RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 PMCHP20382 165 aa6.16□□□□□ -1.42
MDC1-202ENST00000416571 MALP21145 153 aa6.16□□□□□ -1.42
MDC1-202ENST00000416571 FAM210AQ96ND0 272 aa6.16□□□□□ -1.42
MDC1-202ENST00000416571 CNFNQ9BYD5 112 aa6.16□□□□□ -1.42
MDC1-202ENST00000416571 MED9Q9NWA0 146 aa6.16□□□□□ -1.42
MDC1-202ENST00000416571 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 BCL2L11O43521 198 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 PDE6DO43924 150 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 C1orf137Q5JT78 98 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 CD164L2Q6UWJ8 174 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 NUDT10Q8NFP7 164 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 MRAP2Q96G30 205 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 NUDT11Q96G61 164 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 CAMK2N2Q96S95 79 aa6.15□□□□□ -1.42
MDC1-202ENST00000416571 IGLV4-69A0A075B6H9 119 aa6.14□□□□□ -1.43
MDC1-202ENST00000416571 BCL2P10415 239 aa6.14□□□□□ -1.43
MDC1-202ENST00000416571 MEF2BQ02080 365 aaPredicted RBP6.14□□□□□ -1.43
MDC1-202ENST00000416571 RPL18AQ02543 176 aaKnown RBP6.14□□□□□ -1.43
MDC1-202ENST00000416571 RPP21Q9H633 154 aaKnown RBP6.14□□□□□ -1.43
MDC1-202ENST00000416571 LPAP08519 4548 aa6.13□□□□□ -1.43
MDC1-202ENST00000416571 TRBV20OR9-2A0A075B6H5 130 aa6.13□□□□□ -1.43
MDC1-202ENST00000416571 TMEM238LA0A1B0GVL6 79 aa6.13□□□□□ -1.43
MDC1-202ENST00000416571 A0A1W2PNN7 141 aa6.13□□□□□ -1.43
MDC1-202ENST00000416571 APOMO95445 188 aa6.13□□□□□ -1.43
MDC1-202ENST00000416571 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
MDC1-202ENST00000416571 PRR26Q8N8Z3 221 aa6.13□□□□□ -1.43
MDC1-202ENST00000416571 DIRC1Q969H9 104 aa6.13□□□□□ -1.43
MDC1-202ENST00000416571 TMEM242Q9NWH2 141 aa6.13□□□□□ -1.43
MDC1-202ENST00000416571 TRAV1-1A0A0B4J248 108 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 A0A0U1RQV1 116 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 HMSDA8MTL9 139 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 C1orf196B1AJZ1 125 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 COX7A2LO14548 114 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 ESDP10768 282 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 FOXA3P55318 350 aaPredicted RBP6.12□□□□□ -1.43
MDC1-202ENST00000416571 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
MDC1-202ENST00000416571 NUP35Q8NFH5 326 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 RNASE7Q9H1E1 156 aaKnown RBP6.12□□□□□ -1.43
MDC1-202ENST00000416571 ST20Q9HBF5 79 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 CDC42SE2Q9NRR3 84 aa6.12□□□□□ -1.43
MDC1-202ENST00000416571 TRBV6-5A0A0K0K1A5 114 aa6.11□□□□□ -1.43
MDC1-202ENST00000416571 C7orf77A4D0Y5 90 aa6.11□□□□□ -1.43
MDC1-202ENST00000416571 TSHBP01222 138 aa6.11□□□□□ -1.43
MDC1-202ENST00000416571 SMAGPQ0VAQ4 97 aa6.11□□□□□ -1.43
MDC1-202ENST00000416571 MRPL52Q86TS9 123 aaKnown RBP6.11□□□□□ -1.43
MDC1-202ENST00000416571 TSKUQ8WUA8 353 aa6.11□□□□□ -1.43
MDC1-202ENST00000416571 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
MDC1-202ENST00000416571 A0A087WZ39 114 aa6.1□□□□□ -1.43
MDC1-202ENST00000416571 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.1□□□□□ -1.43
MDC1-202ENST00000416571 IGLV7-43P04211 117 aa6.1□□□□□ -1.43
MDC1-202ENST00000416571 PRR4Q16378 134 aa6.1□□□□□ -1.43
MDC1-202ENST00000416571 RGS21Q2M5E4 152 aa6.1□□□□□ -1.43
MDC1-202ENST00000416571 ANAPC16Q96DE5 110 aa6.1□□□□□ -1.43
MDC1-202ENST00000416571 C2orf48Q96LS8 159 aa6.1□□□□□ -1.43
MDC1-202ENST00000416571 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
MDC1-202ENST00000416571 GATCO43716 136 aaKnown RBP6.09□□□□□ -1.43
MDC1-202ENST00000416571 FCER1GP30273 86 aa6.09□□□□□ -1.43
MDC1-202ENST00000416571 UBE2D1P51668 147 aa6.09□□□□□ -1.43
MDC1-202ENST00000416571 SPAG11BQ08648 103 aa6.09□□□□□ -1.43
MDC1-202ENST00000416571 OPRPNQ99935 248 aaPredicted RBP6.09□□□□□ -1.43
MDC1-202ENST00000416571 TRAV13-1A0A0B4J241 112 aa6.08□□□□□ -1.44
MDC1-202ENST00000416571 H0Y9J4 135 aa6.08□□□□□ -1.44
MDC1-202ENST00000416571 K7EN84 100 aa6.08□□□□□ -1.44
MDC1-202ENST00000416571 TAGLN2P37802 199 aaKnown RBP6.08□□□□□ -1.44
MDC1-202ENST00000416571 C5orf38Q86SI9 138 aa6.08□□□□□ -1.44
MDC1-202ENST00000416571 OCC1Q8TAD7 63 aa6.08□□□□□ -1.44
MDC1-202ENST00000416571 BATF3Q9NR55 127 aa6.08□□□□□ -1.44
MDC1-202ENST00000416571 TRBV27A0A0K0K1C4 114 aa6.07□□□□□ -1.44
MDC1-202ENST00000416571 A8MWL6 223 aa6.07□□□□□ -1.44
MDC1-202ENST00000416571 POLR2KP53803 58 aaKnown RBP6.07□□□□□ -1.44
MDC1-202ENST00000416571 RNF151Q2KHN1 245 aa6.07□□□□□ -1.44
MDC1-202ENST00000416571 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
MDC1-202ENST00000416571 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
MDC1-202ENST00000416571 IMMP2LQ96T52 175 aa6.07□□□□□ -1.44
MDC1-202ENST00000416571 VCYO14598 125 aa6.06□□□□□ -1.44
MDC1-202ENST00000416571 RPL13AP40429 203 aaKnown RBP6.06□□□□□ -1.44
MDC1-202ENST00000416571 OR10D4PQ8NGN7 298 aa6.06□□□□□ -1.44
MDC1-202ENST00000416571 KIR2DL4Q99706 377 aa6.06□□□□□ -1.44
MDC1-202ENST00000416571 TMEM191AQ9H0A3 160 aa6.06□□□□□ -1.44
MDC1-202ENST00000416571 UBE2D4Q9Y2X8 147 aa6.06□□□□□ -1.44
MDC1-202ENST00000416571 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
MDC1-202ENST00000416571 A0A1B0GUT8 65 aa6.05□□□□□ -1.44
MDC1-202ENST00000416571 NDUFA1O15239 70 aa6.05□□□□□ -1.44
MDC1-202ENST00000416571 UBE2BP63146 152 aa6.05□□□□□ -1.44
MDC1-202ENST00000416571 FAM231DQ6ZW35 169 aa6.05□□□□□ -1.44
MDC1-202ENST00000416571 FAM19A5Q7Z5A7 132 aaPredicted RBP6.05□□□□□ -1.44
MDC1-202ENST00000416571 ORAOV1Q8WV07 137 aa6.05□□□□□ -1.44
MDC1-202ENST00000416571 TMEM18Q96B42 140 aa6.05□□□□□ -1.44
MDC1-202ENST00000416571 MRPL35Q9NZE8 188 aaKnown RBP6.05□□□□□ -1.44
MDC1-202ENST00000416571 FAM168BA1KXE4 195 aa6.04□□□□□ -1.44
MDC1-202ENST00000416571 F8WDY8 70 aa6.04□□□□□ -1.44
MDC1-202ENST00000416571 PPP1R17O96001 155 aa6.04□□□□□ -1.44
MDC1-202ENST00000416571 GHRHP01286 108 aa6.04□□□□□ -1.44
MDC1-202ENST00000416571 RAB4AP20338 218 aa6.04□□□□□ -1.44
MDC1-202ENST00000416571 CT83Q5H943 113 aa6.04□□□□□ -1.44
MDC1-202ENST00000416571 Q6ZUT4 128 aa6.04□□□□□ -1.44
MDC1-202ENST00000416571 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
MDC1-202ENST00000416571 HIGD1CA8MV81 97 aa6.03□□□□□ -1.44
MDC1-202ENST00000416571 SUMO2P61956 95 aaKnown RBP6.03□□□□□ -1.44
MDC1-202ENST00000416571 TMEM241Q24JQ0 296 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms