RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 LINC00526Q96FQ7 95 aa11.71□□□□□ -0.53
TMEM41A-202ENST00000382227 CARD19Q96LW7 228 aa11.71□□□□□ -0.53
TMEM41A-202ENST00000382227 TMEM242Q9NWH2 141 aa11.71□□□□□ -0.53
TMEM41A-202ENST00000382227 SS18Q15532 418 aa11.7□□□□□ -0.54
TMEM41A-202ENST00000382227 MRPL52Q86TS9 123 aaKnown RBP11.7□□□□□ -0.54
TMEM41A-202ENST00000382227 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
TMEM41A-202ENST00000382227 CEBPGP53567 150 aa11.69□□□□□ -0.54
TMEM41A-202ENST00000382227 POLR2KP53803 58 aaKnown RBP11.69□□□□□ -0.54
TMEM41A-202ENST00000382227 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
TMEM41A-202ENST00000382227 CD164L2Q6UWJ8 174 aa11.69□□□□□ -0.54
TMEM41A-202ENST00000382227 TMEM191AQ9H0A3 160 aa11.69□□□□□ -0.54
TMEM41A-202ENST00000382227 TRBV27A0A0K0K1C4 114 aa11.68□□□□□ -0.54
TMEM41A-202ENST00000382227 A0A1B0GUT8 65 aa11.68□□□□□ -0.54
TMEM41A-202ENST00000382227 ZNF561-AS1K7EIQ3 104 aa11.68□□□□□ -0.54
TMEM41A-202ENST00000382227 SYCNQ0VAF6 134 aa11.68□□□□□ -0.54
TMEM41A-202ENST00000382227 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
TMEM41A-202ENST00000382227 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
TMEM41A-202ENST00000382227 ALKAL2Q6UX46 152 aa11.67□□□□□ -0.54
TMEM41A-202ENST00000382227 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
TMEM41A-202ENST00000382227 TSKUQ8WUA8 353 aa11.67□□□□□ -0.54
TMEM41A-202ENST00000382227 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
TMEM41A-202ENST00000382227 C7orf77A4D0Y5 90 aa11.66□□□□□ -0.54
TMEM41A-202ENST00000382227 RAB4AP20338 218 aa11.66□□□□□ -0.54
TMEM41A-202ENST00000382227 REG3GQ6UW15 175 aa11.65□□□□□ -0.54
TMEM41A-202ENST00000382227 Q6ZRP5 223 aa11.65□□□□□ -0.54
TMEM41A-202ENST00000382227 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
TMEM41A-202ENST00000382227 AMN1Q8IY45 258 aa11.65□□□□□ -0.54
TMEM41A-202ENST00000382227 SMIM7Q9BQ49 75 aa11.65□□□□□ -0.54
TMEM41A-202ENST00000382227 CAMPP49913 170 aa11.64□□□□□ -0.55
TMEM41A-202ENST00000382227 ODF1Q14990 250 aa11.64□□□□□ -0.55
TMEM41A-202ENST00000382227 VCYO14598 125 aa11.63□□□□□ -0.55
TMEM41A-202ENST00000382227 PTTG1IPP53801 180 aa11.63□□□□□ -0.55
TMEM41A-202ENST00000382227 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMEM41A-202ENST00000382227 ISOC2Q96AB3 205 aa11.63□□□□□ -0.55
TMEM41A-202ENST00000382227 OSTCQ9NRP0 149 aa11.63□□□□□ -0.55
TMEM41A-202ENST00000382227 IGLV4-69A0A075B6H9 119 aa11.62□□□□□ -0.55
TMEM41A-202ENST00000382227 C1orf196B1AJZ1 125 aa11.62□□□□□ -0.55
TMEM41A-202ENST00000382227 MALP21145 153 aa11.62□□□□□ -0.55
TMEM41A-202ENST00000382227 FCER1GP30273 86 aa11.62□□□□□ -0.55
TMEM41A-202ENST00000382227 KRTAP10-8P60410 259 aa11.62□□□□□ -0.55
TMEM41A-202ENST00000382227 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
TMEM41A-202ENST00000382227 CSDC2Q9Y534 153 aaKnown RBP11.62□□□□□ -0.55
TMEM41A-202ENST00000382227 LOC107984640A0A0U1RRK4 108 aa11.61□□□□□ -0.55
TMEM41A-202ENST00000382227 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
TMEM41A-202ENST00000382227 COX7A2LO14548 114 aa11.61□□□□□ -0.55
TMEM41A-202ENST00000382227 GAGE2BQ13066 116 aa11.61□□□□□ -0.55
TMEM41A-202ENST00000382227 ZNF727A8MUV8 499 aa11.6□□□□□ -0.55
TMEM41A-202ENST00000382227 PPP1R17O96001 155 aa11.6□□□□□ -0.55
TMEM41A-202ENST00000382227 SUMO2P61956 95 aaKnown RBP11.6□□□□□ -0.55
TMEM41A-202ENST00000382227 SMAGPQ0VAQ4 97 aa11.6□□□□□ -0.55
TMEM41A-202ENST00000382227 AKAP14Q86UN6 197 aa11.6□□□□□ -0.55
TMEM41A-202ENST00000382227 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
TMEM41A-202ENST00000382227 RIGQ13278 110 aa11.59□□□□□ -0.55
TMEM41A-202ENST00000382227 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
TMEM41A-202ENST00000382227 NRACQ8N912 160 aa11.59□□□□□ -0.55
TMEM41A-202ENST00000382227 NUP35Q8NFH5 326 aa11.59□□□□□ -0.55
TMEM41A-202ENST00000382227 CAMK2N2Q96S95 79 aa11.59□□□□□ -0.55
TMEM41A-202ENST00000382227 KIR2DL4Q99706 377 aa11.58□□□□□ -0.56
TMEM41A-202ENST00000382227 V9GYV3 84 aa11.58□□□□□ -0.56
TMEM41A-202ENST00000382227 TNXBP22105 4242 aa11.58□□□□□ -0.56
TMEM41A-202ENST00000382227 TRAV13-1A0A0B4J241 112 aa11.57□□□□□ -0.56
TMEM41A-202ENST00000382227 A0A1W2PNN7 141 aa11.57□□□□□ -0.56
TMEM41A-202ENST00000382227 APOMO95445 188 aa11.57□□□□□ -0.56
TMEM41A-202ENST00000382227 C2orf48Q96LS8 159 aa11.57□□□□□ -0.56
TMEM41A-202ENST00000382227 LRP2P98164 4655 aa11.56□□□□□ -0.56
TMEM41A-202ENST00000382227 SRP19P09132 144 aaKnown RBP11.56□□□□□ -0.56
TMEM41A-202ENST00000382227 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.55□□□□□ -0.56
TMEM41A-202ENST00000382227 PPP1R2P9O14990 202 aa11.55□□□□□ -0.56
TMEM41A-202ENST00000382227 Q6ZUT4 128 aa11.55□□□□□ -0.56
TMEM41A-202ENST00000382227 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
TMEM41A-202ENST00000382227 TIMM21Q9BVV7 248 aa11.55□□□□□ -0.56
TMEM41A-202ENST00000382227 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
TMEM41A-202ENST00000382227 TMEM18Q96B42 140 aa11.54□□□□□ -0.56
TMEM41A-202ENST00000382227 MRPL51Q4U2R6 128 aaKnown RBP11.53□□□□□ -0.56
TMEM41A-202ENST00000382227 C9orf116Q5BN46 136 aaPredicted RBP11.53□□□□□ -0.56
TMEM41A-202ENST00000382227 FAM104BQ5XKR9 115 aa11.53□□□□□ -0.56
TMEM41A-202ENST00000382227 RPL18AQ02543 176 aaKnown RBP11.52□□□□□ -0.57
TMEM41A-202ENST00000382227 SPAG11BQ08648 103 aa11.52□□□□□ -0.57
TMEM41A-202ENST00000382227 TMEM241Q24JQ0 296 aa11.52□□□□□ -0.57
TMEM41A-202ENST00000382227 C20orf78Q9BR46 151 aa11.52□□□□□ -0.57
TMEM41A-202ENST00000382227 PSORS1C2Q9UIG4 136 aa11.52□□□□□ -0.57
TMEM41A-202ENST00000382227 hCG_2014768A0A024R1R8 64 aa11.51□□□□□ -0.57
TMEM41A-202ENST00000382227 LINC00862A6NCI5 91 aa11.51□□□□□ -0.57
TMEM41A-202ENST00000382227 MT-ND6P03923 174 aa11.51□□□□□ -0.57
TMEM41A-202ENST00000382227 RNF151Q2KHN1 245 aa11.51□□□□□ -0.57
TMEM41A-202ENST00000382227 OPRPNQ99935 248 aaPredicted RBP11.51□□□□□ -0.57
TMEM41A-202ENST00000382227 RNF213Q63HN8 5207 aa11.51□□□□□ -0.57
TMEM41A-202ENST00000382227 TRBV24-1A0A075B6N3 115 aa11.5□□□□□ -0.57
TMEM41A-202ENST00000382227 RPL23P62829 140 aaKnown RBP11.5□□□□□ -0.57
TMEM41A-202ENST00000382227 RPL32P62910 135 aaKnown RBP11.5□□□□□ -0.57
TMEM41A-202ENST00000382227 FAM74A3Q4VXF1 159 aa11.5□□□□□ -0.57
TMEM41A-202ENST00000382227 OR10D4PQ8NGN7 298 aa11.5□□□□□ -0.57
TMEM41A-202ENST00000382227 SMIM27A0A1W2PRY6 76 aa11.49□□□□□ -0.57
TMEM41A-202ENST00000382227 TCAPO15273 167 aa11.49□□□□□ -0.57
TMEM41A-202ENST00000382227 CKS2P33552 79 aa11.49□□□□□ -0.57
TMEM41A-202ENST00000382227 A0A1B0GW15 77 aa11.48□□□□□ -0.57
TMEM41A-202ENST00000382227 RPL39P62891 51 aaKnown RBP11.48□□□□□ -0.57
TMEM41A-202ENST00000382227 ADIRFQ15847 76 aa11.48□□□□□ -0.57
TMEM41A-202ENST00000382227 PHF5AQ7RTV0 110 aaKnown RBP11.48□□□□□ -0.57
TMEM41A-202ENST00000382227 FAM104AQ969W3 186 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms