RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 IGLV9-49A0A0B4J1Y8 123 aa8.39□□□□□ -1.07
TTC28-201ENST00000397906 FAM236AA0A1B0GUQ0 79 aa8.39□□□□□ -1.07
TTC28-201ENST00000397906 FAM236BA0A1B0GV22 79 aa8.39□□□□□ -1.07
TTC28-201ENST00000397906 PTPRSQ13332 1948 aa8.39□□□□□ -1.07
TTC28-201ENST00000397906 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
TTC28-201ENST00000397906 PRR14LQ5THK1 2151 aa8.39□□□□□ -1.07
TTC28-201ENST00000397906 FSTL3O95633 263 aa8.38□□□□□ -1.07
TTC28-201ENST00000397906 TMEM258P61165 79 aa8.38□□□□□ -1.07
TTC28-201ENST00000397906 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
TTC28-201ENST00000397906 A8MZ25 164 aa8.38□□□□□ -1.07
TTC28-201ENST00000397906 M0QY20 66 aa8.38□□□□□ -1.07
TTC28-201ENST00000397906 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
TTC28-201ENST00000397906 IGLC6P0CF74 106 aa8.37□□□□□ -1.07
TTC28-201ENST00000397906 RBX1P62877 108 aa8.37□□□□□ -1.07
TTC28-201ENST00000397906 CRIP3Q6Q6R5 217 aa8.37□□□□□ -1.07
TTC28-201ENST00000397906 C11orf1Q9H5F2 150 aa8.37□□□□□ -1.07
TTC28-201ENST00000397906 WFDC2Q14508 124 aa8.37□□□□□ -1.07
TTC28-201ENST00000397906 CSPG4Q6UVK1 2322 aa8.36□□□□□ -1.07
TTC28-201ENST00000397906 C1orf158Q8N1D5 194 aa8.36□□□□□ -1.07
TTC28-201ENST00000397906 EIF4EBP1Q13541 118 aaPredicted RBP8.36□□□□□ -1.07
TTC28-201ENST00000397906 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
TTC28-201ENST00000397906 NUPR2A6NF83 97 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 PRR9Q5T870 116 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 IGLV1-40P01703 118 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 IGLV2-8P01709 118 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 CRIP1P50238 77 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 BPY2O14599 106 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 TEN1Q86WV5 123 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 PTH2Q96A98 100 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 SPANXDQ9BXN6 97 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 HIVEP3Q5T1R4 2406 aa8.35□□□□□ -1.07
TTC28-201ENST00000397906 PRRC2AP48634 2157 aaKnown RBP8.35□□□□□ -1.07
TTC28-201ENST00000397906 KIR2DL5BA0A0G2JN68 375 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 KIR2DL5BA0A0G2JPC4 375 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 KIR2DL5AQ8N109 375 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 TMEM223A0PJW6 202 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 ACACBO00763 2458 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 TCL1BO95988 128 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 Q8N6K4 173 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 LRP4O75096 1905 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 ARHGAP32A7KAX9 2087 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 TRAV23DV6A0A075B6W5 121 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 UPK3BQ9BT76 320 aa8.34□□□□□ -1.07
TTC28-201ENST00000397906 LELP1Q5T871 98 aa8.33□□□□□ -1.08
TTC28-201ENST00000397906 ANKHD1Q8IWZ3 2542 aaKnown RBP8.33□□□□□ -1.08
TTC28-201ENST00000397906 PLAC8L1A1L4L8 177 aa8.33□□□□□ -1.08
TTC28-201ENST00000397906 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
TTC28-201ENST00000397906 GOLGB1Q14789 3259 aaKnown RBP8.33□□□□□ -1.08
TTC28-201ENST00000397906 SONP18583 2426 aaKnown RBP8.32□□□□□ -1.08
TTC28-201ENST00000397906 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
TTC28-201ENST00000397906 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
TTC28-201ENST00000397906 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
TTC28-201ENST00000397906 B5MCH6 92 aa8.32□□□□□ -1.08
TTC28-201ENST00000397906 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
TTC28-201ENST00000397906 RNASE3P12724 160 aaKnown RBP8.32□□□□□ -1.08
TTC28-201ENST00000397906 IBA57-AS1B1ANH7 110 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 UBE2D2P62837 147 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 C6orf99Q4VX62 202 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 SS18L2Q9UHA2 77 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 CD164L2Q6UWJ8 174 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 LINC00308Q8TCZ7 52 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 EXPH5Q8NEV8 1989 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 IGLV4-69A0A075B6H9 119 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 HCFC1P51610 2035 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 NDUFA7O95182 113 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 IGLV5-52A0A0A0MRZ9 124 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 TP73-AS1Q9UF72 201 aa8.31□□□□□ -1.08
TTC28-201ENST00000397906 ZNF706Q9Y5V0 76 aaPredicted RBP8.31□□□□□ -1.08
TTC28-201ENST00000397906 MLST8Q9BVC4 326 aa8.3□□□□□ -1.08
TTC28-201ENST00000397906 ATOX1O00244 68 aa8.3□□□□□ -1.08
TTC28-201ENST00000397906 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
TTC28-201ENST00000397906 Q6ZTC4 211 aa8.3□□□□□ -1.08
TTC28-201ENST00000397906 CCKP06307 115 aa8.3□□□□□ -1.08
TTC28-201ENST00000397906 MBD6Q96DN6 1003 aa8.3□□□□□ -1.08
TTC28-201ENST00000397906 U3KQK5 164 aa8.3□□□□□ -1.08
TTC28-201ENST00000397906 TSHBP01222 138 aa8.29□□□□□ -1.08
TTC28-201ENST00000397906 COA6Q5JTJ3 125 aaKnown RBP8.29□□□□□ -1.08
TTC28-201ENST00000397906 SDIM1Q6ZPB5 146 aa8.29□□□□□ -1.08
TTC28-201ENST00000397906 RNF185Q96GF1 192 aa8.29□□□□□ -1.08
TTC28-201ENST00000397906 ADAMTS20P59510 1910 aa8.29□□□□□ -1.08
TTC28-201ENST00000397906 C11orf21Q9P2W6 132 aa8.28□□□□□ -1.08
TTC28-201ENST00000397906 MRGPRG-AS1Q2M3A8 158 aa8.28□□□□□ -1.08
TTC28-201ENST00000397906 A0A1W2PPR1 153 aa8.28□□□□□ -1.08
TTC28-201ENST00000397906 TAX1BP3O14907 124 aa8.28□□□□□ -1.08
TTC28-201ENST00000397906 TRBV6-5A0A0K0K1A5 114 aa8.28□□□□□ -1.08
TTC28-201ENST00000397906 IGLV2-11P01706 119 aa8.28□□□□□ -1.08
TTC28-201ENST00000397906 LINC00474Q9P2X8 69 aa8.28□□□□□ -1.08
TTC28-201ENST00000397906 PDE6GP18545 87 aa8.28□□□□□ -1.08
TTC28-201ENST00000397906 H3BT86 120 aa8.27□□□□□ -1.08
TTC28-201ENST00000397906 CIRBP-AS1Q8TBR5 109 aa8.27□□□□□ -1.09
TTC28-201ENST00000397906 ENHOQ6UWT2 76 aa8.27□□□□□ -1.09
TTC28-201ENST00000397906 SORL1Q92673 2214 aa8.27□□□□□ -1.09
TTC28-201ENST00000397906 ATG2AQ2TAZ0 1938 aa8.27□□□□□ -1.09
TTC28-201ENST00000397906 M0QXV9 152 aa8.26□□□□□ -1.09
TTC28-201ENST00000397906 ODF3L2Q3SX64 289 aa8.26□□□□□ -1.09
TTC28-201ENST00000397906 M0R378 163 aa8.26□□□□□ -1.09
TTC28-201ENST00000397906 KLLNB2CW77 178 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms