RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CRIP1P50238 77 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 SUMO4Q6EEV6 95 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 NACAE9PAV3 2078 aa6.4□□□□□ -1.38
PBRM1-209ENST00000412587 GPHB5Q86YW7 130 aa6.4□□□□□ -1.38
PBRM1-209ENST00000412587 ODF3BA8MYP8 253 aa6.4□□□□□ -1.38
PBRM1-209ENST00000412587 NOP10Q9NPE3 64 aaKnown RBP6.4□□□□□ -1.38
PBRM1-209ENST00000412587 AGRNO00468 2067 aa6.4□□□□□ -1.39
PBRM1-209ENST00000412587 IGLV2-11P01706 119 aa6.4□□□□□ -1.39
PBRM1-209ENST00000412587 A0A087WVE0 104 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 PDE6GP18545 87 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 RNASE13Q5GAN3 156 aaKnown RBP6.39□□□□□ -1.39
PBRM1-209ENST00000412587 PRRC2AP48634 2157 aaKnown RBP6.39□□□□□ -1.39
PBRM1-209ENST00000412587 EDN2P20800 178 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 FAM222AQ5U5X8 452 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 TNRC6BQ9UPQ9 1833 aaKnown RBP6.39□□□□□ -1.39
PBRM1-209ENST00000412587 A0A0J9YX75 114 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 DNAJC9-AS1A6NH13 148 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 IGHV4-31P0DP07 118 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
PBRM1-209ENST00000412587 USP9YO00507 2555 aaPredicted RBP6.39□□□□□ -1.39
PBRM1-209ENST00000412587 H3BQ85 93 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 ZNF80P51504 273 aaPredicted RBP6.38□□□□□ -1.39
PBRM1-209ENST00000412587 PIK3CD-AS1Q5SR53 167 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 C11orf71Q6IPW1 123 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 A0A096LPF7 62 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 CRYGDP07320 174 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 ABCA12Q86UK0 2595 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 TRBV7-6A0A0J9YX20 115 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 MIFP14174 115 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 UBE2BP63146 152 aa6.38□□□□□ -1.39
PBRM1-209ENST00000412587 ZNF561-AS1K7EIQ3 104 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 EBI3Q14213 229 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 NRACQ8N912 160 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 PLXNB1O43157 2135 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 C20orf203Q8NBC4 194 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 FASNP49327 2511 aaKnown RBP6.37□□□□□ -1.39
PBRM1-209ENST00000412587 C4orf3Q8WVX3 66 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 LINC01548A6NM66 108 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 PRAC2D3DTV9 90 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 UNQ9165/PRO28630Q6UXU0 137 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 FAM19A4Q96LR4 140 aa6.37□□□□□ -1.39
PBRM1-209ENST00000412587 LINC00336Q6ZUF6 198 aa6.36□□□□□ -1.39
PBRM1-209ENST00000412587 EXPH5Q8NEV8 1989 aa6.36□□□□□ -1.39
PBRM1-209ENST00000412587 ANGP03950 147 aaKnown RBP6.36□□□□□ -1.39
PBRM1-209ENST00000412587 LINC00308Q8TCZ7 52 aa6.36□□□□□ -1.39
PBRM1-209ENST00000412587 OPRPNQ99935 248 aaPredicted RBP6.36□□□□□ -1.39
PBRM1-209ENST00000412587 CNFNQ9BYD5 112 aa6.35□□□□□ -1.39
PBRM1-209ENST00000412587 NCR3O14931 201 aa6.35□□□□□ -1.39
PBRM1-209ENST00000412587 Q6YL49 198 aa6.35□□□□□ -1.39
PBRM1-209ENST00000412587 DOPEY1Q5JWR5 2465 aa6.35□□□□□ -1.39
PBRM1-209ENST00000412587 SPART-AS1P0CW21 52 aa6.35□□□□□ -1.39
PBRM1-209ENST00000412587 C16orf74Q96GX8 76 aa6.35□□□□□ -1.39
PBRM1-209ENST00000412587 IGF1P05019 195 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 C9orf47Q6ZRZ4 202 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 C1orf229Q6ZS94 237 aaPredicted RBP6.34□□□□□ -1.39
PBRM1-209ENST00000412587 LRP4O75096 1905 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 RMI2Q96E14 147 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 ZNF462Q96JM2 2506 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 MP68P56378 58 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 DEFB1P60022 68 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 CDSNQ15517 529 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 CCDC140Q96MF4 163 aa6.34□□□□□ -1.39
PBRM1-209ENST00000412587 SETD2Q9BYW2 2564 aaPredicted RBP6.34□□□□□ -1.39
PBRM1-209ENST00000412587 PRB2P02812 416 aaPredicted RBP6.34□□□□□ -1.4
PBRM1-209ENST00000412587 UBE2AP49459 152 aa6.34□□□□□ -1.4
PBRM1-209ENST00000412587 CD164Q04900 197 aa6.34□□□□□ -1.4
PBRM1-209ENST00000412587 GAS8-AS1O95177 125 aa6.33□□□□□ -1.4
PBRM1-209ENST00000412587 NREPQ16612 68 aa6.33□□□□□ -1.4
PBRM1-209ENST00000412587 INAFM1C9JVW0 142 aa6.33□□□□□ -1.4
PBRM1-209ENST00000412587 LRRK2Q5S007 2527 aa6.33□□□□□ -1.4
PBRM1-209ENST00000412587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
PBRM1-209ENST00000412587 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
PBRM1-209ENST00000412587 LY6LH3BQJ8 138 aa6.33□□□□□ -1.4
PBRM1-209ENST00000412587 CLPSL2Q6UWE3 100 aa6.32□□□□□ -1.4
PBRM1-209ENST00000412587 TRBV27A0A0K0K1C4 114 aa6.32□□□□□ -1.4
PBRM1-209ENST00000412587 PLAC8L1A1L4L8 177 aa6.32□□□□□ -1.4
PBRM1-209ENST00000412587 NDUFA1O15239 70 aa6.32□□□□□ -1.4
PBRM1-209ENST00000412587 GYPEP15421 78 aa6.32□□□□□ -1.4
PBRM1-209ENST00000412587 ESRGQ1W209 222 aa6.32□□□□□ -1.4
PBRM1-209ENST00000412587 CEP350Q5VT06 3117 aa6.32□□□□□ -1.4
PBRM1-209ENST00000412587 ARHGAP32A7KAX9 2087 aa6.32□□□□□ -1.4
PBRM1-209ENST00000412587 A8MZ25 164 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 DEFB135Q30KP9 77 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 SMAD5-AS1Q9Y6J3 95 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 NDUFS5O43920 106 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 CCKP06307 115 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 VPREB1P12018 145 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 LINC01546A6NGU7 62 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
PBRM1-209ENST00000412587 ATG2AQ2TAZ0 1938 aa6.3□□□□□ -1.4
PBRM1-209ENST00000412587 FN1P02751 2386 aaKnown RBP6.3□□□□□ -1.4
PBRM1-209ENST00000412587 BCE1O60756 84 aa6.3□□□□□ -1.4
PBRM1-209ENST00000412587 TSPEAR-AS2P59090 65 aa6.3□□□□□ -1.4
PBRM1-209ENST00000412587 Q6ZSV7 163 aa6.3□□□□□ -1.4
PBRM1-209ENST00000412587 POM121L12Q8N7R1 296 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms