RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 S100PP25815 95 aa9.94□□□□□ -0.82
NUP50-204ENST00000417702 POLR2KP53803 58 aaKnown RBP9.94□□□□□ -0.82
NUP50-204ENST00000417702 SCXQ7RTU7 201 aa9.94□□□□□ -0.82
NUP50-204ENST00000417702 TMEM101Q96IK0 257 aa9.94□□□□□ -0.82
NUP50-204ENST00000417702 AP5S1Q9NUS5 200 aa9.94□□□□□ -0.82
NUP50-204ENST00000417702 FLG2Q5D862 2391 aaPredicted RBP9.93□□□□□ -0.82
NUP50-204ENST00000417702 TRAV9-1A0A075B6T8 112 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 GAGE12HA6NDE8 117 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 APOC3P02656 99 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 PPBPP02775 128 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
NUP50-204ENST00000417702 CFAP161Q6P656 301 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 NRACQ8N912 160 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 C9orf163Q8N9P6 203 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 RPS10P5Q9NQ39 176 aa9.93□□□□□ -0.82
NUP50-204ENST00000417702 D6R8Y8 96 aa9.92□□□□□ -0.82
NUP50-204ENST00000417702 VCYO14598 125 aa9.92□□□□□ -0.82
NUP50-204ENST00000417702 ESDP10768 282 aa9.92□□□□□ -0.82
NUP50-204ENST00000417702 SUMO2P61956 95 aaKnown RBP9.92□□□□□ -0.82
NUP50-204ENST00000417702 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
NUP50-204ENST00000417702 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
NUP50-204ENST00000417702 TRBV24-1A0A075B6N3 115 aa9.91□□□□□ -0.82
NUP50-204ENST00000417702 SNAPINO95295 136 aa9.91□□□□□ -0.82
NUP50-204ENST00000417702 FCER1GP30273 86 aa9.91□□□□□ -0.82
NUP50-204ENST00000417702 ORMDL3Q8N138 153 aa9.91□□□□□ -0.82
NUP50-204ENST00000417702 SVBPQ8N300 66 aa9.91□□□□□ -0.82
NUP50-204ENST00000417702 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
NUP50-204ENST00000417702 CHCHD10Q8WYQ3 142 aaPredicted RBP9.91□□□□□ -0.82
NUP50-204ENST00000417702 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.9□□□□□ -0.82
NUP50-204ENST00000417702 PHOX2AO14813 284 aa9.9□□□□□ -0.82
NUP50-204ENST00000417702 TNFRSF6BO95407 300 aa9.9□□□□□ -0.82
NUP50-204ENST00000417702 CNBPP62633 177 aaKnown RBP9.9□□□□□ -0.82
NUP50-204ENST00000417702 TMEM136Q6ZRR5 245 aa9.9□□□□□ -0.82
NUP50-204ENST00000417702 KIR2DL4Q99706 377 aa9.9□□□□□ -0.82
NUP50-204ENST00000417702 DNAH8Q96JB1 4490 aa9.89□□□□□ -0.83
NUP50-204ENST00000417702 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
NUP50-204ENST00000417702 TCAPO15273 167 aa9.88□□□□□ -0.83
NUP50-204ENST00000417702 SMAGPQ0VAQ4 97 aa9.88□□□□□ -0.83
NUP50-204ENST00000417702 MRPL52Q86TS9 123 aaKnown RBP9.88□□□□□ -0.83
NUP50-204ENST00000417702 PRELID3AQ96N28 172 aa9.88□□□□□ -0.83
NUP50-204ENST00000417702 NPYP01303 97 aa9.87□□□□□ -0.83
NUP50-204ENST00000417702 COX19Q49B96 90 aa9.87□□□□□ -0.83
NUP50-204ENST00000417702 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
NUP50-204ENST00000417702 LAMTOR2Q9Y2Q5 125 aa9.87□□□□□ -0.83
NUP50-204ENST00000417702 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
NUP50-204ENST00000417702 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
NUP50-204ENST00000417702 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
NUP50-204ENST00000417702 XCL1P47992 114 aa9.86□□□□□ -0.83
NUP50-204ENST00000417702 SS18Q15532 418 aa9.86□□□□□ -0.83
NUP50-204ENST00000417702 ZNF664Q8N3J9 261 aa9.86□□□□□ -0.83
NUP50-204ENST00000417702 C15orf56Q8N910 161 aa9.86□□□□□ -0.83
NUP50-204ENST00000417702 SMIM2Q9BVW6 85 aa9.86□□□□□ -0.83
NUP50-204ENST00000417702 CDC42SE2Q9NRR3 84 aa9.86□□□□□ -0.83
NUP50-204ENST00000417702 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
NUP50-204ENST00000417702 CCL25O15444 150 aa9.85□□□□□ -0.83
NUP50-204ENST00000417702 FOXI1Q12951 378 aa9.85□□□□□ -0.83
NUP50-204ENST00000417702 HIGD2BQ4VC39 106 aa9.85□□□□□ -0.83
NUP50-204ENST00000417702 SLC7A5P1Q8MH63 180 aa9.85□□□□□ -0.83
NUP50-204ENST00000417702 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
NUP50-204ENST00000417702 GNB1LQ9BYB4 327 aa9.85□□□□□ -0.83
NUP50-204ENST00000417702 SLPIP03973 132 aa9.84□□□□□ -0.83
NUP50-204ENST00000417702 MAP1LC3AQ9H492 121 aa9.84□□□□□ -0.83
NUP50-204ENST00000417702 CSDC2Q9Y534 153 aaKnown RBP9.84□□□□□ -0.83
NUP50-204ENST00000417702 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.84□□□□□ -0.83
NUP50-204ENST00000417702 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
NUP50-204ENST00000417702 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
NUP50-204ENST00000417702 GVQW2A0A096LPI5 108 aaPredicted RBP9.82□□□□□ -0.84
NUP50-204ENST00000417702 MT-ND6P03923 174 aa9.82□□□□□ -0.84
NUP50-204ENST00000417702 RAB5AP20339 215 aa9.82□□□□□ -0.84
NUP50-204ENST00000417702 CD164L2Q6UWJ8 174 aa9.82□□□□□ -0.84
NUP50-204ENST00000417702 UBE2D4Q9Y2X8 147 aa9.82□□□□□ -0.84
NUP50-204ENST00000417702 VPS13BQ7Z7G8 4022 aa9.81□□□□□ -0.84
NUP50-204ENST00000417702 IGHV1-58A0A0C4DH39 117 aa9.81□□□□□ -0.84
NUP50-204ENST00000417702 LOC389332A0A1B0GUA5 103 aa9.81□□□□□ -0.84
NUP50-204ENST00000417702 C1orf196B1AJZ1 125 aa9.81□□□□□ -0.84
NUP50-204ENST00000417702 TIMM21Q9BVV7 248 aa9.81□□□□□ -0.84
NUP50-204ENST00000417702 PANO1I0J062 215 aa9.8□□□□□ -0.84
NUP50-204ENST00000417702 KIAA1644Q3SXP7 199 aa9.8□□□□□ -0.84
NUP50-204ENST00000417702 TGIF2-C20orf24A0A0A6YYL0 155 aa9.79□□□□□ -0.84
NUP50-204ENST00000417702 RPL37AP61513 92 aaKnown RBP9.79□□□□□ -0.84
NUP50-204ENST00000417702 FABP9Q0Z7S8 132 aa9.79□□□□□ -0.84
NUP50-204ENST00000417702 CIRBPQ14011 172 aaKnown RBP9.79□□□□□ -0.84
NUP50-204ENST00000417702 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
NUP50-204ENST00000417702 Q8N8P6 123 aa9.79□□□□□ -0.84
NUP50-204ENST00000417702 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
NUP50-204ENST00000417702 TRAV13-1A0A0B4J241 112 aa9.78□□□□□ -0.84
NUP50-204ENST00000417702 MALP21145 153 aa9.78□□□□□ -0.84
NUP50-204ENST00000417702 COX6A2Q02221 97 aa9.78□□□□□ -0.84
NUP50-204ENST00000417702 NXT2Q9NPJ8 142 aaKnown RBP9.78□□□□□ -0.84
NUP50-204ENST00000417702 J3QL48 77 aa9.77□□□□□ -0.85
NUP50-204ENST00000417702 ZNF561-AS1K7EIQ3 104 aa9.77□□□□□ -0.85
NUP50-204ENST00000417702 COX7A2LO14548 114 aa9.77□□□□□ -0.85
NUP50-204ENST00000417702 CHTF8P0CG12 524 aa9.77□□□□□ -0.85
NUP50-204ENST00000417702 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
NUP50-204ENST00000417702 Q6ZUT4 128 aa9.77□□□□□ -0.85
NUP50-204ENST00000417702 SPACA4Q8TDM5 124 aa9.77□□□□□ -0.85
NUP50-204ENST00000417702 SPANXA1Q9NS26 97 aa9.77□□□□□ -0.85
NUP50-204ENST00000417702 PKIGQ9Y2B9 76 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms