RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ODF3Q96PU9 254 aa6.7□□□□□ -1.34
HPS4-203ENST00000402105 K7EMT4 169 aa6.7□□□□□ -1.34
HPS4-203ENST00000402105 NHLRC4P0CG21 123 aaPredicted RBP6.7□□□□□ -1.34
HPS4-203ENST00000402105 MIAQ16674 131 aa6.7□□□□□ -1.34
HPS4-203ENST00000402105 C11orf68Q9H3H3 251 aaKnown RBP6.7□□□□□ -1.34
HPS4-203ENST00000402105 H3BUA1 57 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 PSMB8P28062 276 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 COX6A2Q02221 97 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 TRBV7-9A0A0J9YWB2 115 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 TRBV30A0A0K0K1B3 111 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 Q9HAA7 133 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 ANKRD17O75179 2603 aaKnown RBP6.69□□□□□ -1.34
HPS4-203ENST00000402105 B4DSR2 109 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 PIK3CD-AS1Q5SR53 167 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 TMEM61Q8N0U2 210 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 FBN2P35556 2912 aa6.69□□□□□ -1.34
HPS4-203ENST00000402105 CHD6Q8TD26 2715 aa6.68□□□□□ -1.34
HPS4-203ENST00000402105 CITED1Q99966 193 aa6.68□□□□□ -1.34
HPS4-203ENST00000402105 MRPS36P82909 103 aaKnown RBP6.68□□□□□ -1.34
HPS4-203ENST00000402105 KLK9Q2XQG4 91 aa6.68□□□□□ -1.34
HPS4-203ENST00000402105 TMEM101Q96IK0 257 aa6.68□□□□□ -1.34
HPS4-203ENST00000402105 ZNF415Q09FC8 603 aa6.68□□□□□ -1.34
HPS4-203ENST00000402105 LITAFQ99732 161 aa6.68□□□□□ -1.34
HPS4-203ENST00000402105 YAE1D1Q9NRH1 226 aa6.68□□□□□ -1.34
HPS4-203ENST00000402105 UBE2D4Q9Y2X8 147 aa6.68□□□□□ -1.34
HPS4-203ENST00000402105 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.67□□□□□ -1.34
HPS4-203ENST00000402105 GAGE2AQ6NT46 116 aa6.67□□□□□ -1.34
HPS4-203ENST00000402105 MTORP42345 2549 aa6.67□□□□□ -1.34
HPS4-203ENST00000402105 FAM236AA0A1B0GUQ0 79 aa6.67□□□□□ -1.34
HPS4-203ENST00000402105 FAM236BA0A1B0GV22 79 aa6.67□□□□□ -1.34
HPS4-203ENST00000402105 LINC00694P0DN24 101 aa6.67□□□□□ -1.34
HPS4-203ENST00000402105 Q8N2B8 174 aa6.67□□□□□ -1.34
HPS4-203ENST00000402105 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
HPS4-203ENST00000402105 SVIPQ8NHG7 77 aa6.66□□□□□ -1.34
HPS4-203ENST00000402105 RBMY1BA6NDE4 496 aaKnown RBP6.66□□□□□ -1.34
HPS4-203ENST00000402105 RBMY1EA6NEQ0 496 aaKnown RBP6.66□□□□□ -1.34
HPS4-203ENST00000402105 RBMY1DP0C7P1 496 aaKnown RBP6.66□□□□□ -1.34
HPS4-203ENST00000402105 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
HPS4-203ENST00000402105 TINCRA0A1B0GVN0 87 aa6.65□□□□□ -1.34
HPS4-203ENST00000402105 CFAP46Q8IYW2 2715 aa6.65□□□□□ -1.34
HPS4-203ENST00000402105 UBE2L6O14933 153 aa6.65□□□□□ -1.34
HPS4-203ENST00000402105 HERV-K104P63124 156 aa6.65□□□□□ -1.34
HPS4-203ENST00000402105 LINC00308Q8TCZ7 52 aa6.65□□□□□ -1.34
HPS4-203ENST00000402105 USP24Q9UPU5 2620 aa6.65□□□□□ -1.35
HPS4-203ENST00000402105 LST1O00453 97 aa6.65□□□□□ -1.35
HPS4-203ENST00000402105 RNASE1P07998 156 aaKnown RBP6.65□□□□□ -1.35
HPS4-203ENST00000402105 BAALC-AS2P0C853 105 aa6.65□□□□□ -1.35
HPS4-203ENST00000402105 PFN2P35080 140 aa6.65□□□□□ -1.35
HPS4-203ENST00000402105 FAM104AQ969W3 186 aa6.65□□□□□ -1.35
HPS4-203ENST00000402105 MXRA5Q9NR99 2828 aa6.65□□□□□ -1.35
HPS4-203ENST00000402105 SPANXA1Q9NS26 97 aa6.64□□□□□ -1.35
HPS4-203ENST00000402105 TEX15Q9BXT5 2789 aa6.64□□□□□ -1.35
HPS4-203ENST00000402105 LINC00158P58513 81 aa6.64□□□□□ -1.35
HPS4-203ENST00000402105 DAZ2Q13117 558 aaKnown RBP6.64□□□□□ -1.35
HPS4-203ENST00000402105 DAZ4Q86SG3 579 aaKnown RBP6.64□□□□□ -1.35
HPS4-203ENST00000402105 DAZ3Q9NR90 486 aaKnown RBP6.64□□□□□ -1.35
HPS4-203ENST00000402105 NF1P21359 2839 aa6.64□□□□□ -1.35
HPS4-203ENST00000402105 STHQ8IWL8 128 aa6.64□□□□□ -1.35
HPS4-203ENST00000402105 CITED2Q99967 270 aaPredicted RBP6.64□□□□□ -1.35
HPS4-203ENST00000402105 PYGO1Q9Y3Y4 419 aa6.64□□□□□ -1.35
HPS4-203ENST00000402105 TRGV2A0A075B6R0 118 aa6.63□□□□□ -1.35
HPS4-203ENST00000402105 H3BT86 120 aa6.63□□□□□ -1.35
HPS4-203ENST00000402105 NIPBLQ6KC79 2804 aaeCLIP6.63□□□□□ -1.35
HPS4-203ENST00000402105 DOPEY1Q5JWR5 2465 aa6.63□□□□□ -1.35
HPS4-203ENST00000402105 ATP5G1P05496 136 aa6.63□□□□□ -1.35
HPS4-203ENST00000402105 Q6ZTI0 123 aa6.63□□□□□ -1.35
HPS4-203ENST00000402105 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
HPS4-203ENST00000402105 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
HPS4-203ENST00000402105 ACANP16112 2415 aa6.63□□□□□ -1.35
HPS4-203ENST00000402105 INSP01308 110 aa6.62□□□□□ -1.35
HPS4-203ENST00000402105 PLA2G2AP14555 144 aa6.62□□□□□ -1.35
HPS4-203ENST00000402105 RPL35AP18077 110 aaKnown RBP6.62□□□□□ -1.35
HPS4-203ENST00000402105 LINC00242Q5T6M2 205 aa6.62□□□□□ -1.35
HPS4-203ENST00000402105 NOP10Q9NPE3 64 aaKnown RBP6.62□□□□□ -1.35
HPS4-203ENST00000402105 DNAL4O96015 105 aa6.62□□□□□ -1.35
HPS4-203ENST00000402105 RPL36AP83881 106 aaKnown RBP6.62□□□□□ -1.35
HPS4-203ENST00000402105 RPL36ALQ969Q0 106 aaKnown RBP6.62□□□□□ -1.35
HPS4-203ENST00000402105 SOSTDC1Q6X4U4 206 aa6.62□□□□□ -1.35
HPS4-203ENST00000402105 MAP6D1Q9H9H5 199 aa6.62□□□□□ -1.35
HPS4-203ENST00000402105 LOC100131303A0A0U1RQF7 123 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 HECTD1Q9ULT8 2610 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 HERVK_113P63121 156 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 C9orf153Q5TBE3 101 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 LINC01356Q8N9X3 169 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 VPREB3Q9UKI3 123 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 CLPSL2Q6UWE3 100 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 C5orf38Q86SI9 138 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 EDA2RQ9HAV5 297 aa6.61□□□□□ -1.35
HPS4-203ENST00000402105 NBEAL2Q6ZNJ1 2754 aa6.6□□□□□ -1.35
HPS4-203ENST00000402105 NDUFA1O15239 70 aa6.6□□□□□ -1.35
HPS4-203ENST00000402105 PAX4O43316 350 aa6.6□□□□□ -1.35
HPS4-203ENST00000402105 SLPIP03973 132 aa6.6□□□□□ -1.35
HPS4-203ENST00000402105 CRPP02741 224 aa6.6□□□□□ -1.35
HPS4-203ENST00000402105 MIR7-3HGQ8N6C7 128 aa6.6□□□□□ -1.35
HPS4-203ENST00000402105 PEMTQ9UBM1 199 aa6.6□□□□□ -1.35
HPS4-203ENST00000402105 A0A096LPF7 62 aa6.59□□□□□ -1.35
HPS4-203ENST00000402105 COX7A2LO14548 114 aa6.59□□□□□ -1.35
HPS4-203ENST00000402105 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
HPS4-203ENST00000402105 FAM218AQ96MZ4 157 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms