RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 CLRN3Q8NCR9 226 aa11.76□□□□□ -0.53
PTPRN2-204ENST00000404321 NPYP01303 97 aa11.75□□□□□ -0.53
PTPRN2-204ENST00000404321 S100A1P23297 94 aa11.75□□□□□ -0.53
PTPRN2-204ENST00000404321 XCL1P47992 114 aa11.75□□□□□ -0.53
PTPRN2-204ENST00000404321 DGAT2L7PQ6IED9 249 aa11.75□□□□□ -0.53
PTPRN2-204ENST00000404321 C20orf78Q9BR46 151 aa11.75□□□□□ -0.53
PTPRN2-204ENST00000404321 TRBV24-1A0A075B6N3 115 aa11.74□□□□□ -0.53
PTPRN2-204ENST00000404321 ADCYAP1P18509 176 aa11.74□□□□□ -0.53
PTPRN2-204ENST00000404321 HIGD2BQ4VC39 106 aa11.74□□□□□ -0.53
PTPRN2-204ENST00000404321 ATP5L2Q7Z4Y8 100 aa11.74□□□□□ -0.53
PTPRN2-204ENST00000404321 MRPL52Q86TS9 123 aaKnown RBP11.74□□□□□ -0.53
PTPRN2-204ENST00000404321 C15orf56Q8N910 161 aa11.74□□□□□ -0.53
PTPRN2-204ENST00000404321 CHAC1Q9BUX1 264 aa11.74□□□□□ -0.53
PTPRN2-204ENST00000404321 CDC42SE2Q9NRR3 84 aa11.74□□□□□ -0.53
PTPRN2-204ENST00000404321 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
PTPRN2-204ENST00000404321 INAFM2P0DMQ5 153 aa11.73□□□□□ -0.53
PTPRN2-204ENST00000404321 RNASE13Q5GAN3 156 aaKnown RBP11.73□□□□□ -0.53
PTPRN2-204ENST00000404321 ZNF664Q8N3J9 261 aa11.73□□□□□ -0.53
PTPRN2-204ENST00000404321 C9orf163Q8N9P6 203 aa11.73□□□□□ -0.53
PTPRN2-204ENST00000404321 CIRBP-AS1Q8TBR5 109 aa11.73□□□□□ -0.53
PTPRN2-204ENST00000404321 ANAPC16Q96DE5 110 aa11.73□□□□□ -0.53
PTPRN2-204ENST00000404321 CCL25O15444 150 aa11.72□□□□□ -0.53
PTPRN2-204ENST00000404321 SLPIP03973 132 aa11.72□□□□□ -0.53
PTPRN2-204ENST00000404321 FOXI1Q12951 378 aa11.72□□□□□ -0.53
PTPRN2-204ENST00000404321 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
PTPRN2-204ENST00000404321 SMIM2Q9BVW6 85 aa11.72□□□□□ -0.53
PTPRN2-204ENST00000404321 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
PTPRN2-204ENST00000404321 CFAP161Q6P656 301 aa11.71□□□□□ -0.53
PTPRN2-204ENST00000404321 UBE2D4Q9Y2X8 147 aa11.71□□□□□ -0.53
PTPRN2-204ENST00000404321 TMEM218A2RU14 115 aa11.7□□□□□ -0.54
PTPRN2-204ENST00000404321 TCAPO15273 167 aa11.7□□□□□ -0.54
PTPRN2-204ENST00000404321 CNBPP62633 177 aaKnown RBP11.7□□□□□ -0.54
PTPRN2-204ENST00000404321 UQCC3Q6UW78 93 aa11.7□□□□□ -0.54
PTPRN2-204ENST00000404321 TMEM136Q6ZRR5 245 aa11.7□□□□□ -0.54
PTPRN2-204ENST00000404321 ORMDL3Q8N138 153 aa11.7□□□□□ -0.54
PTPRN2-204ENST00000404321 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
PTPRN2-204ENST00000404321 PPBPP02775 128 aa11.69□□□□□ -0.54
PTPRN2-204ENST00000404321 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
PTPRN2-204ENST00000404321 RPL32P62910 135 aaKnown RBP11.69□□□□□ -0.54
PTPRN2-204ENST00000404321 SS18Q15532 418 aa11.69□□□□□ -0.54
PTPRN2-204ENST00000404321 COMMD7Q86VX2 200 aa11.69□□□□□ -0.54
PTPRN2-204ENST00000404321 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.69□□□□□ -0.54
PTPRN2-204ENST00000404321 PANO1I0J062 215 aa11.68□□□□□ -0.54
PTPRN2-204ENST00000404321 SDIM1Q6ZPB5 146 aa11.68□□□□□ -0.54
PTPRN2-204ENST00000404321 Q6ZUT4 128 aa11.68□□□□□ -0.54
PTPRN2-204ENST00000404321 PHOX2AO14813 284 aa11.67□□□□□ -0.54
PTPRN2-204ENST00000404321 TMEM18Q96B42 140 aa11.67□□□□□ -0.54
PTPRN2-204ENST00000404321 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.67□□□□□ -0.54
PTPRN2-204ENST00000404321 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
PTPRN2-204ENST00000404321 SMAGPQ0VAQ4 97 aa11.67□□□□□ -0.54
PTPRN2-204ENST00000404321 CSDC2Q9Y534 153 aaKnown RBP11.67□□□□□ -0.54
PTPRN2-204ENST00000404321 SRRM2Q9UQ35 2752 aaKnown RBP11.66□□□□□ -0.54
PTPRN2-204ENST00000404321 IGHV3-64A0A075B6Q5 118 aa11.66□□□□□ -0.54
PTPRN2-204ENST00000404321 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
PTPRN2-204ENST00000404321 LINC00526Q96FQ7 95 aa11.66□□□□□ -0.54
PTPRN2-204ENST00000404321 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.55
PTPRN2-204ENST00000404321 PLA2G1BP04054 148 aaKnown RBP11.65□□□□□ -0.55
PTPRN2-204ENST00000404321 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.55
PTPRN2-204ENST00000404321 OPRPNQ99935 248 aaPredicted RBP11.65□□□□□ -0.55
PTPRN2-204ENST00000404321 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.55
PTPRN2-204ENST00000404321 CHTF8P0CG12 524 aa11.64□□□□□ -0.55
PTPRN2-204ENST00000404321 RAB5AP20339 215 aa11.64□□□□□ -0.55
PTPRN2-204ENST00000404321 SLC7A5P1Q8MH63 180 aa11.64□□□□□ -0.55
PTPRN2-204ENST00000404321 C1orf196B1AJZ1 125 aa11.63□□□□□ -0.55
PTPRN2-204ENST00000404321 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
PTPRN2-204ENST00000404321 VPS13BQ7Z7G8 4022 aa11.63□□□□□ -0.55
PTPRN2-204ENST00000404321 IGHV1-58A0A0C4DH39 117 aa11.62□□□□□ -0.55
PTPRN2-204ENST00000404321 FAM104AQ969W3 186 aa11.62□□□□□ -0.55
PTPRN2-204ENST00000404321 DPH3Q96FX2 82 aa11.62□□□□□ -0.55
PTPRN2-204ENST00000404321 CTDSP1Q9GZU7 261 aa11.62□□□□□ -0.55
PTPRN2-204ENST00000404321 MAP1LC3AQ9H492 121 aa11.62□□□□□ -0.55
PTPRN2-204ENST00000404321 FLG2Q5D862 2391 aaPredicted RBP11.61□□□□□ -0.55
PTPRN2-204ENST00000404321 COX6A2Q02221 97 aa11.61□□□□□ -0.55
PTPRN2-204ENST00000404321 IMMP2LQ96T52 175 aa11.61□□□□□ -0.55
PTPRN2-204ENST00000404321 SPANXA1Q9NS26 97 aa11.61□□□□□ -0.55
PTPRN2-204ENST00000404321 COX7A2LO14548 114 aa11.6□□□□□ -0.55
PTPRN2-204ENST00000404321 MALP21145 153 aa11.6□□□□□ -0.55
PTPRN2-204ENST00000404321 LAMTOR2Q9Y2Q5 125 aa11.6□□□□□ -0.55
PTPRN2-204ENST00000404321 KIAA1644Q3SXP7 199 aa11.59□□□□□ -0.55
PTPRN2-204ENST00000404321 C5orf38Q86SI9 138 aa11.59□□□□□ -0.55
PTPRN2-204ENST00000404321 PRSS3P2Q8NHM4 247 aa11.59□□□□□ -0.55
PTPRN2-204ENST00000404321 MYCBP2O75592 4640 aa11.59□□□□□ -0.55
PTPRN2-204ENST00000404321 Q8N8P6 123 aa11.58□□□□□ -0.56
PTPRN2-204ENST00000404321 IGKV2-24A0A0C4DH68 120 aa11.57□□□□□ -0.56
PTPRN2-204ENST00000404321 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
PTPRN2-204ENST00000404321 PRSS47A8MTI9 375 aa11.57□□□□□ -0.56
PTPRN2-204ENST00000404321 ZNF561-AS1K7EIQ3 104 aa11.57□□□□□ -0.56
PTPRN2-204ENST00000404321 CIRBPQ14011 172 aaKnown RBP11.57□□□□□ -0.56
PTPRN2-204ENST00000404321 SPACA4Q8TDM5 124 aa11.57□□□□□ -0.56
PTPRN2-204ENST00000404321 S100PP25815 95 aa11.56□□□□□ -0.56
PTPRN2-204ENST00000404321 IFI27P40305 119 aaPredicted RBP11.56□□□□□ -0.56
PTPRN2-204ENST00000404321 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
PTPRN2-204ENST00000404321 IGLV4-69A0A075B6H9 119 aa11.55□□□□□ -0.56
PTPRN2-204ENST00000404321 A0A087WYN8 130 aa11.55□□□□□ -0.56
PTPRN2-204ENST00000404321 KRTAP10-4P60372 401 aaPredicted RBP11.55□□□□□ -0.56
PTPRN2-204ENST00000404321 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
PTPRN2-204ENST00000404321 TRAV9-1A0A075B6T8 112 aa11.54□□□□□ -0.56
PTPRN2-204ENST00000404321 RPL37AP61513 92 aaKnown RBP11.54□□□□□ -0.56
PTPRN2-204ENST00000404321 SYCNQ0VAF6 134 aa11.54□□□□□ -0.56
PTPRN2-204ENST00000404321 MAJINQ3KP22 176 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms