RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 VCYO14598 125 aa7.32□□□□□ -1.24
PSEN1-204ENST00000394164 HOXD3P31249 432 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-204ENST00000394164 TMEM141Q96I45 108 aa7.32□□□□□ -1.24
PSEN1-204ENST00000394164 C5orf47Q569G3 176 aa7.32□□□□□ -1.24
PSEN1-204ENST00000394164 POM121L12Q8N7R1 296 aa7.32□□□□□ -1.24
PSEN1-204ENST00000394164 HECTD1Q9ULT8 2610 aa7.32□□□□□ -1.24
PSEN1-204ENST00000394164 A0A1W2PRX2 142 aa7.31□□□□□ -1.24
PSEN1-204ENST00000394164 H3BUA1 57 aa7.31□□□□□ -1.24
PSEN1-204ENST00000394164 IGHV3-30-3P0DP02 117 aa7.31□□□□□ -1.24
PSEN1-204ENST00000394164 Q96MF0 132 aa7.31□□□□□ -1.24
PSEN1-204ENST00000394164 TRBV7-7A0A0K0K1E9 115 aa7.31□□□□□ -1.24
PSEN1-204ENST00000394164 POLR2KP53803 58 aaKnown RBP7.31□□□□□ -1.24
PSEN1-204ENST00000394164 NSUN5P1Q3KNT7 163 aa7.31□□□□□ -1.24
PSEN1-204ENST00000394164 hADV29S1A0JD25 119 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 TIMM17AQ99595 171 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 H3BT86 120 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 LINC00315P59091 139 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 SNRPD3P62318 126 aaKnown RBP7.3□□□□□ -1.24
PSEN1-204ENST00000394164 ZNF843Q8N446 348 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 LENEPQ9Y5L5 61 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 FASNP49327 2511 aaKnown RBP7.3□□□□□ -1.24
PSEN1-204ENST00000394164 FN1P02751 2386 aaKnown RBP7.3□□□□□ -1.24
PSEN1-204ENST00000394164 IGHV4-31P0DP07 118 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-204ENST00000394164 CYSTM1Q9H1C7 97 aa7.3□□□□□ -1.24
PSEN1-204ENST00000394164 CR1P17927 2039 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 LST1O00453 97 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 RHOHQ15669 191 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 KIR2DL5BQ8NHK3 375 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 A0A096LNT2 108 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 TRAV13-1A0A0B4J241 112 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 GAGE2AQ6NT46 116 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 FAM19A4Q96LR4 140 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 ZNF702PQ9H963 129 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 NDUFA12Q9UI09 145 aa7.29□□□□□ -1.24
PSEN1-204ENST00000394164 J3KT08 172 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 PPP1R17O96001 155 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 DSCR9P59020 149 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 DEFB131AP59861 70 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 LITAFQ99732 161 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 SPANXA1Q9NS26 97 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 KIF25-AS1Q9Y6Z4 181 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 HIVEP2P31629 2446 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 A0A0J9YX75 114 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 KLLNB2CW77 178 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 APRG1Q8IVJ8 170 aa7.28□□□□□ -1.24
PSEN1-204ENST00000394164 SETXQ7Z333 2677 aaKnown RBP7.28□□□□□ -1.24
PSEN1-204ENST00000394164 UQCRQO14949 82 aa7.27□□□□□ -1.24
PSEN1-204ENST00000394164 CD28P10747 220 aa7.27□□□□□ -1.25
PSEN1-204ENST00000394164 PROK1P58294 105 aa7.27□□□□□ -1.25
PSEN1-204ENST00000394164 IGLV4-3A0A075B6K6 122 aa7.27□□□□□ -1.25
PSEN1-204ENST00000394164 IGHV3OR16-12A0A075B7B8 117 aa7.27□□□□□ -1.25
PSEN1-204ENST00000394164 K7EMT4 169 aa7.27□□□□□ -1.25
PSEN1-204ENST00000394164 NXPH4O95158 308 aa7.27□□□□□ -1.25
PSEN1-204ENST00000394164 FAM240AA0A1B0GVK7 77 aa7.26□□□□□ -1.25
PSEN1-204ENST00000394164 K7EQG2 157 aa7.26□□□□□ -1.25
PSEN1-204ENST00000394164 Q6YL49 198 aa7.26□□□□□ -1.25
PSEN1-204ENST00000394164 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
PSEN1-204ENST00000394164 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
PSEN1-204ENST00000394164 DAZ4Q86SG3 579 aaKnown RBP7.26□□□□□ -1.25
PSEN1-204ENST00000394164 WFDC11Q8NEX6 87 aa7.26□□□□□ -1.25
PSEN1-204ENST00000394164 LINC00526Q96FQ7 95 aa7.26□□□□□ -1.25
PSEN1-204ENST00000394164 DAZ3Q9NR90 486 aaKnown RBP7.26□□□□□ -1.25
PSEN1-204ENST00000394164 Q9UF83 564 aa7.26□□□□□ -1.25
PSEN1-204ENST00000394164 IGHV3-16A0A0C4DH30 117 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 RBMY1A1P0DJD3 496 aaKnown RBP7.25□□□□□ -1.25
PSEN1-204ENST00000394164 RBMY1CP0DJD4 496 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 RBMY1FQ15415 496 aaKnown RBP7.25□□□□□ -1.25
PSEN1-204ENST00000394164 DEFB113Q30KQ7 82 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 TMEM61Q8N0U2 210 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 DSCR8Q96T75 97 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 IGKV3D-7A0A0C4DH55 119 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 MIAQ16674 131 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 NBEAL2Q6ZNJ1 2754 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 IGHV1OR15-1A0A075B7D0 117 aa7.25□□□□□ -1.25
PSEN1-204ENST00000394164 TRBV27A0A0K0K1C4 114 aa7.24□□□□□ -1.25
PSEN1-204ENST00000394164 C4orf26Q17RF5 130 aa7.24□□□□□ -1.25
PSEN1-204ENST00000394164 Q9HAA7 133 aa7.24□□□□□ -1.25
PSEN1-204ENST00000394164 LINC00643Q86TS7 51 aa7.24□□□□□ -1.25
PSEN1-204ENST00000394164 C20orf203Q8NBC4 194 aa7.24□□□□□ -1.25
PSEN1-204ENST00000394164 COX7CP15954 63 aa7.23□□□□□ -1.25
PSEN1-204ENST00000394164 Q8N2B8 174 aa7.23□□□□□ -1.25
PSEN1-204ENST00000394164 RNF152Q8N8N0 203 aa7.23□□□□□ -1.25
PSEN1-204ENST00000394164 UBE2E2Q96LR5 201 aa7.23□□□□□ -1.25
PSEN1-204ENST00000394164 A0A087WVE0 104 aa7.23□□□□□ -1.25
PSEN1-204ENST00000394164 DEFB121Q5J5C9 76 aa7.23□□□□□ -1.25
PSEN1-204ENST00000394164 HRCT1Q6UXD1 115 aa7.23□□□□□ -1.25
PSEN1-204ENST00000394164 J3QLI3 93 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 M0QY20 66 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 BAALC-AS2P0C853 105 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 LRRC75A-AS1Q8N1F1 130 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 DYNLRB2Q8TF09 96 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 CITED2Q99967 270 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-204ENST00000394164 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
PSEN1-204ENST00000394164 UNC79Q9P2D8 2635 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 TIRAPP58753 221 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 OR13C6PQ8NH95 151 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 IGHV3-38A0A0C4DH36 116 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 IGHV1-58A0A0C4DH39 117 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms