RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 SMKR1H3BMG3 65 aa11.37□□□□□ -0.59
CXCL12-204ENST00000395793 CCL25O15444 150 aa11.37□□□□□ -0.59
CXCL12-204ENST00000395793 XCL1P47992 114 aa11.37□□□□□ -0.59
CXCL12-204ENST00000395793 IGKV2-24A0A0C4DH68 120 aa11.36□□□□□ -0.59
CXCL12-204ENST00000395793 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
CXCL12-204ENST00000395793 PHOX2AO14813 284 aa11.36□□□□□ -0.59
CXCL12-204ENST00000395793 LINC00526Q96FQ7 95 aa11.36□□□□□ -0.59
CXCL12-204ENST00000395793 MRAP2Q96G30 205 aa11.36□□□□□ -0.59
CXCL12-204ENST00000395793 A0A096LNI7 61 aa11.35□□□□□ -0.59
CXCL12-204ENST00000395793 MRPL52Q86TS9 123 aaKnown RBP11.35□□□□□ -0.59
CXCL12-204ENST00000395793 NUP35Q8NFH5 326 aa11.35□□□□□ -0.59
CXCL12-204ENST00000395793 ISOC2Q96AB3 205 aa11.35□□□□□ -0.59
CXCL12-204ENST00000395793 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
CXCL12-204ENST00000395793 BTF3L4Q96K17 158 aa11.35□□□□□ -0.59
CXCL12-204ENST00000395793 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
CXCL12-204ENST00000395793 A0A1B0GVG6 124 aa11.34□□□□□ -0.59
CXCL12-204ENST00000395793 MAJINQ3KP22 176 aa11.34□□□□□ -0.59
CXCL12-204ENST00000395793 Q6ZRU5 148 aa11.34□□□□□ -0.59
CXCL12-204ENST00000395793 NRACQ8N912 160 aa11.34□□□□□ -0.59
CXCL12-204ENST00000395793 C7orf77A4D0Y5 90 aa11.33□□□□□ -0.6
CXCL12-204ENST00000395793 C9JQL5 133 aa11.33□□□□□ -0.6
CXCL12-204ENST00000395793 RPL23P62829 140 aaKnown RBP11.32□□□□□ -0.6
CXCL12-204ENST00000395793 IGHV1-58A0A0C4DH39 117 aa11.31□□□□□ -0.6
CXCL12-204ENST00000395793 RIGQ13278 110 aa11.31□□□□□ -0.6
CXCL12-204ENST00000395793 ZNF664Q8N3J9 261 aa11.31□□□□□ -0.6
CXCL12-204ENST00000395793 STPG4Q8N801 248 aa11.31□□□□□ -0.6
CXCL12-204ENST00000395793 PLA2G2DQ9UNK4 145 aa11.31□□□□□ -0.6
CXCL12-204ENST00000395793 SRSF3P84103 164 aaKnown RBP11.3□□□□□ -0.6
CXCL12-204ENST00000395793 SS18Q15532 418 aa11.3□□□□□ -0.6
CXCL12-204ENST00000395793 RNASE13Q5GAN3 156 aaKnown RBP11.3□□□□□ -0.6
CXCL12-204ENST00000395793 CD164L2Q6UWJ8 174 aa11.3□□□□□ -0.6
CXCL12-204ENST00000395793 SUMO2P61956 95 aaKnown RBP11.29□□□□□ -0.6
CXCL12-204ENST00000395793 TMEM241Q24JQ0 296 aa11.29□□□□□ -0.6
CXCL12-204ENST00000395793 MRPL51Q4U2R6 128 aaKnown RBP11.29□□□□□ -0.6
CXCL12-204ENST00000395793 C7orf33Q8WU49 177 aa11.29□□□□□ -0.6
CXCL12-204ENST00000395793 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
CXCL12-204ENST00000395793 UBE2D4Q9Y2X8 147 aa11.29□□□□□ -0.6
CXCL12-204ENST00000395793 VCYO14598 125 aa11.28□□□□□ -0.6
CXCL12-204ENST00000395793 FCER1GP30273 86 aa11.28□□□□□ -0.6
CXCL12-204ENST00000395793 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
CXCL12-204ENST00000395793 ADIRFQ15847 76 aa11.28□□□□□ -0.6
CXCL12-204ENST00000395793 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
CXCL12-204ENST00000395793 NAT8BQ9UHF3 227 aa11.28□□□□□ -0.6
CXCL12-204ENST00000395793 SMIM27A0A1W2PRY6 76 aa11.27□□□□□ -0.61
CXCL12-204ENST00000395793 FAM74A3Q4VXF1 159 aa11.27□□□□□ -0.61
CXCL12-204ENST00000395793 Q6ZUT4 128 aa11.26□□□□□ -0.61
CXCL12-204ENST00000395793 NAT8Q9UHE5 227 aa11.26□□□□□ -0.61
CXCL12-204ENST00000395793 CSDC2Q9Y534 153 aaKnown RBP11.26□□□□□ -0.61
CXCL12-204ENST00000395793 CAMPP49913 170 aa11.25□□□□□ -0.61
CXCL12-204ENST00000395793 SYCNQ0VAF6 134 aa11.25□□□□□ -0.61
CXCL12-204ENST00000395793 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
CXCL12-204ENST00000395793 ZNF561-AS1K7EIQ3 104 aa11.24□□□□□ -0.61
CXCL12-204ENST00000395793 PPP1R17O96001 155 aa11.24□□□□□ -0.61
CXCL12-204ENST00000395793 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
CXCL12-204ENST00000395793 KIR2DL4Q99706 377 aa11.23□□□□□ -0.61
CXCL12-204ENST00000395793 TNXBP22105 4242 aa11.23□□□□□ -0.61
CXCL12-204ENST00000395793 TRAV13-1A0A0B4J241 112 aa11.22□□□□□ -0.61
CXCL12-204ENST00000395793 C1orf196B1AJZ1 125 aa11.22□□□□□ -0.61
CXCL12-204ENST00000395793 COX7A2LO14548 114 aa11.22□□□□□ -0.61
CXCL12-204ENST00000395793 PPP1R2P9O14990 202 aa11.22□□□□□ -0.61
CXCL12-204ENST00000395793 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
CXCL12-204ENST00000395793 TRBV24-1A0A075B6N3 115 aa11.21□□□□□ -0.61
CXCL12-204ENST00000395793 PTTG1IPP53801 180 aa11.21□□□□□ -0.61
CXCL12-204ENST00000395793 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
CXCL12-204ENST00000395793 RPL32P62910 135 aaKnown RBP11.21□□□□□ -0.61
CXCL12-204ENST00000395793 C5orf38Q86SI9 138 aa11.21□□□□□ -0.61
CXCL12-204ENST00000395793 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
CXCL12-204ENST00000395793 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.61
CXCL12-204ENST00000395793 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
CXCL12-204ENST00000395793 LINC00862A6NCI5 91 aa11.2□□□□□ -0.62
CXCL12-204ENST00000395793 TNFRSF6BO95407 300 aa11.2□□□□□ -0.62
CXCL12-204ENST00000395793 MALP21145 153 aa11.2□□□□□ -0.62
CXCL12-204ENST00000395793 CKS2P33552 79 aa11.2□□□□□ -0.62
CXCL12-204ENST00000395793 ODF1Q14990 250 aa11.2□□□□□ -0.62
CXCL12-204ENST00000395793 MRPL54Q6P161 138 aaKnown RBP11.2□□□□□ -0.62
CXCL12-204ENST00000395793 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
CXCL12-204ENST00000395793 D6R8Y8 96 aa11.19□□□□□ -0.62
CXCL12-204ENST00000395793 NPYP01303 97 aa11.19□□□□□ -0.62
CXCL12-204ENST00000395793 PEA15Q15121 130 aa11.19□□□□□ -0.62
CXCL12-204ENST00000395793 SMIM2Q9BVW6 85 aa11.19□□□□□ -0.62
CXCL12-204ENST00000395793 LOC107984640A0A0U1RRK4 108 aa11.18□□□□□ -0.62
CXCL12-204ENST00000395793 A0A1B0GW15 77 aa11.18□□□□□ -0.62
CXCL12-204ENST00000395793 A0A1W2PNN7 141 aa11.18□□□□□ -0.62
CXCL12-204ENST00000395793 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
CXCL12-204ENST00000395793 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
CXCL12-204ENST00000395793 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
CXCL12-204ENST00000395793 OPRPNQ99935 248 aaPredicted RBP11.18□□□□□ -0.62
CXCL12-204ENST00000395793 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.17□□□□□ -0.62
CXCL12-204ENST00000395793 HBBP68871 147 aa11.17□□□□□ -0.62
CXCL12-204ENST00000395793 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
CXCL12-204ENST00000395793 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
CXCL12-204ENST00000395793 UBR4Q5T4S7 5183 aa11.17□□□□□ -0.62
CXCL12-204ENST00000395793 TMEM18Q96B42 140 aa11.16□□□□□ -0.62
CXCL12-204ENST00000395793 SMDT1Q9H4I9 107 aa11.16□□□□□ -0.62
CXCL12-204ENST00000395793 A0A0J9YXV3 536 aa11.15□□□□□ -0.62
CXCL12-204ENST00000395793 TCAPO15273 167 aa11.15□□□□□ -0.62
CXCL12-204ENST00000395793 APOMO95445 188 aa11.15□□□□□ -0.62
CXCL12-204ENST00000395793 SPAG11BQ08648 103 aa11.15□□□□□ -0.62
CXCL12-204ENST00000395793 SRSF9Q13242 221 aaKnown RBP eCLIP11.15□□□□□ -0.62
CXCL12-204ENST00000395793 IGHV3OR16-9A0A0B4J2B5 98 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms