RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 IGKV3OR2-268A0A0C4DH90 116 aa16.62■□□□□ 0.25
CPNE1-207ENST00000414664 USP17L23D6RBM5 183 aa16.62■□□□□ 0.25
CPNE1-207ENST00000414664 KRTAP10-1P60331 282 aa16.62■□□□□ 0.25
CPNE1-207ENST00000414664 RHEBQ15382 184 aa16.62■□□□□ 0.25
CPNE1-207ENST00000414664 DGAT2L7PQ6IED9 249 aa16.62■□□□□ 0.25
CPNE1-207ENST00000414664 CLRN3Q8NCR9 226 aa16.61■□□□□ 0.25
CPNE1-207ENST00000414664 RYR1P21817 5038 aa16.61■□□□□ 0.25
CPNE1-207ENST00000414664 RPS10P5Q9NQ39 176 aa16.59■□□□□ 0.25
CPNE1-207ENST00000414664 CDC42SE2Q9NRR3 84 aa16.59■□□□□ 0.25
CPNE1-207ENST00000414664 CSDC2Q9Y534 153 aaKnown RBP16.59■□□□□ 0.25
CPNE1-207ENST00000414664 RAB5AP20339 215 aa16.58■□□□□ 0.24
CPNE1-207ENST00000414664 NDUFA5Q16718 116 aa16.58■□□□□ 0.24
CPNE1-207ENST00000414664 PRSS47A8MTI9 375 aa16.57■□□□□ 0.24
CPNE1-207ENST00000414664 ZNF664Q8N3J9 261 aa16.57■□□□□ 0.24
CPNE1-207ENST00000414664 MAP1LC3AQ9H492 121 aa16.57■□□□□ 0.24
CPNE1-207ENST00000414664 CHCHD10Q8WYQ3 142 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-207ENST00000414664 TIMM21Q9BVV7 248 aa16.56■□□□□ 0.24
CPNE1-207ENST00000414664 UBE2D4Q9Y2X8 147 aa16.56■□□□□ 0.24
CPNE1-207ENST00000414664 GAGE12HA6NDE8 117 aa16.55■□□□□ 0.24
CPNE1-207ENST00000414664 APOC3P02656 99 aa16.54■□□□□ 0.24
CPNE1-207ENST00000414664 COX19Q49B96 90 aa16.54■□□□□ 0.24
CPNE1-207ENST00000414664 LOC389332A0A1B0GUA5 103 aa16.53■□□□□ 0.24
CPNE1-207ENST00000414664 LINC00959A0A1B0GUT2 108 aa16.53■□□□□ 0.24
CPNE1-207ENST00000414664 SS18Q15532 418 aa16.53■□□□□ 0.24
CPNE1-207ENST00000414664 CFAP161Q6P656 301 aa16.53■□□□□ 0.24
CPNE1-207ENST00000414664 SNAPINO95295 136 aa16.52■□□□□ 0.24
CPNE1-207ENST00000414664 PRSS1P07477 247 aa16.52■□□□□ 0.24
CPNE1-207ENST00000414664 SVBPQ8N300 66 aa16.52■□□□□ 0.24
CPNE1-207ENST00000414664 GNB1LQ9BYB4 327 aa16.52■□□□□ 0.24
CPNE1-207ENST00000414664 APOBP04114 4563 aaKnown RBP16.51■□□□□ 0.23
CPNE1-207ENST00000414664 XGP55808 180 aa16.5■□□□□ 0.23
CPNE1-207ENST00000414664 Q8N8P6 123 aa16.5■□□□□ 0.23
CPNE1-207ENST00000414664 SPANXA1Q9NS26 97 aa16.5■□□□□ 0.23
CPNE1-207ENST00000414664 CCL25O15444 150 aa16.49■□□□□ 0.23
CPNE1-207ENST00000414664 RPL39P62891 51 aaKnown RBP16.49■□□□□ 0.23
CPNE1-207ENST00000414664 hDV102S1A0JD36 115 aa16.48■□□□□ 0.23
CPNE1-207ENST00000414664 XCL1P47992 114 aa16.48■□□□□ 0.23
CPNE1-207ENST00000414664 AP5S1Q9NUS5 200 aa16.48■□□□□ 0.23
CPNE1-207ENST00000414664 C1orf196B1AJZ1 125 aa16.47■□□□□ 0.23
CPNE1-207ENST00000414664 K7EMI3 77 aa16.47■□□□□ 0.23
CPNE1-207ENST00000414664 MT-ND6P03923 174 aa16.47■□□□□ 0.23
CPNE1-207ENST00000414664 FOXI1Q12951 378 aa16.47■□□□□ 0.23
CPNE1-207ENST00000414664 KIAA1644Q3SXP7 199 aa16.47■□□□□ 0.23
CPNE1-207ENST00000414664 NXT2Q9NPJ8 142 aaKnown RBP16.47■□□□□ 0.23
CPNE1-207ENST00000414664 Q6ZUT4 128 aa16.46■□□□□ 0.23
CPNE1-207ENST00000414664 HSPG2P98160 4391 aa16.46■□□□□ 0.23
CPNE1-207ENST00000414664 LINC01620Q4KN68 170 aa16.45■□□□□ 0.22
CPNE1-207ENST00000414664 ORMDL2Q53FV1 153 aa16.45■□□□□ 0.22
CPNE1-207ENST00000414664 CD164L2Q6UWJ8 174 aa16.45■□□□□ 0.22
CPNE1-207ENST00000414664 IFI27P40305 119 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-207ENST00000414664 MRPS36P82909 103 aaKnown RBP16.44■□□□□ 0.22
CPNE1-207ENST00000414664 RNASE13Q5GAN3 156 aaKnown RBP16.44■□□□□ 0.22
CPNE1-207ENST00000414664 Q8N1X5 172 aa16.44■□□□□ 0.22
CPNE1-207ENST00000414664 FAM30AQ9NZY2 134 aa16.43■□□□□ 0.22
CPNE1-207ENST00000414664 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-207ENST00000414664 TRAV13-1A0A0B4J241 112 aa16.42■□□□□ 0.22
CPNE1-207ENST00000414664 CNBPP62633 177 aaKnown RBP16.42■□□□□ 0.22
CPNE1-207ENST00000414664 Q6ZSA8 131 aa16.42■□□□□ 0.22
CPNE1-207ENST00000414664 C15orf56Q8N910 161 aa16.42■□□□□ 0.22
CPNE1-207ENST00000414664 C9orf163Q8N9P6 203 aa16.42■□□□□ 0.22
CPNE1-207ENST00000414664 PYGO1Q9Y3Y4 419 aa16.42■□□□□ 0.22
CPNE1-207ENST00000414664 G0S2P27469 103 aa16.41■□□□□ 0.22
CPNE1-207ENST00000414664 FABP9Q0Z7S8 132 aa16.41■□□□□ 0.22
CPNE1-207ENST00000414664 MRPL18Q9H0U6 180 aaKnown RBP16.41■□□□□ 0.22
CPNE1-207ENST00000414664 CYSLTR1Q9Y271 337 aa16.41■□□□□ 0.22
CPNE1-207ENST00000414664 TGIF2-C20orf24A0A0A6YYL0 155 aa16.39■□□□□ 0.21
CPNE1-207ENST00000414664 IGHV1-58A0A0C4DH39 117 aa16.39■□□□□ 0.21
CPNE1-207ENST00000414664 C2orf66Q6UXQ4 117 aa16.39■□□□□ 0.21
CPNE1-207ENST00000414664 PRSS3P2Q8NHM4 247 aa16.39■□□□□ 0.21
CPNE1-207ENST00000414664 ALKBH7Q9BT30 221 aaPredicted RBP16.39■□□□□ 0.21
CPNE1-207ENST00000414664 GVQW2A0A096LPI5 108 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-207ENST00000414664 HIGD2BQ4VC39 106 aa16.38■□□□□ 0.21
CPNE1-207ENST00000414664 FAM104AQ969W3 186 aa16.38■□□□□ 0.21
CPNE1-207ENST00000414664 OPRPNQ99935 248 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-207ENST00000414664 IFITM10A6NMD0 228 aa16.36■□□□□ 0.21
CPNE1-207ENST00000414664 COX7A2LO14548 114 aa16.36■□□□□ 0.21
CPNE1-207ENST00000414664 MALP21145 153 aa16.36■□□□□ 0.21
CPNE1-207ENST00000414664 TMEM141Q96I45 108 aa16.36■□□□□ 0.21
CPNE1-207ENST00000414664 HAMPP81172 84 aa16.35■□□□□ 0.21
CPNE1-207ENST00000414664 TRAPPC1Q9Y5R8 145 aa16.35■□□□□ 0.21
CPNE1-207ENST00000414664 IGLV4-3A0A075B6K6 122 aa16.34■□□□□ 0.21
CPNE1-207ENST00000414664 KRTAP17-1Q9BYP8 105 aa16.34■□□□□ 0.21
CPNE1-207ENST00000414664 DNAH8Q96JB1 4490 aa16.34■□□□□ 0.21
CPNE1-207ENST00000414664 IGHV3-64A0A075B6Q5 118 aa16.33■□□□□ 0.2
CPNE1-207ENST00000414664 SLPIP03973 132 aa16.33■□□□□ 0.2
CPNE1-207ENST00000414664 NPSP0C0P6 89 aa16.33■□□□□ 0.2
CPNE1-207ENST00000414664 Q6ZN92 141 aa16.33■□□□□ 0.2
CPNE1-207ENST00000414664 EPM2AB3EWF7 344 aa16.32■□□□□ 0.2
CPNE1-207ENST00000414664 TEX43Q6ZNM6 134 aa16.32■□□□□ 0.2
CPNE1-207ENST00000414664 CHAC1Q9BUX1 264 aa16.32■□□□□ 0.2
CPNE1-207ENST00000414664 ZNF561-AS1K7EIQ3 104 aa16.31■□□□□ 0.2
CPNE1-207ENST00000414664 SMR3BP02814 79 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-207ENST00000414664 SDIM1Q6ZPB5 146 aa16.31■□□□□ 0.2
CPNE1-207ENST00000414664 SLC7A5P1Q8MH63 180 aa16.31■□□□□ 0.2
CPNE1-207ENST00000414664 APOMO95445 188 aa16.3■□□□□ 0.2
CPNE1-207ENST00000414664 PAPPA-AS1Q5QFB9 102 aa16.3■□□□□ 0.2
CPNE1-207ENST00000414664 C5orf38Q86SI9 138 aa16.3■□□□□ 0.2
CPNE1-207ENST00000414664 C2orf88Q9BSF0 95 aa16.3■□□□□ 0.2
CPNE1-207ENST00000414664 KRTAP4-5Q9BYR2 181 aa16.3■□□□□ 0.2
CPNE1-207ENST00000414664 LINC01546A6NGU7 62 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms