RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 NFE4Q86UQ8 179 aa5.72□□□□□ -1.49
HDAC9-207ENST00000413509 C11orf45Q8TAV5 145 aa5.72□□□□□ -1.49
HDAC9-207ENST00000413509 OPRPNQ99935 248 aaPredicted RBP5.72□□□□□ -1.49
HDAC9-207ENST00000413509 PAM16Q9Y3D7 125 aa5.72□□□□□ -1.49
HDAC9-207ENST00000413509 CHTOPQ9Y3Y2 248 aaKnown RBP5.72□□□□□ -1.49
HDAC9-207ENST00000413509 A0A096LPF7 62 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 A0A0J9YY99 117 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 hDV102S1A0JD36 115 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 IGLC3P0DOY3 106 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 ZNF25P17030 456 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-207ENST00000413509 SMAGPQ0VAQ4 97 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 MRPL23Q16540 153 aaKnown RBP5.71□□□□□ -1.5
HDAC9-207ENST00000413509 ZC2HC1BQ5TFG8 222 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 CEMP1Q6PRD7 247 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-207ENST00000413509 Q6ZUT4 128 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 FAM19A3Q7Z5A8 133 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 MRAPQ8TCY5 172 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 ICOSQ9Y6W8 199 aa5.71□□□□□ -1.5
HDAC9-207ENST00000413509 TSTD3H0UI37 97 aa5.7□□□□□ -1.5
HDAC9-207ENST00000413509 NANOS2P60321 138 aaKnown RBP5.7□□□□□ -1.5
HDAC9-207ENST00000413509 ANKRD39Q53RE8 183 aa5.7□□□□□ -1.5
HDAC9-207ENST00000413509 VCX2Q9H322 139 aa5.7□□□□□ -1.5
HDAC9-207ENST00000413509 PRO1933Q9H354 126 aa5.7□□□□□ -1.5
HDAC9-207ENST00000413509 CDC42SE2Q9NRR3 84 aa5.7□□□□□ -1.5
HDAC9-207ENST00000413509 A0A1B0GUV1 79 aa5.69□□□□□ -1.5
HDAC9-207ENST00000413509 C11orf86A6NJI1 115 aa5.69□□□□□ -1.5
HDAC9-207ENST00000413509 HSBP1L1C9JCN9 74 aa5.69□□□□□ -1.5
HDAC9-207ENST00000413509 HTN3P15516 51 aa5.69□□□□□ -1.5
HDAC9-207ENST00000413509 UBE2D1P51668 147 aa5.69□□□□□ -1.5
HDAC9-207ENST00000413509 MIEN1Q9BRT3 115 aa5.69□□□□□ -1.5
HDAC9-207ENST00000413509 IGLV5-45A0A087WSX0 123 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 DEFB131BA0A096LNP1 70 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 TRAV10A0A0B4J240 114 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 TINCRA0A1B0GVN0 87 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 UBE2L6O14933 153 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 NHLRC4P0CG21 123 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-207ENST00000413509 DDTP30046 118 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 LELP1Q5T871 98 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 STPG4Q8N801 248 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 OR5A1Q8NGJ0 315 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 CSMD3Q7Z407 3707 aa5.68□□□□□ -1.5
HDAC9-207ENST00000413509 A0A0J9YXV3 536 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 DLEU1O43261 78 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 COX8AP10176 69 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 ZNF22P17026 224 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-207ENST00000413509 GAGE6Q13070 117 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 RNASE13Q5GAN3 156 aaKnown RBP5.67□□□□□ -1.5
HDAC9-207ENST00000413509 TMEM101Q96IK0 257 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 C2orf88Q9BSF0 95 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 CHCHD5Q9BSY4 110 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 CHAC1Q9BUX1 264 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 UQCR10Q9UDW1 63 aa5.67□□□□□ -1.5
HDAC9-207ENST00000413509 DNAH1Q9P2D7 4330 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 IGLV4-60A0A075B6I1 120 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 IGKV2D-26A0A0A0MRZ7 120 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 LINC00587B1AMM8 73 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 E9PLD3 99 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 RBX1P62877 108 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 AMMECR1LQ6DCA0 310 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 DGAT2L7PQ6IED9 249 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 LYPD5Q6UWN5 251 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 C14orf144Q96I85 54 aa5.66□□□□□ -1.5
HDAC9-207ENST00000413509 TMEM223A0PJW6 202 aa5.65□□□□□ -1.5
HDAC9-207ENST00000413509 PCP4L1A6NKN8 68 aa5.65□□□□□ -1.5
HDAC9-207ENST00000413509 MPV17L2Q567V2 206 aa5.65□□□□□ -1.5
HDAC9-207ENST00000413509 LINC00242Q5T6M2 205 aa5.65□□□□□ -1.5
HDAC9-207ENST00000413509 SLC25A34Q6PIV7 304 aa5.65□□□□□ -1.5
HDAC9-207ENST00000413509 C15orf53Q8NAA6 179 aa5.65□□□□□ -1.5
HDAC9-207ENST00000413509 TENM2Q9NT68 2774 aa5.65□□□□□ -1.51
HDAC9-207ENST00000413509 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
HDAC9-207ENST00000413509 SEC11AP67812 179 aa5.64□□□□□ -1.51
HDAC9-207ENST00000413509 C2orf91Q6ZV80 131 aa5.64□□□□□ -1.51
HDAC9-207ENST00000413509 PCP2Q8IVA1 136 aa5.64□□□□□ -1.51
HDAC9-207ENST00000413509 MRPS16Q9Y3D3 137 aaKnown RBP5.64□□□□□ -1.51
HDAC9-207ENST00000413509 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
HDAC9-207ENST00000413509 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
HDAC9-207ENST00000413509 CCL25O15444 150 aa5.63□□□□□ -1.51
HDAC9-207ENST00000413509 HERVK_113P61574 105 aa5.63□□□□□ -1.51
HDAC9-207ENST00000413509 HERVK_113P63121 156 aa5.63□□□□□ -1.51
HDAC9-207ENST00000413509 DEFA6Q01524 100 aa5.63□□□□□ -1.51
HDAC9-207ENST00000413509 COX6A2Q02221 97 aa5.63□□□□□ -1.51
HDAC9-207ENST00000413509 ESRGQ1W209 222 aa5.63□□□□□ -1.51
HDAC9-207ENST00000413509 TP73-AS1Q9UF72 201 aa5.63□□□□□ -1.51
HDAC9-207ENST00000413509 LINC00959A0A1B0GUT2 108 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 LEPROTO15243 131 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 SIVA1O15304 175 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 NMUP48645 174 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 TMEM170BQ5T4T1 132 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 Q8N3U1 123 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 HIGD1BQ9P298 99 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 CDKN2A-AS1Q9UH64 79 aa5.62□□□□□ -1.51
HDAC9-207ENST00000413509 TGP01266 2768 aa5.61□□□□□ -1.51
HDAC9-207ENST00000413509 TRAV13-1A0A0B4J241 112 aa5.61□□□□□ -1.51
HDAC9-207ENST00000413509 TRAV8-6A0A0B4J262 113 aa5.61□□□□□ -1.51
HDAC9-207ENST00000413509 IGHV3OR16-9A0A0B4J2B5 98 aa5.61□□□□□ -1.51
HDAC9-207ENST00000413509 TMEM262E9PQX1 116 aa5.61□□□□□ -1.51
HDAC9-207ENST00000413509 HNRNPA3P51991 378 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms