RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SERP1Q9Y6X1 66 aa12.89□□□□□ -0.35
MCF2L-208ENST00000397030 C6orf99Q4VX62 202 aa12.89□□□□□ -0.35
MCF2L-208ENST00000397030 C1orf229Q6ZS94 237 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-208ENST00000397030 BRK1Q8WUW1 75 aa12.89□□□□□ -0.35
MCF2L-208ENST00000397030 PTH2Q96A98 100 aa12.89□□□□□ -0.35
MCF2L-208ENST00000397030 A8MZ25 164 aa12.88□□□□□ -0.35
MCF2L-208ENST00000397030 TNCP24821 2201 aa12.88□□□□□ -0.35
MCF2L-208ENST00000397030 C10orf91Q5T1B1 145 aa12.88□□□□□ -0.35
MCF2L-208ENST00000397030 SMIM20Q8N5G0 67 aa12.88□□□□□ -0.35
MCF2L-208ENST00000397030 C1orf134Q5TEV5 83 aa12.88□□□□□ -0.35
MCF2L-208ENST00000397030 HIVEP2P31629 2446 aa12.88□□□□□ -0.35
MCF2L-208ENST00000397030 M0QXV9 152 aa12.87□□□□□ -0.35
MCF2L-208ENST00000397030 TCL1BO95988 128 aa12.87□□□□□ -0.35
MCF2L-208ENST00000397030 TDRG1Q3Y452 100 aa12.87□□□□□ -0.35
MCF2L-208ENST00000397030 PCNX2A6NKB5 2137 aa12.87□□□□□ -0.35
MCF2L-208ENST00000397030 CDSNQ15517 529 aa12.86□□□□□ -0.35
MCF2L-208ENST00000397030 COL4A4P53420 1690 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-208ENST00000397030 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
MCF2L-208ENST00000397030 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
MCF2L-208ENST00000397030 PRR15LQ9BU68 103 aa12.86□□□□□ -0.35
MCF2L-208ENST00000397030 LINC01556Q5JQF7 62 aa12.85□□□□□ -0.35
MCF2L-208ENST00000397030 TEN1Q86WV5 123 aa12.85□□□□□ -0.35
MCF2L-208ENST00000397030 C1orf137Q5JT78 98 aa12.85□□□□□ -0.35
MCF2L-208ENST00000397030 M0R378 163 aa12.85□□□□□ -0.35
MCF2L-208ENST00000397030 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
MCF2L-208ENST00000397030 C10orf25Q5T742 122 aa12.84□□□□□ -0.35
MCF2L-208ENST00000397030 CD164L2Q6UWJ8 174 aa12.84□□□□□ -0.35
MCF2L-208ENST00000397030 IBA57-AS1B1ANH7 110 aa12.84□□□□□ -0.35
MCF2L-208ENST00000397030 DHRS4-AS1Q9P1J3 65 aa12.84□□□□□ -0.35
MCF2L-208ENST00000397030 TMEM223A0PJW6 202 aa12.83□□□□□ -0.36
MCF2L-208ENST00000397030 RPL28P46779 137 aaKnown RBP12.83□□□□□ -0.36
MCF2L-208ENST00000397030 PRR4Q16378 134 aa12.83□□□□□ -0.36
MCF2L-208ENST00000397030 TAX1BP3O14907 124 aa12.82□□□□□ -0.36
MCF2L-208ENST00000397030 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
MCF2L-208ENST00000397030 LINC00959A0A1B0GUT2 108 aa12.82□□□□□ -0.36
MCF2L-208ENST00000397030 M0QY20 66 aa12.82□□□□□ -0.36
MCF2L-208ENST00000397030 NCOA6Q14686 2063 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-208ENST00000397030 EDN2P20800 178 aa12.82□□□□□ -0.36
MCF2L-208ENST00000397030 Q6ZSR3 168 aa12.81□□□□□ -0.36
MCF2L-208ENST00000397030 FAM208BQ5VWN6 2430 aa12.81□□□□□ -0.36
MCF2L-208ENST00000397030 TECTAO75443 2155 aa12.81□□□□□ -0.36
MCF2L-208ENST00000397030 LINC00308Q8TCZ7 52 aa12.81□□□□□ -0.36
MCF2L-208ENST00000397030 OBSL1O75147 1896 aa12.81□□□□□ -0.36
MCF2L-208ENST00000397030 TRBV6-5A0A0K0K1A5 114 aa12.8□□□□□ -0.36
MCF2L-208ENST00000397030 FAM30AQ9NZY2 134 aa12.8□□□□□ -0.36
MCF2L-208ENST00000397030 PLXNB3Q9ULL4 1909 aa12.8□□□□□ -0.36
MCF2L-208ENST00000397030 H3BT86 120 aa12.8□□□□□ -0.36
MCF2L-208ENST00000397030 C6orf223Q8N319 242 aa12.8□□□□□ -0.36
MCF2L-208ENST00000397030 Q6ZTC4 211 aa12.8□□□□□ -0.36
MCF2L-208ENST00000397030 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-208ENST00000397030 PRYO14603 147 aa12.79□□□□□ -0.36
MCF2L-208ENST00000397030 AVPP01185 164 aa12.79□□□□□ -0.36
MCF2L-208ENST00000397030 HIGD1BQ9P298 99 aa12.78□□□□□ -0.36
MCF2L-208ENST00000397030 ESRGQ1W209 222 aa12.78□□□□□ -0.36
MCF2L-208ENST00000397030 MRGPRG-AS1Q2M3A8 158 aa12.77□□□□□ -0.36
MCF2L-208ENST00000397030 Q6Q795 121 aa12.77□□□□□ -0.36
MCF2L-208ENST00000397030 Q6ZQY7 126 aa12.77□□□□□ -0.36
MCF2L-208ENST00000397030 CACNA1HO95180 2353 aa12.77□□□□□ -0.37
MCF2L-208ENST00000397030 DSCAMO60469 2012 aa12.77□□□□□ -0.37
MCF2L-208ENST00000397030 C20orf197Q8N268 126 aa12.77□□□□□ -0.37
MCF2L-208ENST00000397030 NDUFA7O95182 113 aa12.77□□□□□ -0.37
MCF2L-208ENST00000397030 MED13LQ71F56 2210 aa12.76□□□□□ -0.37
MCF2L-208ENST00000397030 IGHV6-1A0A0B4J1U7 121 aa12.76□□□□□ -0.37
MCF2L-208ENST00000397030 RNASE8Q8TDE3 154 aaKnown RBP12.76□□□□□ -0.37
MCF2L-208ENST00000397030 OTOGLQ3ZCN5 2332 aa12.76□□□□□ -0.37
MCF2L-208ENST00000397030 DSCAML1Q8TD84 2053 aa12.76□□□□□ -0.37
MCF2L-208ENST00000397030 Q8N9L7 120 aa12.75□□□□□ -0.37
MCF2L-208ENST00000397030 G3V4G9 280 aa12.74□□□□□ -0.37
MCF2L-208ENST00000397030 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
MCF2L-208ENST00000397030 PRO3102Q9H379 93 aa12.74□□□□□ -0.37
MCF2L-208ENST00000397030 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
MCF2L-208ENST00000397030 POM121L12Q8N7R1 296 aa12.74□□□□□ -0.37
MCF2L-208ENST00000397030 SPINK1P00995 79 aa12.74□□□□□ -0.37
MCF2L-208ENST00000397030 IGLC6P0CF74 106 aa12.73□□□□□ -0.37
MCF2L-208ENST00000397030 CYSRT1A8MQ03 144 aa12.73□□□□□ -0.37
MCF2L-208ENST00000397030 J3KT08 172 aa12.73□□□□□ -0.37
MCF2L-208ENST00000397030 XGP55808 180 aa12.73□□□□□ -0.37
MCF2L-208ENST00000397030 EBI3Q14213 229 aa12.72□□□□□ -0.37
MCF2L-208ENST00000397030 SNURFQ9Y675 71 aa12.72□□□□□ -0.37
MCF2L-208ENST00000397030 PRR9Q5T870 116 aa12.72□□□□□ -0.37
MCF2L-208ENST00000397030 C9orf116Q5BN46 136 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-208ENST00000397030 TSHBP01222 138 aa12.71□□□□□ -0.37
MCF2L-208ENST00000397030 ZNF73O43830 326 aaPredicted RBP12.71□□□□□ -0.38
MCF2L-208ENST00000397030 SERP2Q8N6R1 65 aa12.7□□□□□ -0.38
MCF2L-208ENST00000397030 LINC00574Q9H8X3 128 aa12.7□□□□□ -0.38
MCF2L-208ENST00000397030 CRIP1P50238 77 aa12.7□□□□□ -0.38
MCF2L-208ENST00000397030 BRWD1-AS2P59051 145 aa12.69□□□□□ -0.38
MCF2L-208ENST00000397030 LINC00643Q86TS7 51 aa12.69□□□□□ -0.38
MCF2L-208ENST00000397030 TRIAP1O43715 76 aa12.69□□□□□ -0.38
MCF2L-208ENST00000397030 IGLV1-40P01703 118 aa12.69□□□□□ -0.38
MCF2L-208ENST00000397030 ARHGAP21Q5T5U3 1957 aa12.68□□□□□ -0.38
MCF2L-208ENST00000397030 LST1O00453 97 aa12.67□□□□□ -0.38
MCF2L-208ENST00000397030 UNQ6190/PRO20217Q6UXQ8 127 aa12.67□□□□□ -0.38
MCF2L-208ENST00000397030 SMIM11BQ8TCY0 68 aa12.67□□□□□ -0.38
MCF2L-208ENST00000397030 MBD6Q96DN6 1003 aa12.67□□□□□ -0.38
MCF2L-208ENST00000397030 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
MCF2L-208ENST00000397030 NDUFV3P56181 108 aaKnown RBP12.66□□□□□ -0.38
MCF2L-208ENST00000397030 SHANK1Q9Y566 2161 aa12.66□□□□□ -0.38
MCF2L-208ENST00000397030 RNF185Q96GF1 192 aa12.65□□□□□ -0.38
MCF2L-208ENST00000397030 TANC2Q9HCD6 1990 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms