□ -1.66
HLA-DPA1-241ENST00000417724 SUMO2P61956 95 aaKnown RBP4.67□□□□□ -1.66
HLA-DPA1-241ENST00000417724 CT83Q5H943 113 aa4.67□□□□□ -1.66
HLA-DPA1-241ENST00000417724 C10orf25Q5T742 122 aa4.67□□□□□ -1.66
HLA-DPA1-241ENST00000417724 Q6ZUT4 128 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms