RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TMEM18Q96B42 140 aa9.05□□□□□ -0.96
SEC13-204ENST00000397099 CSDC2Q9Y534 153 aaKnown RBP9.05□□□□□ -0.96
SEC13-204ENST00000397099 TRBV24-1A0A075B6N3 115 aa9.04□□□□□ -0.96
SEC13-204ENST00000397099 CKS2P33552 79 aa9.04□□□□□ -0.96
SEC13-204ENST00000397099 RPS10P46783 165 aaKnown RBP9.04□□□□□ -0.96
SEC13-204ENST00000397099 LINC01620Q4KN68 170 aa9.04□□□□□ -0.96
SEC13-204ENST00000397099 MRPL51Q4U2R6 128 aaKnown RBP9.04□□□□□ -0.96
SEC13-204ENST00000397099 SCXQ7RTU7 201 aa9.04□□□□□ -0.96
SEC13-204ENST00000397099 NRACQ8N912 160 aa9.04□□□□□ -0.96
SEC13-204ENST00000397099 TMEM242Q9NWH2 141 aa9.04□□□□□ -0.96
SEC13-204ENST00000397099 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
SEC13-204ENST00000397099 PHOX2AO14813 284 aa9.03□□□□□ -0.96
SEC13-204ENST00000397099 CHCHD10Q8WYQ3 142 aaPredicted RBP9.03□□□□□ -0.96
SEC13-204ENST00000397099 ANAPC16Q96DE5 110 aa9.03□□□□□ -0.96
SEC13-204ENST00000397099 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.97
SEC13-204ENST00000397099 GAS8-AS1O95177 125 aa9.02□□□□□ -0.97
SEC13-204ENST00000397099 MT-ND4LP03901 98 aa9.02□□□□□ -0.97
SEC13-204ENST00000397099 SS18Q15532 418 aa9.02□□□□□ -0.97
SEC13-204ENST00000397099 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
SEC13-204ENST00000397099 PKIGQ9Y2B9 76 aa9.02□□□□□ -0.97
SEC13-204ENST00000397099 IGKV3OR2-268A0A0C4DH90 116 aa9.01□□□□□ -0.97
SEC13-204ENST00000397099 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
SEC13-204ENST00000397099 CLLU1Q5K131 121 aa9.01□□□□□ -0.97
SEC13-204ENST00000397099 ZNF664Q8N3J9 261 aa9.01□□□□□ -0.97
SEC13-204ENST00000397099 CIRBP-AS1Q8TBR5 109 aa9.01□□□□□ -0.97
SEC13-204ENST00000397099 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
SEC13-204ENST00000397099 MYCBP2O75592 4640 aa9.01□□□□□ -0.97
SEC13-204ENST00000397099 DMBT1Q9UGM3 2413 aaPredicted RBP9□□□□□ -0.97
SEC13-204ENST00000397099 LINC00959A0A1B0GUT2 108 aa9□□□□□ -0.97
SEC13-204ENST00000397099 C1orf196B1AJZ1 125 aa9□□□□□ -0.97
SEC13-204ENST00000397099 SMKR1H3BMG3 65 aa9□□□□□ -0.97
SEC13-204ENST00000397099 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
SEC13-204ENST00000397099 GVQW2A0A096LPI5 108 aaPredicted RBP8.99□□□□□ -0.97
SEC13-204ENST00000397099 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
SEC13-204ENST00000397099 MRPL54Q6P161 138 aaKnown RBP8.99□□□□□ -0.97
SEC13-204ENST00000397099 UQCC3Q6UW78 93 aa8.99□□□□□ -0.97
SEC13-204ENST00000397099 CD164L2Q6UWJ8 174 aa8.99□□□□□ -0.97
SEC13-204ENST00000397099 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
SEC13-204ENST00000397099 ORMDL3Q8N138 153 aa8.99□□□□□ -0.97
SEC13-204ENST00000397099 LAMTOR2Q9Y2Q5 125 aa8.99□□□□□ -0.97
SEC13-204ENST00000397099 IGHV1-58A0A0C4DH39 117 aa8.98□□□□□ -0.97
SEC13-204ENST00000397099 D6R8Y8 96 aa8.98□□□□□ -0.97
SEC13-204ENST00000397099 J3QL48 77 aa8.98□□□□□ -0.97
SEC13-204ENST00000397099 FOXI1Q12951 378 aa8.98□□□□□ -0.97
SEC13-204ENST00000397099 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
SEC13-204ENST00000397099 UBE2D4Q9Y2X8 147 aa8.98□□□□□ -0.97
SEC13-204ENST00000397099 XCL1P47992 114 aa8.97□□□□□ -0.97
SEC13-204ENST00000397099 SMIM2Q9BVW6 85 aa8.97□□□□□ -0.97
SEC13-204ENST00000397099 HERC1Q15751 4861 aa8.96□□□□□ -0.97
SEC13-204ENST00000397099 CIRBPQ14011 172 aaKnown RBP8.96□□□□□ -0.98
SEC13-204ENST00000397099 TMEM136Q6ZRR5 245 aa8.96□□□□□ -0.98
SEC13-204ENST00000397099 IMMP2LQ96T52 175 aa8.96□□□□□ -0.98
SEC13-204ENST00000397099 RAB5AP20339 215 aa8.95□□□□□ -0.98
SEC13-204ENST00000397099 SPANXA1Q9NS26 97 aa8.95□□□□□ -0.98
SEC13-204ENST00000397099 LINC00474Q9P2X8 69 aa8.95□□□□□ -0.98
SEC13-204ENST00000397099 FLG2Q5D862 2391 aaPredicted RBP8.95□□□□□ -0.98
SEC13-204ENST00000397099 PRSS47A8MTI9 375 aa8.94□□□□□ -0.98
SEC13-204ENST00000397099 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
SEC13-204ENST00000397099 SLPIP03973 132 aa8.94□□□□□ -0.98
SEC13-204ENST00000397099 MALP21145 153 aa8.94□□□□□ -0.98
SEC13-204ENST00000397099 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
SEC13-204ENST00000397099 K7EMI3 77 aa8.93□□□□□ -0.98
SEC13-204ENST00000397099 COX7A2LO14548 114 aa8.93□□□□□ -0.98
SEC13-204ENST00000397099 APOMO95445 188 aa8.93□□□□□ -0.98
SEC13-204ENST00000397099 NPYP01303 97 aa8.93□□□□□ -0.98
SEC13-204ENST00000397099 MRPS36P82909 103 aaKnown RBP8.93□□□□□ -0.98
SEC13-204ENST00000397099 HIGD2BQ4VC39 106 aa8.93□□□□□ -0.98
SEC13-204ENST00000397099 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
SEC13-204ENST00000397099 CTDSP1Q9GZU7 261 aa8.93□□□□□ -0.98
SEC13-204ENST00000397099 TRAV9-1A0A075B6T8 112 aa8.92□□□□□ -0.98
SEC13-204ENST00000397099 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.92□□□□□ -0.98
SEC13-204ENST00000397099 TMEM218A2RU14 115 aa8.91□□□□□ -0.98
SEC13-204ENST00000397099 G0S2P27469 103 aa8.91□□□□□ -0.98
SEC13-204ENST00000397099 RPL37AP61513 92 aaKnown RBP8.91□□□□□ -0.98
SEC13-204ENST00000397099 SPACA4Q8TDM5 124 aa8.91□□□□□ -0.98
SEC13-204ENST00000397099 MAP1LC3AQ9H492 121 aa8.91□□□□□ -0.98
SEC13-204ENST00000397099 PYGO1Q9Y3Y4 419 aa8.91□□□□□ -0.98
SEC13-204ENST00000397099 TRAV13-1A0A0B4J241 112 aa8.9□□□□□ -0.98
SEC13-204ENST00000397099 IFI27P40305 119 aaPredicted RBP8.9□□□□□ -0.98
SEC13-204ENST00000397099 CARD19Q96LW7 228 aa8.9□□□□□ -0.98
SEC13-204ENST00000397099 SEC11CQ9BY50 192 aa8.9□□□□□ -0.98
SEC13-204ENST00000397099 F8WDY8 70 aa8.89□□□□□ -0.99
SEC13-204ENST00000397099 RPL39P62891 51 aaKnown RBP8.89□□□□□ -0.99
SEC13-204ENST00000397099 COX6A2Q02221 97 aa8.89□□□□□ -0.99
SEC13-204ENST00000397099 Q6ZUT4 128 aa8.89□□□□□ -0.99
SEC13-204ENST00000397099 PLAC8Q9NZF1 115 aa8.89□□□□□ -0.99
SEC13-204ENST00000397099 A0A087WYN8 130 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 NPSP0C0P6 89 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 S100PP25815 95 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 IFITM2Q01629 132 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 SYCNQ0VAF6 134 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 ORMDL2Q53FV1 153 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 Q8N8P6 123 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 OR10D4PQ8NGN7 298 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 C7orf33Q8WU49 177 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
SEC13-204ENST00000397099 KRTAP29-1A8MX34 341 aaPredicted RBP8.87□□□□□ -0.99
SEC13-204ENST00000397099 KRTAP10-4P60372 401 aaPredicted RBP8.87□□□□□ -0.99
SEC13-204ENST00000397099 NXT2Q9NPJ8 142 aaKnown RBP8.87□□□□□ -0.99
SEC13-204ENST00000397099 PKHD1L1Q86WI1 4243 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms