RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-219ENST00000399649 Q8NA96 180 aa9.1□□□□□ -0.95
CACNA1C-219ENST00000399649 POLEQ07864 2286 aa9.1□□□□□ -0.95
CACNA1C-219ENST00000399649 DIDO1Q9BTC0 2240 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-219ENST00000399649 TSHBP01222 138 aa9.1□□□□□ -0.95
CACNA1C-219ENST00000399649 LINC00574Q9H8X3 128 aa9.1□□□□□ -0.95
CACNA1C-219ENST00000399649 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 CACNA1BQ00975 2339 aa9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 ZNF843Q8N446 348 aa9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 FAM186AA6NE01 2351 aa9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 PLXNB3Q9ULL4 1909 aa9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 A8MZ25 164 aa9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 P0C879 139 aa9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 PRYO14603 147 aa9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 A0A1W2PNU3 283 aaPredicted RBP9.09□□□□□ -0.95
CACNA1C-219ENST00000399649 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
CACNA1C-219ENST00000399649 COX7CP15954 63 aa9.08□□□□□ -0.96
CACNA1C-219ENST00000399649 LY6G6DO95868 133 aa9.08□□□□□ -0.96
CACNA1C-219ENST00000399649 MBD6Q96DN6 1003 aa9.08□□□□□ -0.96
CACNA1C-219ENST00000399649 ZNF407Q9C0G0 2248 aa9.08□□□□□ -0.96
CACNA1C-219ENST00000399649 LST1O00453 97 aa9.07□□□□□ -0.96
CACNA1C-219ENST00000399649 RPL28P46779 137 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-219ENST00000399649 CRIP1P50238 77 aa9.07□□□□□ -0.96
CACNA1C-219ENST00000399649 CIRBP-AS1Q8TBR5 109 aa9.07□□□□□ -0.96
CACNA1C-219ENST00000399649 MRPS36P82909 103 aaKnown RBP9.07□□□□□ -0.96
CACNA1C-219ENST00000399649 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
CACNA1C-219ENST00000399649 X6R8D5 127 aa9.06□□□□□ -0.96
CACNA1C-219ENST00000399649 Q6JHZ5 121 aa9.06□□□□□ -0.96
CACNA1C-219ENST00000399649 ZNF702PQ9H963 129 aa9.06□□□□□ -0.96
CACNA1C-219ENST00000399649 DENND4CQ5VZ89 1909 aa9.06□□□□□ -0.96
CACNA1C-219ENST00000399649 EBI3Q14213 229 aa9.06□□□□□ -0.96
CACNA1C-219ENST00000399649 MUC7Q8TAX7 377 aa9.06□□□□□ -0.96
CACNA1C-219ENST00000399649 PSMG3-AS1Q96PY0 264 aa9.05□□□□□ -0.96
CACNA1C-219ENST00000399649 ZNF106Q9H2Y7 1883 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-219ENST00000399649 M0QXV9 152 aa9.05□□□□□ -0.96
CACNA1C-219ENST00000399649 CADP27708 2225 aa9.05□□□□□ -0.96
CACNA1C-219ENST00000399649 USF3Q68DE3 2245 aa9.05□□□□□ -0.96
CACNA1C-219ENST00000399649 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-219ENST00000399649 Q8IZM0 81 aa9.05□□□□□ -0.96
CACNA1C-219ENST00000399649 FSTL3O95633 263 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 TP73-AS1Q9UF72 201 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 REG3GQ6UW15 175 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 TRBV7-6A0A0J9YX20 115 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 C10orf99Q6UWK7 81 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 CCDC179H3BU77 68 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 RETNLBQ9BQ08 111 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 ADAMTS9Q9P2N4 1935 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 ABCA4P78363 2273 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 CELA1Q9UNI1 258 aa9.04□□□□□ -0.96
CACNA1C-219ENST00000399649 CACNA1EQ15878 2313 aa9.03□□□□□ -0.96
CACNA1C-219ENST00000399649 SMIM26A0A096LP01 95 aa9.03□□□□□ -0.96
CACNA1C-219ENST00000399649 C1orf229Q6ZS94 237 aaPredicted RBP9.03□□□□□ -0.96
CACNA1C-219ENST00000399649 NRACQ8N912 160 aa9.03□□□□□ -0.96
CACNA1C-219ENST00000399649 IGHV6-1A0A0B4J1U7 121 aa9.02□□□□□ -0.96
CACNA1C-219ENST00000399649 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 RNASE3P12724 160 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 POM121L12Q8N7R1 296 aa9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 ZDBF2Q9HCK1 2354 aa9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 WISP2O76076 250 aa9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 LINC00208Q96KT6 92 aa9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 EIF4EBP1Q13541 118 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 BRWD1-AS2P59051 145 aa9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 COL6A6A6NMZ7 2263 aa9.01□□□□□ -0.97
CACNA1C-219ENST00000399649 CYSRT1A8MQ03 144 aa9□□□□□ -0.97
CACNA1C-219ENST00000399649 MRGPRG-AS1Q2M3A8 158 aa9□□□□□ -0.97
CACNA1C-219ENST00000399649 C18orf65Q6ZTR6 163 aa9□□□□□ -0.97
CACNA1C-219ENST00000399649 SPTBN1Q01082 2364 aaKnown RBP9□□□□□ -0.97
CACNA1C-219ENST00000399649 LINC00694P0DN24 101 aa9□□□□□ -0.97
CACNA1C-219ENST00000399649 SPTA1P02549 2419 aa9□□□□□ -0.97
CACNA1C-219ENST00000399649 PMAIP1Q13794 54 aa9□□□□□ -0.97
CACNA1C-219ENST00000399649 GTF3C1Q12789 2109 aa8.99□□□□□ -0.97
CACNA1C-219ENST00000399649 C1orf137Q5JT78 98 aa8.99□□□□□ -0.97
CACNA1C-219ENST00000399649 Q6Q795 121 aa8.99□□□□□ -0.97
CACNA1C-219ENST00000399649 C11orf71Q6IPW1 123 aa8.99□□□□□ -0.97
CACNA1C-219ENST00000399649 NTM-AS1Q6ZSK4 140 aa8.99□□□□□ -0.97
CACNA1C-219ENST00000399649 LINC01006Q8NI28 216 aa8.98□□□□□ -0.97
CACNA1C-219ENST00000399649 SERTAD4-AS1Q5TG53 156 aa8.98□□□□□ -0.97
CACNA1C-219ENST00000399649 CDC42SE2Q9NRR3 84 aa8.98□□□□□ -0.97
CACNA1C-219ENST00000399649 IGLV2-11P01706 119 aa8.98□□□□□ -0.97
CACNA1C-219ENST00000399649 Q6ZS46 218 aa8.98□□□□□ -0.97
CACNA1C-219ENST00000399649 Q8N814 137 aa8.97□□□□□ -0.97
CACNA1C-219ENST00000399649 PRR9Q5T870 116 aa8.97□□□□□ -0.97
CACNA1C-219ENST00000399649 KLLNB2CW77 178 aa8.97□□□□□ -0.97
CACNA1C-219ENST00000399649 KIAA1549LQ6ZVL6 1849 aa8.96□□□□□ -0.97
CACNA1C-219ENST00000399649 SPINK1P00995 79 aa8.96□□□□□ -0.97
CACNA1C-219ENST00000399649 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.97
CACNA1C-219ENST00000399649 EGFEM1PQ0D2K5 195 aa8.96□□□□□ -0.98
CACNA1C-219ENST00000399649 C2orf91Q6ZV80 131 aa8.96□□□□□ -0.98
CACNA1C-219ENST00000399649 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
CACNA1C-219ENST00000399649 PCOTHQ58A44 107 aa8.95□□□□□ -0.98
CACNA1C-219ENST00000399649 FSHBP01225 129 aa8.95□□□□□ -0.98
CACNA1C-219ENST00000399649 PRM2P04554 102 aa8.95□□□□□ -0.98
CACNA1C-219ENST00000399649 C6orf223Q8N319 242 aa8.95□□□□□ -0.98
CACNA1C-219ENST00000399649 MALRD1Q5VYJ5 2156 aa8.95□□□□□ -0.98
CACNA1C-219ENST00000399649 WNK2Q9Y3S1 2297 aa8.95□□□□□ -0.98
CACNA1C-219ENST00000399649 LINC01547P58512 204 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-219ENST00000399649 Q9BRP9 147 aa8.94□□□□□ -0.98
CACNA1C-219ENST00000399649 MED13Q9UHV7 2174 aa8.94□□□□□ -0.98
CACNA1C-219ENST00000399649 LINC01556Q5JQF7 62 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms