RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 ARPC5O15511 151 aa12.88□□□□□ -0.35
CNEP1R1-201ENST00000389134 H2AFB1P0C5Y9 115 aa12.88□□□□□ -0.35
CNEP1R1-201ENST00000389134 MALP21145 153 aa12.88□□□□□ -0.35
CNEP1R1-201ENST00000389134 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
CNEP1R1-201ENST00000389134 BIN3Q9NQY0 253 aa12.88□□□□□ -0.35
CNEP1R1-201ENST00000389134 PMCHP20382 165 aa12.87□□□□□ -0.35
CNEP1R1-201ENST00000389134 GNG4P50150 75 aa12.87□□□□□ -0.35
CNEP1R1-201ENST00000389134 CCL20P78556 96 aa12.87□□□□□ -0.35
CNEP1R1-201ENST00000389134 RPL18AQ02543 176 aaKnown RBP12.87□□□□□ -0.35
CNEP1R1-201ENST00000389134 TSKUQ8WUA8 353 aa12.87□□□□□ -0.35
CNEP1R1-201ENST00000389134 CDC42SE2Q9NRR3 84 aa12.87□□□□□ -0.35
CNEP1R1-201ENST00000389134 ESDP10768 282 aa12.86□□□□□ -0.35
CNEP1R1-201ENST00000389134 C2orf48Q96LS8 159 aa12.86□□□□□ -0.35
CNEP1R1-201ENST00000389134 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
CNEP1R1-201ENST00000389134 A0A087WZ39 114 aa12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 TRAV1-1A0A0B4J248 108 aa12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 RAB19A4D1S5 217 aa12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 G3V3Q6 166 aa12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 COX7A2LO14548 114 aa12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 SMIM15Q7Z3B0 74 aa12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 MRPL52Q86TS9 123 aaKnown RBP12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 MRAP2Q96G30 205 aa12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 FAM210AQ96ND0 272 aa12.85□□□□□ -0.35
CNEP1R1-201ENST00000389134 KRTAP1-4P0C5Y4 121 aa12.84□□□□□ -0.35
CNEP1R1-201ENST00000389134 RPL13AP40429 203 aaKnown RBP12.84□□□□□ -0.35
CNEP1R1-201ENST00000389134 UBE2D1P51668 147 aa12.84□□□□□ -0.35
CNEP1R1-201ENST00000389134 GNG13Q9P2W3 67 aa12.84□□□□□ -0.35
CNEP1R1-201ENST00000389134 C1orf196B1AJZ1 125 aa12.83□□□□□ -0.36
CNEP1R1-201ENST00000389134 BCL2L11O43521 198 aa12.83□□□□□ -0.36
CNEP1R1-201ENST00000389134 RNF151Q2KHN1 245 aa12.83□□□□□ -0.36
CNEP1R1-201ENST00000389134 NUDT10Q8NFP7 164 aa12.82□□□□□ -0.36
CNEP1R1-201ENST00000389134 NUDT11Q96G61 164 aa12.82□□□□□ -0.36
CNEP1R1-201ENST00000389134 TRBV6-5A0A0K0K1A5 114 aa12.81□□□□□ -0.36
CNEP1R1-201ENST00000389134 TSHBP01222 138 aa12.81□□□□□ -0.36
CNEP1R1-201ENST00000389134 OPRPNQ99935 248 aaPredicted RBP12.81□□□□□ -0.36
CNEP1R1-201ENST00000389134 FOXA3P55318 350 aaPredicted RBP12.79□□□□□ -0.36
CNEP1R1-201ENST00000389134 TRBV20OR9-2A0A075B6H5 130 aa12.78□□□□□ -0.36
CNEP1R1-201ENST00000389134 KRTAP11-1Q8IUC1 163 aa12.78□□□□□ -0.36
CNEP1R1-201ENST00000389134 RPP21Q9H633 154 aaKnown RBP12.78□□□□□ -0.36
CNEP1R1-201ENST00000389134 ST20Q9HBF5 79 aa12.78□□□□□ -0.36
CNEP1R1-201ENST00000389134 TMEM242Q9NWH2 141 aa12.78□□□□□ -0.36
CNEP1R1-201ENST00000389134 PDE6DO43924 150 aa12.77□□□□□ -0.37
CNEP1R1-201ENST00000389134 ZNF345Q14585 488 aa12.77□□□□□ -0.37
CNEP1R1-201ENST00000389134 C7orf77A4D0Y5 90 aa12.76□□□□□ -0.37
CNEP1R1-201ENST00000389134 IMMP2LQ96T52 175 aa12.76□□□□□ -0.37
CNEP1R1-201ENST00000389134 MED9Q9NWA0 146 aa12.76□□□□□ -0.37
CNEP1R1-201ENST00000389134 CARHSP1Q9Y2V2 147 aaKnown RBP12.76□□□□□ -0.37
CNEP1R1-201ENST00000389134 SPAG11BQ08648 103 aa12.75□□□□□ -0.37
CNEP1R1-201ENST00000389134 C5orf38Q86SI9 138 aa12.75□□□□□ -0.37
CNEP1R1-201ENST00000389134 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
CNEP1R1-201ENST00000389134 FAM168BA1KXE4 195 aa12.74□□□□□ -0.37
CNEP1R1-201ENST00000389134 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
CNEP1R1-201ENST00000389134 TRBV27A0A0K0K1C4 114 aa12.73□□□□□ -0.37
CNEP1R1-201ENST00000389134 F8WDY8 70 aa12.73□□□□□ -0.37
CNEP1R1-201ENST00000389134 POLR2KP53803 58 aaKnown RBP12.73□□□□□ -0.37
CNEP1R1-201ENST00000389134 SMAGPQ0VAQ4 97 aa12.73□□□□□ -0.37
CNEP1R1-201ENST00000389134 RNASE7Q9H1E1 156 aaKnown RBP12.73□□□□□ -0.37
CNEP1R1-201ENST00000389134 TRAV13-1A0A0B4J241 112 aa12.72□□□□□ -0.37
CNEP1R1-201ENST00000389134 TEX46H3BTG2 121 aa12.72□□□□□ -0.37
CNEP1R1-201ENST00000389134 OR10D4PQ8NGN7 298 aa12.72□□□□□ -0.37
CNEP1R1-201ENST00000389134 KANTRA0A1W2PQU2 76 aa12.71□□□□□ -0.37
CNEP1R1-201ENST00000389134 FAM19A5Q7Z5A7 132 aaPredicted RBP12.71□□□□□ -0.37
CNEP1R1-201ENST00000389134 TLX1NBP0CAT3 122 aa12.7□□□□□ -0.38
CNEP1R1-201ENST00000389134 SMLR1H3BR10 107 aa12.69□□□□□ -0.38
CNEP1R1-201ENST00000389134 TSPAN13O95857 204 aa12.69□□□□□ -0.38
CNEP1R1-201ENST00000389134 UBE2BP63146 152 aa12.69□□□□□ -0.38
CNEP1R1-201ENST00000389134 TMEM241Q24JQ0 296 aa12.69□□□□□ -0.38
CNEP1R1-201ENST00000389134 RNASE13Q5GAN3 156 aaKnown RBP12.69□□□□□ -0.38
CNEP1R1-201ENST00000389134 NDUFA1O15239 70 aa12.68□□□□□ -0.38
CNEP1R1-201ENST00000389134 UBE2D4Q9Y2X8 147 aa12.68□□□□□ -0.38
CNEP1R1-201ENST00000389134 K7EN84 100 aa12.67□□□□□ -0.38
CNEP1R1-201ENST00000389134 FCER1GP30273 86 aa12.67□□□□□ -0.38
CNEP1R1-201ENST00000389134 OCC1Q8TAD7 63 aa12.67□□□□□ -0.38
CNEP1R1-201ENST00000389134 HMSDA8MTL9 139 aa12.66□□□□□ -0.38
CNEP1R1-201ENST00000389134 VCYO14598 125 aa12.66□□□□□ -0.38
CNEP1R1-201ENST00000389134 ORAOV1Q8WV07 137 aa12.66□□□□□ -0.38
CNEP1R1-201ENST00000389134 M0QXV9 152 aa12.65□□□□□ -0.38
CNEP1R1-201ENST00000389134 GAGE2EQ4V326 116 aa12.65□□□□□ -0.38
CNEP1R1-201ENST00000389134 GAGE2DQ9UEU5 116 aa12.65□□□□□ -0.38
CNEP1R1-201ENST00000389134 A8MWL6 223 aa12.64□□□□□ -0.39
CNEP1R1-201ENST00000389134 C10orf25Q5T742 122 aa12.64□□□□□ -0.39
CNEP1R1-201ENST00000389134 KRTAP7-1Q8IUC3 87 aa12.64□□□□□ -0.39
CNEP1R1-201ENST00000389134 BORCS7Q96B45 105 aa12.64□□□□□ -0.39
CNEP1R1-201ENST00000389134 SMDT1Q9H4I9 107 aa12.64□□□□□ -0.39
CNEP1R1-201ENST00000389134 GATCO43716 136 aaKnown RBP12.63□□□□□ -0.39
CNEP1R1-201ENST00000389134 UNQ6190/PRO20217Q6UXQ8 127 aa12.63□□□□□ -0.39
CNEP1R1-201ENST00000389134 Q6ZUT4 128 aa12.63□□□□□ -0.39
CNEP1R1-201ENST00000389134 TMEM191AQ9H0A3 160 aa12.63□□□□□ -0.39
CNEP1R1-201ENST00000389134 ZNF861PO60384 105 aa12.62□□□□□ -0.39
CNEP1R1-201ENST00000389134 TIMM21Q9BVV7 248 aa12.62□□□□□ -0.39
CNEP1R1-201ENST00000389134 C6orf48Q9UBA6 75 aa12.62□□□□□ -0.39
CNEP1R1-201ENST00000389134 RAB4AP20338 218 aa12.61□□□□□ -0.39
CNEP1R1-201ENST00000389134 TMEM18Q96B42 140 aa12.61□□□□□ -0.39
CNEP1R1-201ENST00000389134 KIR2DL4Q99706 377 aa12.61□□□□□ -0.39
CNEP1R1-201ENST00000389134 IGHV3OR16-9A0A0B4J2B5 98 aa12.6□□□□□ -0.39
CNEP1R1-201ENST00000389134 PPP1R17O96001 155 aa12.59□□□□□ -0.39
CNEP1R1-201ENST00000389134 TAGLN2P37802 199 aaKnown RBP12.59□□□□□ -0.39
CNEP1R1-201ENST00000389134 FAM231DQ6ZW35 169 aa12.59□□□□□ -0.39
CNEP1R1-201ENST00000389134 CT83Q5H943 113 aa12.58□□□□□ -0.4
CNEP1R1-201ENST00000389134 MUC17Q685J3 4493 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms