RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SS18L2Q9UHA2 77 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 A0A087WWL8 130 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 TRGV1A0A0A0MS02 117 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 LINC01549A6NIU2 74 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 UBE2D1P51668 147 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 UBE2D3P61077 147 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 UBE2D2P62837 147 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 SPXQ9BT56 116 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 DAZ2Q13117 558 aaKnown RBP11.07□□□□□ -0.64
SHMT2-202ENST00000414700 PRSS29PA6NIE9 313 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 NRACQ8N912 160 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 RASL10AQ92737 203 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 TP53TG1Q9Y2A0 90 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 STAB2Q8WWQ8 2551 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 LOC107984156A0A0G2JMH3 177 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 MIFP14174 115 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 ARL17AQ8IVW1 177 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 KIF25-AS1Q9Y6Z4 181 aa11.06□□□□□ -0.64
SHMT2-202ENST00000414700 TMEM262E9PQX1 116 aa11.05□□□□□ -0.64
SHMT2-202ENST00000414700 POM121L12Q8N7R1 296 aa11.05□□□□□ -0.64
SHMT2-202ENST00000414700 PTH2Q96A98 100 aa11.05□□□□□ -0.64
SHMT2-202ENST00000414700 TM2D3Q9BRN9 247 aa11.05□□□□□ -0.64
SHMT2-202ENST00000414700 GAGE7O76087 117 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 CRYGDP07320 174 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 GAGE12FP0CL80 117 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 GAGE12GP0CL81 117 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 GAGE12IP0CL82 117 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 CELA1Q9UNI1 258 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 TRBV20-1A0A075B6N2 111 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 A8MWV9 139 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 LINC00315P59091 139 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 FAM222AQ5U5X8 452 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 ZFP2Q6ZN57 461 aa11.04□□□□□ -0.64
SHMT2-202ENST00000414700 TRAV26-2A0A0B4J265 109 aa11.03□□□□□ -0.64
SHMT2-202ENST00000414700 DEFB130BP0DP73 79 aa11.02□□□□□ -0.64
SHMT2-202ENST00000414700 DEFB130AP0DP74 79 aa11.02□□□□□ -0.64
SHMT2-202ENST00000414700 PRADC1Q9BSG0 188 aa11.02□□□□□ -0.64
SHMT2-202ENST00000414700 DPH3P1Q9H4G8 78 aa11.02□□□□□ -0.64
SHMT2-202ENST00000414700 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
SHMT2-202ENST00000414700 MGPP08493 103 aa11.02□□□□□ -0.65
SHMT2-202ENST00000414700 FBN3Q75N90 2809 aa11.02□□□□□ -0.65
SHMT2-202ENST00000414700 IGHV3-53P01767 116 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 NEXN-AS1Q8NBZ9 246 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 TCL1BO95988 128 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHMT2-202ENST00000414700 ORMDL2Q53FV1 153 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 SCGB1D4Q6XE38 83 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 ANKRD29Q8N6D5 301 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 TOMM6Q96B49 74 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 SMIM2Q9BVW6 85 aa11.01□□□□□ -0.65
SHMT2-202ENST00000414700 B5MCH6 92 aa11□□□□□ -0.65
SHMT2-202ENST00000414700 SFTA2Q6UW10 78 aa11□□□□□ -0.65
SHMT2-202ENST00000414700 Q6ZSN1 163 aa11□□□□□ -0.65
SHMT2-202ENST00000414700 B9D2Q9BPU9 175 aa11□□□□□ -0.65
SHMT2-202ENST00000414700 A0A0J9YWU9 116 aa10.99□□□□□ -0.65
SHMT2-202ENST00000414700 M0QXV9 152 aa10.99□□□□□ -0.65
SHMT2-202ENST00000414700 RHODO00212 210 aa10.99□□□□□ -0.65
SHMT2-202ENST00000414700 RS1O15537 224 aa10.99□□□□□ -0.65
SHMT2-202ENST00000414700 NHLRC4P0CG21 123 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-202ENST00000414700 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
SHMT2-202ENST00000414700 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
SHMT2-202ENST00000414700 ZNF56Q15929 161 aa10.99□□□□□ -0.65
SHMT2-202ENST00000414700 LYRM9A8MSI8 78 aa10.98□□□□□ -0.65
SHMT2-202ENST00000414700 F5H697 171 aa10.98□□□□□ -0.65
SHMT2-202ENST00000414700 KIR2DL4Q99706 377 aa10.98□□□□□ -0.65
SHMT2-202ENST00000414700 Q9UF83 564 aa10.98□□□□□ -0.65
SHMT2-202ENST00000414700 SUMO4Q6EEV6 95 aa10.97□□□□□ -0.65
SHMT2-202ENST00000414700 TRAV4A0A0B4J268 109 aa10.97□□□□□ -0.65
SHMT2-202ENST00000414700 BAALCQ8WXS3 180 aa10.97□□□□□ -0.65
SHMT2-202ENST00000414700 SPART-AS1P0CW21 52 aa10.96□□□□□ -0.65
SHMT2-202ENST00000414700 P0DMU3 169 aa10.96□□□□□ -0.65
SHMT2-202ENST00000414700 FAM231AP0DMU4 169 aa10.96□□□□□ -0.65
SHMT2-202ENST00000414700 FAM231CP0DMU5 169 aa10.96□□□□□ -0.65
SHMT2-202ENST00000414700 NDUFV3P56181 108 aaKnown RBP10.96□□□□□ -0.65
SHMT2-202ENST00000414700 C11orf68Q9H3H3 251 aaKnown RBP10.96□□□□□ -0.65
SHMT2-202ENST00000414700 GAGE2BQ13066 116 aa10.96□□□□□ -0.66
SHMT2-202ENST00000414700 GAGE2EQ4V326 116 aa10.96□□□□□ -0.66
SHMT2-202ENST00000414700 RPL39LQ96EH5 51 aaKnown RBP10.96□□□□□ -0.66
SHMT2-202ENST00000414700 GAGE2DQ9UEU5 116 aa10.96□□□□□ -0.66
SHMT2-202ENST00000414700 GAGE12JA6NER3 117 aa10.95□□□□□ -0.66
SHMT2-202ENST00000414700 SNCGO76070 127 aa10.95□□□□□ -0.66
SHMT2-202ENST00000414700 DAD1P61803 113 aa10.95□□□□□ -0.66
SHMT2-202ENST00000414700 GAGE4Q13068 117 aa10.95□□□□□ -0.66
SHMT2-202ENST00000414700 C10orf126Q8N4M7 172 aa10.95□□□□□ -0.66
SHMT2-202ENST00000414700 TGP01266 2768 aa10.95□□□□□ -0.66
SHMT2-202ENST00000414700 A0A0J9YY99 117 aa10.94□□□□□ -0.66
SHMT2-202ENST00000414700 M0QY20 66 aa10.94□□□□□ -0.66
SHMT2-202ENST00000414700 SCGB1C2P0DMR2 95 aa10.94□□□□□ -0.66
SHMT2-202ENST00000414700 Q6Q795 121 aa10.94□□□□□ -0.66
SHMT2-202ENST00000414700 SLC25A20O43772 301 aa10.94□□□□□ -0.66
SHMT2-202ENST00000414700 HERVK_113P61574 105 aa10.94□□□□□ -0.66
SHMT2-202ENST00000414700 CFC1BP0CG36 223 aa10.93□□□□□ -0.66
SHMT2-202ENST00000414700 CFC1P0CG37 223 aa10.93□□□□□ -0.66
SHMT2-202ENST00000414700 SUMO2P61956 95 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms