RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 CDC42SE2Q9NRR3 84 aa0.65□□□□□ -2.31
RNU6-140P-201ENST00000384566 LINC01558Q9Y6Z2 57 aa0.65□□□□□ -2.31
RNU6-140P-201ENST00000384566 SHANK2Q9UPX8 1470 aa0.65□□□□□ -2.31
RNU6-140P-201ENST00000384566 KDM5AP29375 1690 aaKnown RBP0.65□□□□□ -2.31
RNU6-140P-201ENST00000384566 ABCC5O15440 1437 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 TOP2BQ02880 1626 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 SBF2Q86WG5 1849 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 TENM1Q9UKZ4 2725 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 SFT2D2O95562 160 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 COX6CP09669 75 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 PRO1854Q9UHT4 67 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 CCNB3Q8WWL7 1395 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 ASH1LQ9NR48 2969 aaKnown RBP0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 FCGBPQ9Y6R7 5405 aaPredicted RBP0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 EHBP1L1Q8N3D4 1523 aa0.64□□□□□ -2.31
RNU6-140P-201ENST00000384566 GAPVD1Q14C86 1478 aa0.63□□□□□ -2.31
RNU6-140P-201ENST00000384566 hADV29S1A0JD25 119 aa0.63□□□□□ -2.31
RNU6-140P-201ENST00000384566 M0R143 59 aa0.63□□□□□ -2.31
RNU6-140P-201ENST00000384566 AP4S1Q9Y587 144 aa0.63□□□□□ -2.31
RNU6-140P-201ENST00000384566 WNK3Q9BYP7 1800 aa0.63□□□□□ -2.31
RNU6-140P-201ENST00000384566 HMGXB3Q12766 1538 aa0.63□□□□□ -2.31
RNU6-140P-201ENST00000384566 KDM3BQ7LBC6 1761 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 FYCO1Q9BQS8 1478 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 TRAPPC2P0DI81 140 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 TRAPPC2BP0DI82 140 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 COX6A2Q02221 97 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 NCMAPQ5T1S8 102 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 LINC00472Q9H8W2 130 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 NXT2Q9NPJ8 142 aaKnown RBP0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 FAIMQ9NVQ4 179 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 RAPGEF6Q8TEU7 1601 aa0.62□□□□□ -2.31
RNU6-140P-201ENST00000384566 FBN3Q75N90 2809 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 TEX14Q8IWB6 1497 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 ZNF462Q96JM2 2506 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 GNGT2O14610 69 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 MPC2O95563 127 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 MGPP08493 103 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 SEC11AP67812 179 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 SSBP3-AS1Q7Z2R9 100 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 FAM223AQ8IWN6 122 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 ARL2-SNX15V9GYD0 113 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 ABCC10Q5T3U5 1492 aa0.61□□□□□ -2.31
RNU6-140P-201ENST00000384566 AKAP12Q02952 1782 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 PRDM15P57071 1507 aaPredicted RBP0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 FBN2P35556 2912 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 ZNF815PA8K554 130 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 NDUFC1O43677 76 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 MT-ATP8P03928 68 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 LINC00032P0C843 101 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 IGLC1P0CG04 106 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 HAMPP81172 84 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 DPY30Q9C005 99 aa0.6□□□□□ -2.31
RNU6-140P-201ENST00000384566 BTAF1O14981 1849 aa0.59□□□□□ -2.31
RNU6-140P-201ENST00000384566 PLXNB2O15031 1838 aa0.59□□□□□ -2.31
RNU6-140P-201ENST00000384566 SCN7AQ01118 1682 aa0.59□□□□□ -2.31
RNU6-140P-201ENST00000384566 ANKRD26Q9UPS8 1709 aa0.59□□□□□ -2.31
RNU6-140P-201ENST00000384566 NAV3Q8IVL0 2385 aa0.59□□□□□ -2.31
RNU6-140P-201ENST00000384566 SFTA2Q6UW10 78 aa0.59□□□□□ -2.31
RNU6-140P-201ENST00000384566 PMCHL2Q9BQD1 86 aa0.59□□□□□ -2.31
RNU6-140P-201ENST00000384566 LRP6O75581 1613 aa0.59□□□□□ -2.32
RNU6-140P-201ENST00000384566 A0A0D9SFI3 127 aa0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 ATOX1O00244 68 aa0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 SAA2P0DJI9 122 aaPredicted RBP0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 S100A3P33764 101 aa0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 PKIAP61925 76 aa0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 Q6JHZ5 121 aa0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 SPRR4Q96PI1 79 aa0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 CNFNQ9BYD5 112 aa0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 MAGI1Q96QZ7 1491 aaPredicted RBP0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 CADP27708 2225 aa0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 ZNF469Q96JG9 3925 aaPredicted RBP0.58□□□□□ -2.32
RNU6-140P-201ENST00000384566 ANKRD36BQ8N2N9 1353 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 NSD3Q9BZ95 1437 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 COL4A6Q14031 1691 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 JMJD1CQ15652 2540 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 MLH3Q9UHC1 1453 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 FRAS1Q86XX4 4008 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 FAM223BA6NKX1 122 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 COL5A1-AS1Q5SY13 56 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 MYO7AQ13402 2215 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 ERCC6L2Q5T890 1561 aa0.57□□□□□ -2.32
RNU6-140P-201ENST00000384566 ADGRL2O95490 1459 aa0.56□□□□□ -2.32
RNU6-140P-201ENST00000384566 NUP188Q5SRE5 1749 aa0.56□□□□□ -2.32
RNU6-140P-201ENST00000384566 M0R3E3 92 aa0.56□□□□□ -2.32
RNU6-140P-201ENST00000384566 PRH1P02810 166 aa0.56□□□□□ -2.32
RNU6-140P-201ENST00000384566 UBA52P62987 128 aaKnown RBP0.56□□□□□ -2.32
RNU6-140P-201ENST00000384566 TMEM263Q8WUH6 116 aaKnown RBP0.56□□□□□ -2.32
RNU6-140P-201ENST00000384566 SNHG12Q9BXW3 62 aa0.56□□□□□ -2.32
RNU6-140P-201ENST00000384566 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
RNU6-140P-201ENST00000384566 TROQ12816 1431 aaPredicted RBP0.55□□□□□ -2.32
RNU6-140P-201ENST00000384566 A0A0G2JND7 137 aa0.55□□□□□ -2.32
RNU6-140P-201ENST00000384566 A0A1B0GWA3 101 aa0.55□□□□□ -2.32
RNU6-140P-201ENST00000384566 C10orf142B7Z368 130 aa0.55□□□□□ -2.32
RNU6-140P-201ENST00000384566 SPINK6Q6UWN8 80 aa0.55□□□□□ -2.32
RNU6-140P-201ENST00000384566 VAMP8Q9BV40 100 aa0.55□□□□□ -2.32
RNU6-140P-201ENST00000384566 CACFD1Q9UGQ2 172 aa0.55□□□□□ -2.32
RNU6-140P-201ENST00000384566 LAMC1P11047 1609 aa0.55□□□□□ -2.32
RNU6-140P-201ENST00000384566 BCE1O60756 84 aa0.54□□□□□ -2.32
RNU6-140P-201ENST00000384566 TRGV9Q99603 122 aa0.54□□□□□ -2.32
RNU6-140P-201ENST00000384566 SMR3AQ99954 134 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms