RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 MAP1BP46821 2468 aaKnown RBP-0.73□□□□□ -2.53
SNORA40.2-201ENST00000390847 PI4KAP42356 2102 aa-0.74□□□□□ -2.53
SNORA40.2-201ENST00000390847 K7EQZ3 153 aa-0.74□□□□□ -2.53
SNORA40.2-201ENST00000390847 APOC3P02656 99 aa-0.74□□□□□ -2.53
SNORA40.2-201ENST00000390847 ARL11Q969Q4 196 aa-0.74□□□□□ -2.53
SNORA40.2-201ENST00000390847 SNRNP25Q9BV90 132 aaKnown RBP-0.74□□□□□ -2.53
SNORA40.2-201ENST00000390847 NDUFA4L2Q9NRX3 87 aa-0.74□□□□□ -2.53
SNORA40.2-201ENST00000390847 APC2O95996 2303 aa-0.75□□□□□ -2.53
SNORA40.2-201ENST00000390847 TNFP01375 233 aa-0.75□□□□□ -2.53
SNORA40.2-201ENST00000390847 SELENOWP63302 87 aa-0.75□□□□□ -2.53
SNORA40.2-201ENST00000390847 MEIG1Q5JSS6 88 aa-0.75□□□□□ -2.53
SNORA40.2-201ENST00000390847 NAA60Q9H7X0 242 aa-0.75□□□□□ -2.53
SNORA40.2-201ENST00000390847 LINC00472Q9H8W2 130 aa-0.75□□□□□ -2.53
SNORA40.2-201ENST00000390847 DYNLRB1Q9NP97 96 aa-0.75□□□□□ -2.53
SNORA40.2-201ENST00000390847 TPPP2P59282 170 aa-0.76□□□□□ -2.53
SNORA40.2-201ENST00000390847 MGST2Q99735 147 aa-0.76□□□□□ -2.53
SNORA40.2-201ENST00000390847 ZNF236Q9UL36 1845 aa-0.76□□□□□ -2.53
SNORA40.2-201ENST00000390847 GVINP1Q7Z2Y8 2422 aa-0.76□□□□□ -2.53
SNORA40.2-201ENST00000390847 ALMS1Q8TCU4 4167 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 UNC13AQ9UPW8 1703 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 TRBV7-3A0A075B6L6 115 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 GNG7O60262 68 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 TSLPQ969D9 159 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 PPP3R2Q96LZ3 170 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 LINC00470Q9BZP3 86 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 CSPG4Q6UVK1 2322 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 MUC2Q02817 5179 aa-0.77□□□□□ -2.53
SNORA40.2-201ENST00000390847 IGLC7A0M8Q6 106 aa-0.78□□□□□ -2.53
SNORA40.2-201ENST00000390847 TNXBP22105 4242 aa-0.78□□□□□ -2.54
SNORA40.2-201ENST00000390847 DOCK1Q14185 1865 aa-0.79□□□□□ -2.54
SNORA40.2-201ENST00000390847 MIF4GDA9UHW6 222 aaKnown RBP-0.79□□□□□ -2.54
SNORA40.2-201ENST00000390847 COX6B1P14854 86 aa-0.79□□□□□ -2.54
SNORA40.2-201ENST00000390847 CCDC58Q4VC31 144 aa-0.79□□□□□ -2.54
SNORA40.2-201ENST00000390847 MYO7BQ6PIF6 2116 aa-0.79□□□□□ -2.54
SNORA40.2-201ENST00000390847 TENM2Q9NT68 2774 aa-0.79□□□□□ -2.54
SNORA40.2-201ENST00000390847 SRRM2Q9UQ35 2752 aaKnown RBP-0.8□□□□□ -2.54
SNORA40.2-201ENST00000390847 LOC730098B7Z3J9 87 aa-0.8□□□□□ -2.54
SNORA40.2-201ENST00000390847 Q56UQ5 140 aa-0.8□□□□□ -2.54
SNORA40.2-201ENST00000390847 LINC01558Q9Y6Z2 57 aa-0.8□□□□□ -2.54
SNORA40.2-201ENST00000390847 HECTD4Q9Y4D8 3996 aa-0.81□□□□□ -2.54
SNORA40.2-201ENST00000390847 HMGN4O00479 90 aa-0.81□□□□□ -2.54
SNORA40.2-201ENST00000390847 PATJQ8NI35 1801 aa-0.81□□□□□ -2.54
SNORA40.2-201ENST00000390847 WDR7Q9Y4E6 1490 aa-0.81□□□□□ -2.54
SNORA40.2-201ENST00000390847 FAT2Q9NYQ8 4349 aa-0.81□□□□□ -2.54
SNORA40.2-201ENST00000390847 PAPPAQ13219 1627 aa-0.82□□□□□ -2.54
SNORA40.2-201ENST00000390847 BICRAQ9NZM4 1560 aa-0.82□□□□□ -2.54
SNORA40.2-201ENST00000390847 SPRR1BP22528 89 aa-0.82□□□□□ -2.54
SNORA40.2-201ENST00000390847 SPANXDQ9BXN6 97 aa-0.82□□□□□ -2.54
SNORA40.2-201ENST00000390847 SPTA1P02549 2419 aa-0.82□□□□□ -2.54
SNORA40.2-201ENST00000390847 WNK1Q9H4A3 2382 aa-0.82□□□□□ -2.54
SNORA40.2-201ENST00000390847 ATRQ13535 2644 aa-0.83□□□□□ -2.54
SNORA40.2-201ENST00000390847 KIF21AQ7Z4S6 1674 aa-0.83□□□□□ -2.54
SNORA40.2-201ENST00000390847 LOC285095A0A1B0GVY8 99 aa-0.83□□□□□ -2.54
SNORA40.2-201ENST00000390847 CATR1Q13166 79 aa-0.83□□□□□ -2.54
SNORA40.2-201ENST00000390847 BSNQ9UPA5 3926 aa-0.84□□□□□ -2.54
SNORA40.2-201ENST00000390847 SHANK2Q9UPX8 1470 aa-0.84□□□□□ -2.54
SNORA40.2-201ENST00000390847 SFT2D2O95562 160 aa-0.84□□□□□ -2.54
SNORA40.2-201ENST00000390847 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.84□□□□□ -2.54
SNORA40.2-201ENST00000390847 CPSF1Q10570 1443 aaKnown RBP-0.84□□□□□ -2.54
SNORA40.2-201ENST00000390847 DOCK2Q92608 1830 aa-0.85□□□□□ -2.54
SNORA40.2-201ENST00000390847 NDUFA2O43678 99 aa-0.85□□□□□ -2.55
SNORA40.2-201ENST00000390847 APOC2P02655 101 aa-0.85□□□□□ -2.55
SNORA40.2-201ENST00000390847 NAIPQ13075 1403 aa-0.85□□□□□ -2.55
SNORA40.2-201ENST00000390847 MRPL54Q6P161 138 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.2-201ENST00000390847 C8orf59Q8N0T1 100 aaPredicted RBP-0.85□□□□□ -2.55
SNORA40.2-201ENST00000390847 FXYD6Q9H0Q3 95 aa-0.85□□□□□ -2.55
SNORA40.2-201ENST00000390847 GOLGA4Q13439 2230 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.2-201ENST00000390847 SBF2Q86WG5 1849 aa-0.86□□□□□ -2.55
SNORA40.2-201ENST00000390847 COL6A3P12111 3177 aa-0.86□□□□□ -2.55
SNORA40.2-201ENST00000390847 SSSCA1O60232 199 aa-0.86□□□□□ -2.55
SNORA40.2-201ENST00000390847 IFNGP01579 166 aa-0.86□□□□□ -2.55
SNORA40.2-201ENST00000390847 BTG2P78543 158 aa-0.86□□□□□ -2.55
SNORA40.2-201ENST00000390847 TSC22D3Q99576 134 aa-0.86□□□□□ -2.55
SNORA40.2-201ENST00000390847 ACANP16112 2415 aa-0.86□□□□□ -2.55
SNORA40.2-201ENST00000390847 POLA1P09884 1462 aaPredicted RBP-0.86□□□□□ -2.55
SNORA40.2-201ENST00000390847 SETXQ7Z333 2677 aaKnown RBP-0.87□□□□□ -2.55
SNORA40.2-201ENST00000390847 EP300Q09472 2414 aaPredicted RBP-0.87□□□□□ -2.55
SNORA40.2-201ENST00000390847 RIMS1Q86UR5 1692 aaKnown RBP-0.87□□□□□ -2.55
SNORA40.2-201ENST00000390847 CHKB-CPT1BH3BT56 60 aa-0.88□□□□□ -2.55
SNORA40.2-201ENST00000390847 MGPP08493 103 aa-0.88□□□□□ -2.55
SNORA40.2-201ENST00000390847 SPRR2BP35325 72 aa-0.88□□□□□ -2.55
SNORA40.2-201ENST00000390847 COMMD6Q7Z4G1 85 aa-0.88□□□□□ -2.55
SNORA40.2-201ENST00000390847 C5orf38Q86SI9 138 aa-0.88□□□□□ -2.55
SNORA40.2-201ENST00000390847 MYOZ3Q8TDC0 251 aa-0.88□□□□□ -2.55
SNORA40.2-201ENST00000390847 FAM107BQ9H098 131 aa-0.88□□□□□ -2.55
SNORA40.2-201ENST00000390847 CHD8Q9HCK8 2581 aa-0.89□□□□□ -2.55
SNORA40.2-201ENST00000390847 FGF7P21781 194 aa-0.89□□□□□ -2.55
SNORA40.2-201ENST00000390847 DEFB123Q8N688 67 aa-0.89□□□□□ -2.55
SNORA40.2-201ENST00000390847 FAIMQ9NVQ4 179 aa-0.89□□□□□ -2.55
SNORA40.2-201ENST00000390847 SPINK4O60575 86 aa-0.9□□□□□ -2.55
SNORA40.2-201ENST00000390847 KRTAP19-7Q3SYF9 63 aa-0.9□□□□□ -2.55
SNORA40.2-201ENST00000390847 MBD5Q9P267 1494 aa-0.91□□□□□ -2.55
SNORA40.2-201ENST00000390847 FLNBO75369 2602 aaKnown RBP-0.91□□□□□ -2.55
SNORA40.2-201ENST00000390847 LOC100130705A0A1B0GUX0 176 aa-0.91□□□□□ -2.56
SNORA40.2-201ENST00000390847 TMEM263Q8WUH6 116 aaKnown RBP-0.91□□□□□ -2.56
SNORA40.2-201ENST00000390847 NXT2Q9NPJ8 142 aaKnown RBP-0.91□□□□□ -2.56
SNORA40.2-201ENST00000390847 LINC00474Q9P2X8 69 aa-0.91□□□□□ -2.56
SNORA40.2-201ENST00000390847 UQCR10Q9UDW1 63 aa-0.91□□□□□ -2.56
SNORA40.2-201ENST00000390847 TSC2P49815 1807 aa-0.92□□□□□ -2.56
SNORA40.2-201ENST00000390847 ARHGEF12Q9NZN5 1544 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms