RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 CCDC168Q8NDH2 2452 aa13.07□□□□□ -0.32
ERCC2-201ENST00000391941 HERV-K104P63124 156 aa13.07□□□□□ -0.32
ERCC2-201ENST00000391941 UBE2D4Q9Y2X8 147 aa13.07□□□□□ -0.32
ERCC2-201ENST00000391941 SETXQ7Z333 2677 aaKnown RBP13.07□□□□□ -0.32
ERCC2-201ENST00000391941 IGHV3-53P01767 116 aa13.06□□□□□ -0.32
ERCC2-201ENST00000391941 MIAQ16674 131 aa13.05□□□□□ -0.32
ERCC2-201ENST00000391941 KHDC1LQ5JSQ8 128 aa13.05□□□□□ -0.32
ERCC2-201ENST00000391941 Q8N2B8 174 aa13.05□□□□□ -0.32
ERCC2-201ENST00000391941 GAGE5Q13069 117 aa13.05□□□□□ -0.32
ERCC2-201ENST00000391941 GAGE6Q13070 117 aa13.05□□□□□ -0.32
ERCC2-201ENST00000391941 NBEAL2Q6ZNJ1 2754 aa13.04□□□□□ -0.32
ERCC2-201ENST00000391941 PIEZO1Q92508 2521 aa13.04□□□□□ -0.32
ERCC2-201ENST00000391941 TMEM61Q8N0U2 210 aa13.04□□□□□ -0.32
ERCC2-201ENST00000391941 LINC00694P0DN24 101 aa13.03□□□□□ -0.32
ERCC2-201ENST00000391941 CHCHD5Q9BSY4 110 aa13.03□□□□□ -0.32
ERCC2-201ENST00000391941 SPANXDQ9BXN6 97 aa13.03□□□□□ -0.32
ERCC2-201ENST00000391941 SPANXCQ9NY87 97 aa13.03□□□□□ -0.32
ERCC2-201ENST00000391941 TRAV13-1A0A0B4J241 112 aa13.03□□□□□ -0.32
ERCC2-201ENST00000391941 CITED2Q99967 270 aaPredicted RBP13.03□□□□□ -0.32
ERCC2-201ENST00000391941 IFITM1P13164 125 aa13.03□□□□□ -0.32
ERCC2-201ENST00000391941 TMEM101Q96IK0 257 aa13.03□□□□□ -0.32
ERCC2-201ENST00000391941 LINC01587Q99440 93 aa13.03□□□□□ -0.32
ERCC2-201ENST00000391941 TINCRA0A1B0GVN0 87 aa13.02□□□□□ -0.33
ERCC2-201ENST00000391941 C11orf44Q8N8P7 122 aa13.02□□□□□ -0.33
ERCC2-201ENST00000391941 Q9H8V8 135 aa13.02□□□□□ -0.33
ERCC2-201ENST00000391941 UBE2E2Q96LR5 201 aa13.02□□□□□ -0.33
ERCC2-201ENST00000391941 XCL2Q9UBD3 114 aa13.01□□□□□ -0.33
ERCC2-201ENST00000391941 B4DSR2 109 aa13.01□□□□□ -0.33
ERCC2-201ENST00000391941 EDA2RQ9HAV5 297 aa13.01□□□□□ -0.33
ERCC2-201ENST00000391941 LINC01600Q96MT4 127 aa13□□□□□ -0.33
ERCC2-201ENST00000391941 DGAT2L7PQ6IED9 249 aa13□□□□□ -0.33
ERCC2-201ENST00000391941 SOSTDC1Q6X4U4 206 aa13□□□□□ -0.33
ERCC2-201ENST00000391941 COX6CP09669 75 aa12.99□□□□□ -0.33
ERCC2-201ENST00000391941 RNF152Q8N8N0 203 aa12.99□□□□□ -0.33
ERCC2-201ENST00000391941 FN1P02751 2386 aaKnown RBP12.99□□□□□ -0.33
ERCC2-201ENST00000391941 SPANXA1Q9NS26 97 aa12.99□□□□□ -0.33
ERCC2-201ENST00000391941 LST1O00453 97 aa12.98□□□□□ -0.33
ERCC2-201ENST00000391941 PIK3CD-AS1Q5SR53 167 aa12.98□□□□□ -0.33
ERCC2-201ENST00000391941 IGKV3OR2-268A0A0C4DH90 116 aa12.97□□□□□ -0.33
ERCC2-201ENST00000391941 GAGE12JA6NER3 117 aa12.97□□□□□ -0.33
ERCC2-201ENST00000391941 GAGE7O76087 117 aa12.97□□□□□ -0.33
ERCC2-201ENST00000391941 GAGE12FP0CL80 117 aa12.97□□□□□ -0.33
ERCC2-201ENST00000391941 GAGE12GP0CL81 117 aa12.97□□□□□ -0.33
ERCC2-201ENST00000391941 GAGE12IP0CL82 117 aa12.97□□□□□ -0.33
ERCC2-201ENST00000391941 GAGE4Q13068 117 aa12.97□□□□□ -0.33
ERCC2-201ENST00000391941 ZNF462Q96JM2 2506 aa12.96□□□□□ -0.33
ERCC2-201ENST00000391941 TMEM89A2RUT3 159 aa12.95□□□□□ -0.34
ERCC2-201ENST00000391941 H3BT86 120 aa12.95□□□□□ -0.34
ERCC2-201ENST00000391941 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
ERCC2-201ENST00000391941 SMIM20Q8N5G0 67 aa12.95□□□□□ -0.34
ERCC2-201ENST00000391941 RS1O15537 224 aa12.94□□□□□ -0.34
ERCC2-201ENST00000391941 ZNF415Q09FC8 603 aa12.94□□□□□ -0.34
ERCC2-201ENST00000391941 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
ERCC2-201ENST00000391941 Q9HAA7 133 aa12.94□□□□□ -0.34
ERCC2-201ENST00000391941 YAE1D1Q9NRH1 226 aa12.94□□□□□ -0.34
ERCC2-201ENST00000391941 TRGV1A0A0A0MS02 117 aa12.93□□□□□ -0.34
ERCC2-201ENST00000391941 MEIG1Q5JSS6 88 aa12.93□□□□□ -0.34
ERCC2-201ENST00000391941 C11orf72Q8NBR9 251 aa12.93□□□□□ -0.34
ERCC2-201ENST00000391941 SMCR5Q8TEV8 140 aa12.93□□□□□ -0.34
ERCC2-201ENST00000391941 FAM218AQ96MZ4 157 aa12.93□□□□□ -0.34
ERCC2-201ENST00000391941 PLA2G2AP14555 144 aa12.93□□□□□ -0.34
ERCC2-201ENST00000391941 ZNF702PQ9H963 129 aa12.92□□□□□ -0.34
ERCC2-201ENST00000391941 MTORP42345 2549 aa12.92□□□□□ -0.34
ERCC2-201ENST00000391941 FAM110AQ9BQ89 295 aa12.92□□□□□ -0.34
ERCC2-201ENST00000391941 A0A1W2PRX2 142 aa12.91□□□□□ -0.34
ERCC2-201ENST00000391941 NDUFA1O15239 70 aa12.91□□□□□ -0.34
ERCC2-201ENST00000391941 PRIMA1Q86XR5 153 aa12.91□□□□□ -0.34
ERCC2-201ENST00000391941 MAP6D1Q9H9H5 199 aa12.91□□□□□ -0.34
ERCC2-201ENST00000391941 Q6Q795 121 aa12.91□□□□□ -0.34
ERCC2-201ENST00000391941 GCN1Q92616 2671 aaKnown RBP12.91□□□□□ -0.34
ERCC2-201ENST00000391941 TIMM17BO60830 172 aa12.91□□□□□ -0.34
ERCC2-201ENST00000391941 NTM-AS1Q6ZSK4 140 aa12.9□□□□□ -0.34
ERCC2-201ENST00000391941 A8MTW9 85 aa12.89□□□□□ -0.35
ERCC2-201ENST00000391941 Q6ZTI0 123 aa12.89□□□□□ -0.35
ERCC2-201ENST00000391941 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
ERCC2-201ENST00000391941 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
ERCC2-201ENST00000391941 Q96MF0 132 aa12.89□□□□□ -0.35
ERCC2-201ENST00000391941 IGLV5-45A0A087WSX0 123 aa12.88□□□□□ -0.35
ERCC2-201ENST00000391941 FAM236AA0A1B0GUQ0 79 aa12.88□□□□□ -0.35
ERCC2-201ENST00000391941 FAM236BA0A1B0GV22 79 aa12.88□□□□□ -0.35
ERCC2-201ENST00000391941 SMIM1B2RUZ4 78 aa12.88□□□□□ -0.35
ERCC2-201ENST00000391941 TIRAPP58753 221 aa12.88□□□□□ -0.35
ERCC2-201ENST00000391941 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
ERCC2-201ENST00000391941 CIRBPQ14011 172 aaKnown RBP12.88□□□□□ -0.35
ERCC2-201ENST00000391941 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
ERCC2-201ENST00000391941 PRORYQ9H606 182 aa12.88□□□□□ -0.35
ERCC2-201ENST00000391941 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
ERCC2-201ENST00000391941 ACANP16112 2415 aa12.88□□□□□ -0.35
ERCC2-201ENST00000391941 LINC01356Q8N9X3 169 aa12.87□□□□□ -0.35
ERCC2-201ENST00000391941 TOMM7Q9P0U1 55 aa12.87□□□□□ -0.35
ERCC2-201ENST00000391941 DYNLRB2Q8TF09 96 aa12.87□□□□□ -0.35
ERCC2-201ENST00000391941 DNAJC30Q96LL9 226 aa12.87□□□□□ -0.35
ERCC2-201ENST00000391941 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
ERCC2-201ENST00000391941 C9orf129Q5T035 196 aaKnown RBP12.86□□□□□ -0.35
ERCC2-201ENST00000391941 WFDC10AQ9H1F0 79 aa12.86□□□□□ -0.35
ERCC2-201ENST00000391941 IGLV5-39A0A0G2JS06 123 aa12.85□□□□□ -0.35
ERCC2-201ENST00000391941 BEAN1Q3B7T3 259 aa12.85□□□□□ -0.35
ERCC2-201ENST00000391941 APCP25054 2843 aa12.84□□□□□ -0.35
ERCC2-201ENST00000391941 FAM240AA0A1B0GVK7 77 aa12.84□□□□□ -0.35
ERCC2-201ENST00000391941 C11orf68Q9H3H3 251 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms