RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 MROH2BQ7Z745 1585 aa-0.15□□□□□ -2.43
RNU6-39P-201ENST00000384344 USF3Q68DE3 2245 aa-0.15□□□□□ -2.43
RNU6-39P-201ENST00000384344 CCDC88BA6NC98 1476 aa-0.16□□□□□ -2.43
RNU6-39P-201ENST00000384344 MUC22E2RYF6 1773 aaPredicted RBP-0.16□□□□□ -2.43
RNU6-39P-201ENST00000384344 MYH2Q9UKX2 1941 aa-0.16□□□□□ -2.43
RNU6-39P-201ENST00000384344 IGHV1-24A0A0C4DH33 117 aa-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 CRYBA4P53673 196 aa-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 TMEM78Q5T7P6 136 aa-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 MED31Q9Y3C7 131 aa-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 CLIP1P30622 1438 aa-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 TIAM1Q13009 1591 aa-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 ESPL1Q14674 2120 aa-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 PARP4Q9UKK3 1724 aaKnown RBP-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 CCDC18Q5T9S5 1454 aa-0.16□□□□□ -2.44
RNU6-39P-201ENST00000384344 EFCAB5A4FU69 1503 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 USP54Q70EL1 1684 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 PNMA8CA0A1B0GUJ8 204 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 TMEM238C9JI98 176 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 F2Z2F3 143 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 ANK1P16157 1881 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 COX6A2Q02221 97 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 SUPT6HQ7KZ85 1726 aaKnown RBP-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 VPS25Q9BRG1 176 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 U3KQA8 63 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 LTN1O94822 1766 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 PTPN23Q9H3S7 1636 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 A2ML1A8K2U0 1454 aa-0.17□□□□□ -2.44
RNU6-39P-201ENST00000384344 ABCC3O15438 1527 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 TANC1Q9C0D5 1861 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 PLXNA1Q9UIW2 1896 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 TEX49A0A1B0GTD5 131 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 C9JAW5 83 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 HBDP02042 147 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 POLR2JP52435 117 aaKnown RBP-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 KRTAP19-2Q3LHN2 52 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 CDC26Q8NHZ8 85 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 THEM6Q8WUY1 208 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 TMEM141Q96I45 108 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 MYO3AQ8NEV4 1616 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 TRPM7Q96QT4 1865 aa-0.18□□□□□ -2.44
RNU6-39P-201ENST00000384344 SCRIBQ14160 1630 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 TRBV10-1A0A0K0K1A3 114 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 A0A1W2PRE2 83 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 MT2AP02795 61 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 HRCT1Q6UXD1 115 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 OR5A2Q8NGI9 324 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 PCBD2Q9H0N5 130 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 BET1LQ9NYM9 111 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 C5P01031 1676 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 ANKRD30AQ9BXX3 1397 aa-0.19□□□□□ -2.44
RNU6-39P-201ENST00000384344 NINQ8N4C6 2090 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 PTPRGP23470 1445 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 ANKRD50Q9ULJ7 1429 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 IFT140Q96RY7 1462 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 ARHGAP35Q9NRY4 1499 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 TRAV12-2A0A075B6T6 113 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 LOC107984640A0A0U1RRK4 108 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 UQCRQO14949 82 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 MT1FP04733 61 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 ADCYAP1P18509 176 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 RPL22P35268 128 aaKnown RBP-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 OR4S1Q8NGB4 309 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 OTOSQ8NHW6 89 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 BRK1Q8WUW1 75 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 NAT14Q8WUY8 206 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 CBLN4Q9NTU7 201 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 TRAPPC2LQ9UL33 140 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 DNAJC13O75165 2243 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 CLTCL1P53675 1640 aa-0.2□□□□□ -2.44
RNU6-39P-201ENST00000384344 FHAD1B1AJZ9 1412 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 TROQ12816 1431 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 LRRIQ1Q96JM4 1722 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 TOGARAM1Q9Y4F4 1720 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 RGPD3A6NKT7 1758 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 RGPD4Q7Z3J3 1758 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 C10orf142B7Z368 130 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 M0QZK8 103 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 POLR2HP52434 150 aaKnown RBP-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 PCBD1P61457 104 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 KRTAP6-2Q3LI66 62 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 OR9Q1Q8NGQ5 310 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 SAMD9LQ8IVG5 1584 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 ANKRD31Q8N7Z5 1873 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 NUP210Q8TEM1 1887 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 MROH1Q8NDA8 1641 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 CPDO75976 1380 aa-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 PRG4Q92954 1404 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-39P-201ENST00000384344 EIF4G3O43432 1585 aaKnown RBP-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 TANC2Q9HCD6 1990 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 DEPDC5O75140 1603 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 OR2H2O95918 312 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 PYYP10082 97 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 G0S2P27469 103 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 PSPHP78330 225 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 KRTAP19-8Q3LI54 63 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 KRTAP19-7Q3SYF9 63 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 PPDPFLQ8WWR9 84 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 BPESC1Q9GZL8 116 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 LMO7Q8WWI1 1683 aa-0.22□□□□□ -2.44
RNU6-39P-201ENST00000384344 MRC1P22897 1456 aa-0.22□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms