RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SVBPQ8N300 66 aa8.65□□□□□ -1.02
HDAC8-210ENST00000412342 NTN5Q8WTR8 489 aaPredicted RBP8.65□□□□□ -1.02
HDAC8-210ENST00000412342 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
HDAC8-210ENST00000412342 SNAPINO95295 136 aa8.64□□□□□ -1.03
HDAC8-210ENST00000412342 HLA-DQA1P01909 254 aa8.64□□□□□ -1.03
HDAC8-210ENST00000412342 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
HDAC8-210ENST00000412342 CDC42SE2Q9NRR3 84 aa8.64□□□□□ -1.03
HDAC8-210ENST00000412342 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
HDAC8-210ENST00000412342 TCAPO15273 167 aa8.63□□□□□ -1.03
HDAC8-210ENST00000412342 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
HDAC8-210ENST00000412342 NDUFA5Q16718 116 aa8.63□□□□□ -1.03
HDAC8-210ENST00000412342 SLC7A5P1Q8MH63 180 aa8.63□□□□□ -1.03
HDAC8-210ENST00000412342 OR5A1Q8NGJ0 315 aa8.63□□□□□ -1.03
HDAC8-210ENST00000412342 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
HDAC8-210ENST00000412342 IGLV5-52A0A0A0MRZ9 124 aa8.62□□□□□ -1.03
HDAC8-210ENST00000412342 RPL39P62891 51 aaKnown RBP8.62□□□□□ -1.03
HDAC8-210ENST00000412342 KIAA1644Q3SXP7 199 aa8.62□□□□□ -1.03
HDAC8-210ENST00000412342 TMEM101Q96IK0 257 aa8.62□□□□□ -1.03
HDAC8-210ENST00000412342 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
HDAC8-210ENST00000412342 TIMM21Q9BVV7 248 aa8.62□□□□□ -1.03
HDAC8-210ENST00000412342 MAP1LC3AQ9H492 121 aa8.62□□□□□ -1.03
HDAC8-210ENST00000412342 TGIF2-C20orf24A0A0A6YYL0 155 aa8.61□□□□□ -1.03
HDAC8-210ENST00000412342 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
HDAC8-210ENST00000412342 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
HDAC8-210ENST00000412342 USP17L23D6RBM5 183 aa8.61□□□□□ -1.03
HDAC8-210ENST00000412342 CDK2AP2O75956 126 aa8.61□□□□□ -1.03
HDAC8-210ENST00000412342 COX19Q49B96 90 aa8.61□□□□□ -1.03
HDAC8-210ENST00000412342 ZNF664Q8N3J9 261 aa8.61□□□□□ -1.03
HDAC8-210ENST00000412342 Q8N8P6 123 aa8.61□□□□□ -1.03
HDAC8-210ENST00000412342 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.6□□□□□ -1.03
HDAC8-210ENST00000412342 LINC00959A0A1B0GUT2 108 aa8.6□□□□□ -1.03
HDAC8-210ENST00000412342 MT-ND6P03923 174 aa8.6□□□□□ -1.03
HDAC8-210ENST00000412342 GCSHP23434 173 aa8.6□□□□□ -1.03
HDAC8-210ENST00000412342 Q6ZUT4 128 aa8.6□□□□□ -1.03
HDAC8-210ENST00000412342 CHCHD10Q8WYQ3 142 aaPredicted RBP8.6□□□□□ -1.03
HDAC8-210ENST00000412342 FAT1Q14517 4588 aa8.59□□□□□ -1.03
HDAC8-210ENST00000412342 GAGE12HA6NDE8 117 aa8.59□□□□□ -1.03
HDAC8-210ENST00000412342 PRSS1P07477 247 aa8.59□□□□□ -1.03
HDAC8-210ENST00000412342 TMEM18Q96B42 140 aa8.59□□□□□ -1.03
HDAC8-210ENST00000412342 ALKBH7Q9BT30 221 aaPredicted RBP8.59□□□□□ -1.03
HDAC8-210ENST00000412342 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
HDAC8-210ENST00000412342 MRPL18Q9H0U6 180 aaKnown RBP8.59□□□□□ -1.03
HDAC8-210ENST00000412342 RAB5AP20339 215 aa8.58□□□□□ -1.04
HDAC8-210ENST00000412342 SMAGPQ0VAQ4 97 aa8.58□□□□□ -1.04
HDAC8-210ENST00000412342 FOXI1Q12951 378 aa8.58□□□□□ -1.04
HDAC8-210ENST00000412342 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
HDAC8-210ENST00000412342 RNASE13Q5GAN3 156 aaKnown RBP8.58□□□□□ -1.04
HDAC8-210ENST00000412342 DGAT2L7PQ6IED9 249 aa8.58□□□□□ -1.04
HDAC8-210ENST00000412342 C15orf56Q8N910 161 aa8.58□□□□□ -1.04
HDAC8-210ENST00000412342 SPANXA1Q9NS26 97 aa8.58□□□□□ -1.04
HDAC8-210ENST00000412342 K7EMI3 77 aa8.57□□□□□ -1.04
HDAC8-210ENST00000412342 IFI27P40305 119 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-210ENST00000412342 MRPS36P82909 103 aaKnown RBP8.57□□□□□ -1.04
HDAC8-210ENST00000412342 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-210ENST00000412342 NXT2Q9NPJ8 142 aaKnown RBP8.57□□□□□ -1.04
HDAC8-210ENST00000412342 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
HDAC8-210ENST00000412342 CCL25O15444 150 aa8.56□□□□□ -1.04
HDAC8-210ENST00000412342 XGP55808 180 aa8.56□□□□□ -1.04
HDAC8-210ENST00000412342 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
HDAC8-210ENST00000412342 XCL1P47992 114 aa8.55□□□□□ -1.04
HDAC8-210ENST00000412342 FABP9Q0Z7S8 132 aa8.55□□□□□ -1.04
HDAC8-210ENST00000412342 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
HDAC8-210ENST00000412342 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
HDAC8-210ENST00000412342 IGLV4-3A0A075B6K6 122 aa8.54□□□□□ -1.04
HDAC8-210ENST00000412342 SLPIP03973 132 aa8.54□□□□□ -1.04
HDAC8-210ENST00000412342 SS18Q15532 418 aa8.54□□□□□ -1.04
HDAC8-210ENST00000412342 CD164L2Q6UWJ8 174 aa8.54□□□□□ -1.04
HDAC8-210ENST00000412342 C2orf66Q6UXQ4 117 aa8.54□□□□□ -1.04
HDAC8-210ENST00000412342 Q6ZSA8 131 aa8.54□□□□□ -1.04
HDAC8-210ENST00000412342 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
HDAC8-210ENST00000412342 FAM30AQ9NZY2 134 aa8.54□□□□□ -1.04
HDAC8-210ENST00000412342 ABCA13Q86UQ4 5058 aa8.53□□□□□ -1.04
HDAC8-210ENST00000412342 C1orf196B1AJZ1 125 aa8.53□□□□□ -1.04
HDAC8-210ENST00000412342 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
HDAC8-210ENST00000412342 CYSLTR1Q9Y271 337 aa8.53□□□□□ -1.04
HDAC8-210ENST00000412342 TRAPPC1Q9Y5R8 145 aa8.53□□□□□ -1.04
HDAC8-210ENST00000412342 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
HDAC8-210ENST00000412342 TRAV13-1A0A0B4J241 112 aa8.52□□□□□ -1.05
HDAC8-210ENST00000412342 hDV102S1A0JD36 115 aa8.52□□□□□ -1.05
HDAC8-210ENST00000412342 IGIPA6NJ69 53 aa8.52□□□□□ -1.05
HDAC8-210ENST00000412342 LINC00173Q6ZV60 143 aa8.52□□□□□ -1.05
HDAC8-210ENST00000412342 URB1-AS1Q96HZ7 61 aa8.52□□□□□ -1.05
HDAC8-210ENST00000412342 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
HDAC8-210ENST00000412342 C9orf163Q8N9P6 203 aa8.51□□□□□ -1.05
HDAC8-210ENST00000412342 PRSS3P2Q8NHM4 247 aa8.51□□□□□ -1.05
HDAC8-210ENST00000412342 C18orf32Q8TCD1 76 aa8.51□□□□□ -1.05
HDAC8-210ENST00000412342 NPSP0C0P6 89 aa8.5□□□□□ -1.05
HDAC8-210ENST00000412342 HIGD2BQ4VC39 106 aa8.5□□□□□ -1.05
HDAC8-210ENST00000412342 CFAP161Q6P656 301 aa8.5□□□□□ -1.05
HDAC8-210ENST00000412342 TOMM6Q96B49 74 aa8.5□□□□□ -1.05
HDAC8-210ENST00000412342 TMEM141Q96I45 108 aa8.5□□□□□ -1.05
HDAC8-210ENST00000412342 AMELXQ99217 191 aa8.5□□□□□ -1.05
HDAC8-210ENST00000412342 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
HDAC8-210ENST00000412342 IGHV1-58A0A0C4DH39 117 aa8.49□□□□□ -1.05
HDAC8-210ENST00000412342 IFITM10A6NMD0 228 aa8.49□□□□□ -1.05
HDAC8-210ENST00000412342 HAMPP81172 84 aa8.49□□□□□ -1.05
HDAC8-210ENST00000412342 ZC2HC1BQ5TFG8 222 aa8.49□□□□□ -1.05
HDAC8-210ENST00000412342 TIMM17AQ99595 171 aa8.49□□□□□ -1.05
HDAC8-210ENST00000412342 A0A096LNJ9 63 aa8.48□□□□□ -1.05
HDAC8-210ENST00000412342 UBE2D1P51668 147 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms