RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 FSHBP01225 129 aa6.59□□□□□ -1.36
CACNA1C-220ENST00000399655 CSNK1G2-AS1Q8NCQ2 148 aa6.59□□□□□ -1.36
CACNA1C-220ENST00000399655 M0R378 163 aa6.59□□□□□ -1.36
CACNA1C-220ENST00000399655 TRBV6-1A0A0K0K1D8 114 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 C4orf3Q8WVX3 66 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 C7orf65Q6ZTY9 151 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 Q8TCH9 128 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 CTSZQ9UBR2 303 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 A0A0G2JRQ6 117 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 LY6LH3BQJ8 138 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 C11orf45Q8TAV5 145 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 SSBP3-AS1Q7Z2R9 100 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 P0C879 139 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 ERC2-IT1O76042 136 aa6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 EIF4EBP1Q13541 118 aaPredicted RBP6.58□□□□□ -1.36
CACNA1C-220ENST00000399655 SPINK1P00995 79 aa6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 COL5A1P20908 1838 aaPredicted RBP6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 A0A087WV48 116 aa6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 C5orf67F2Z3F1 127 aa6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 LYNX1G3V0Z9 82 aa6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 LYNX1P0DP58 116 aa6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 FASNP49327 2511 aaKnown RBP6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 C19orf71A6NCJ1 209 aa6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 PATE3B3GLJ2 98 aa6.57□□□□□ -1.36
CACNA1C-220ENST00000399655 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
CACNA1C-220ENST00000399655 C4orf51C9J302 202 aa6.56□□□□□ -1.36
CACNA1C-220ENST00000399655 RNF223E7ERA6 249 aa6.56□□□□□ -1.36
CACNA1C-220ENST00000399655 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
CACNA1C-220ENST00000399655 C22orf34Q6ZV56 151 aa6.56□□□□□ -1.36
CACNA1C-220ENST00000399655 LINC01547P58512 204 aaPredicted RBP6.56□□□□□ -1.36
CACNA1C-220ENST00000399655 ZNF843Q8N446 348 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 DNAJC9-AS1A6NH13 148 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 LINC00308Q8TCZ7 52 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 ZNF73O43830 326 aaPredicted RBP6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 G3V318 75 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 C20orf203Q8NBC4 194 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 SYCNQ0VAF6 134 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 SPRR3Q9UBC9 169 aa6.55□□□□□ -1.36
CACNA1C-220ENST00000399655 LOC100131303A0A0U1RQF7 123 aa6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 Q96MF0 132 aa6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 DMBT1Q9UGM3 2413 aaPredicted RBP6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 WISP3O95389 354 aaPredicted RBP6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 CHCHD10Q8WYQ3 142 aaPredicted RBP6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 WDR87Q6ZQQ6 2873 aa6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 COL24A1Q17RW2 1714 aa6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 HCG22E2RYF7 251 aa6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 SHISA4Q96DD7 197 aa6.54□□□□□ -1.36
CACNA1C-220ENST00000399655 RUSC1-AS1Q66K80 236 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 CD164L2Q6UWJ8 174 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 IGHV6-1A0A0B4J1U7 121 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 ATP1A1-AS1Q5TC04 95 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 CR1P17927 2039 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 ODF3Q96PU9 254 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 TP73-AS1Q9UF72 201 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 TDRG1Q3Y452 100 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 K7EMT4 169 aa6.53□□□□□ -1.36
CACNA1C-220ENST00000399655 CSRP1P21291 193 aaKnown RBP6.52□□□□□ -1.36
CACNA1C-220ENST00000399655 CD164Q04900 197 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 Q6ZTC4 211 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 IGKV1D-43A0A0B4J1Z2 117 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 RPS28P62857 69 aaKnown RBP6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 USP24Q9UPU5 2620 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 TMEM89A2RUT3 159 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 USP9YO00507 2555 aaPredicted RBP6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 IGLV3-12A0A075B6K2 115 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 DEFB135Q30KP9 77 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 JMJD1CQ15652 2540 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 TFF2Q03403 129 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 LINC00337Q8N6G1 96 aa6.52□□□□□ -1.37
CACNA1C-220ENST00000399655 H3BPC8 53 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 MDFIQ99750 246 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 NTM-AS1Q6ZSK4 140 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 MRPS12O15235 138 aaKnown RBP6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 C1orf137Q5JT78 98 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 Q9BRP9 147 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 C6orf48Q9UBA6 75 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 IGLV3-19P01714 112 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 WT1-ASQ06250 92 aa6.51□□□□□ -1.37
CACNA1C-220ENST00000399655 CIRBP-AS1Q8TBR5 109 aa6.5□□□□□ -1.37
CACNA1C-220ENST00000399655 SLPIP03973 132 aa6.5□□□□□ -1.37
CACNA1C-220ENST00000399655 C11orf53Q8IXP5 236 aa6.5□□□□□ -1.37
CACNA1C-220ENST00000399655 Q8N3U1 123 aa6.5□□□□□ -1.37
CACNA1C-220ENST00000399655 FOXL2NBQ6ZUU3 175 aa6.5□□□□□ -1.37
CACNA1C-220ENST00000399655 NEXN-AS1Q8NBZ9 246 aa6.5□□□□□ -1.37
CACNA1C-220ENST00000399655 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
CACNA1C-220ENST00000399655 ZFHX2Q9C0A1 2572 aaPredicted RBP6.49□□□□□ -1.37
CACNA1C-220ENST00000399655 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
CACNA1C-220ENST00000399655 IGKV2D-28P01615 120 aa6.49□□□□□ -1.37
CACNA1C-220ENST00000399655 C1orf64Q8NEQ6 169 aa6.49□□□□□ -1.37
CACNA1C-220ENST00000399655 MYCNOSP40205 109 aa6.49□□□□□ -1.37
CACNA1C-220ENST00000399655 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
CACNA1C-220ENST00000399655 ARTNQ5T4W7 220 aa6.49□□□□□ -1.37
CACNA1C-220ENST00000399655 A0A0A0MQY5 61 aa6.49□□□□□ -1.37
CACNA1C-220ENST00000399655 CYP4F30PQ9H0H9 118 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms