RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ORMDL2Q53FV1 153 aa13.03□□□□□ -0.32
GTF3A-201ENST00000381140 MPV17L2Q567V2 206 aa13.03□□□□□ -0.32
GTF3A-201ENST00000381140 FAM19A2Q8N3H0 131 aa13.03□□□□□ -0.32
GTF3A-201ENST00000381140 TMEM243Q9BU79 118 aa13.03□□□□□ -0.32
GTF3A-201ENST00000381140 PSCAO43653 123 aa13.02□□□□□ -0.33
GTF3A-201ENST00000381140 FABP4P15090 132 aa13.02□□□□□ -0.33
GTF3A-201ENST00000381140 FAT2Q9NYQ8 4349 aa13.01□□□□□ -0.33
GTF3A-201ENST00000381140 A0A096LNJ9 63 aa13.01□□□□□ -0.33
GTF3A-201ENST00000381140 HBDP02042 147 aa13.01□□□□□ -0.33
GTF3A-201ENST00000381140 FCER1GP30273 86 aa13.01□□□□□ -0.33
GTF3A-201ENST00000381140 PKIAP61925 76 aa13.01□□□□□ -0.33
GTF3A-201ENST00000381140 Q8N976 141 aa13.01□□□□□ -0.33
GTF3A-201ENST00000381140 UBE2WQ96B02 151 aa13.01□□□□□ -0.33
GTF3A-201ENST00000381140 CHCHD7Q9BUK0 85 aa13.01□□□□□ -0.33
GTF3A-201ENST00000381140 TSHBP01222 138 aa13□□□□□ -0.33
GTF3A-201ENST00000381140 ANGP03950 147 aaKnown RBP13□□□□□ -0.33
GTF3A-201ENST00000381140 PMCHL1Q16048 86 aa13□□□□□ -0.33
GTF3A-201ENST00000381140 TRAV8-3A0A0A6YYJ7 113 aa12.99□□□□□ -0.33
GTF3A-201ENST00000381140 UBE2L6O14933 153 aa12.99□□□□□ -0.33
GTF3A-201ENST00000381140 RBX1P62877 108 aa12.98□□□□□ -0.33
GTF3A-201ENST00000381140 G0S2P27469 103 aa12.97□□□□□ -0.33
GTF3A-201ENST00000381140 LEPROTL1O95214 131 aa12.96□□□□□ -0.33
GTF3A-201ENST00000381140 CRPP02741 224 aa12.96□□□□□ -0.33
GTF3A-201ENST00000381140 CLPSL2Q6UWE3 100 aa12.96□□□□□ -0.33
GTF3A-201ENST00000381140 IGKV2D-24A0A075B6R9 120 aa12.95□□□□□ -0.34
GTF3A-201ENST00000381140 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
GTF3A-201ENST00000381140 OR10D4PQ8NGN7 298 aa12.95□□□□□ -0.34
GTF3A-201ENST00000381140 TM2D2Q9BX73 214 aa12.95□□□□□ -0.34
GTF3A-201ENST00000381140 HSPB8Q9UJY1 196 aa12.95□□□□□ -0.34
GTF3A-201ENST00000381140 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.94□□□□□ -0.34
GTF3A-201ENST00000381140 IGKV2-29A2NJV5 120 aaPredicted RBP12.94□□□□□ -0.34
GTF3A-201ENST00000381140 EREGO14944 169 aa12.94□□□□□ -0.34
GTF3A-201ENST00000381140 SPATA12Q7Z6I5 190 aa12.94□□□□□ -0.34
GTF3A-201ENST00000381140 TOMM6Q96B49 74 aa12.94□□□□□ -0.34
GTF3A-201ENST00000381140 RMI2Q96E14 147 aa12.94□□□□□ -0.34
GTF3A-201ENST00000381140 BIRC6Q9NR09 4857 aa12.94□□□□□ -0.34
GTF3A-201ENST00000381140 A0A087WTM6 91 aa12.94□□□□□ -0.34
GTF3A-201ENST00000381140 C2orf66Q6UXQ4 117 aa12.94□□□□□ -0.34
GTF3A-201ENST00000381140 LINC00269Q8N2A0 174 aa12.94□□□□□ -0.34
GTF3A-201ENST00000381140 HECTD4Q9Y4D8 3996 aa12.93□□□□□ -0.34
GTF3A-201ENST00000381140 AKR1D1P51857 326 aa12.93□□□□□ -0.34
GTF3A-201ENST00000381140 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
GTF3A-201ENST00000381140 ENHOQ6UWT2 76 aa12.93□□□□□ -0.34
GTF3A-201ENST00000381140 C20orf203Q8NBC4 194 aa12.93□□□□□ -0.34
GTF3A-201ENST00000381140 CYSLTR1Q9Y271 337 aa12.93□□□□□ -0.34
GTF3A-201ENST00000381140 IGLV4-60A0A075B6I1 120 aa12.92□□□□□ -0.34
GTF3A-201ENST00000381140 PKD1P98161 4303 aa12.92□□□□□ -0.34
GTF3A-201ENST00000381140 FUSP35637 526 aaKnown RBP eCLIP12.91□□□□□ -0.34
GTF3A-201ENST00000381140 LINC00173Q6ZV60 143 aa12.91□□□□□ -0.34
GTF3A-201ENST00000381140 C1orf43Q9BWL3 253 aa12.91□□□□□ -0.34
GTF3A-201ENST00000381140 ATP5LO75964 103 aa12.9□□□□□ -0.34
GTF3A-201ENST00000381140 KRTAP10-2P60368 255 aa12.9□□□□□ -0.34
GTF3A-201ENST00000381140 A0A1B0GUV1 79 aa12.89□□□□□ -0.35
GTF3A-201ENST00000381140 C16orf90A8MZG2 172 aa12.89□□□□□ -0.35
GTF3A-201ENST00000381140 LECT2O14960 151 aa12.89□□□□□ -0.35
GTF3A-201ENST00000381140 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
GTF3A-201ENST00000381140 FGF6P10767 208 aa12.89□□□□□ -0.35
GTF3A-201ENST00000381140 REG3AQ06141 175 aa12.89□□□□□ -0.35
GTF3A-201ENST00000381140 IFI27L1Q96BM0 104 aa12.89□□□□□ -0.35
GTF3A-201ENST00000381140 COX11Q9Y6N1 276 aa12.89□□□□□ -0.35
GTF3A-201ENST00000381140 LRCOL1A6NCL2 159 aa12.88□□□□□ -0.35
GTF3A-201ENST00000381140 ERASQ7Z444 233 aa12.88□□□□□ -0.35
GTF3A-201ENST00000381140 BAALCQ8WXS3 180 aa12.88□□□□□ -0.35
GTF3A-201ENST00000381140 MAP1LC3CQ9BXW4 147 aa12.88□□□□□ -0.35
GTF3A-201ENST00000381140 IGKV3OR2-268A0A0C4DH90 116 aa12.87□□□□□ -0.35
GTF3A-201ENST00000381140 H7C423 109 aa12.87□□□□□ -0.35
GTF3A-201ENST00000381140 KRTDAPP60985 99 aa12.87□□□□□ -0.35
GTF3A-201ENST00000381140 RPL39P62891 51 aaKnown RBP12.87□□□□□ -0.35
GTF3A-201ENST00000381140 MIAQ16674 131 aa12.87□□□□□ -0.35
GTF3A-201ENST00000381140 MAPKAPK5-AS1Q8N8E1 139 aa12.87□□□□□ -0.35
GTF3A-201ENST00000381140 SCGB3A1Q96QR1 104 aa12.87□□□□□ -0.35
GTF3A-201ENST00000381140 TIMM17AQ99595 171 aa12.87□□□□□ -0.35
GTF3A-201ENST00000381140 PRR34Q9NV39 138 aa12.87□□□□□ -0.35
GTF3A-201ENST00000381140 PKHD1P08F94 4074 aa12.86□□□□□ -0.35
GTF3A-201ENST00000381140 IGLV10-54A0A075B6I4 117 aa12.86□□□□□ -0.35
GTF3A-201ENST00000381140 IGIPA6NJ69 53 aa12.86□□□□□ -0.35
GTF3A-201ENST00000381140 WFDC2Q14508 124 aa12.86□□□□□ -0.35
GTF3A-201ENST00000381140 DNAH11Q96DT5 4516 aa12.85□□□□□ -0.35
GTF3A-201ENST00000381140 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.85□□□□□ -0.35
GTF3A-201ENST00000381140 SYS1-DBNDD2H3BUS1 97 aa12.85□□□□□ -0.35
GTF3A-201ENST00000381140 NPSP0C0P6 89 aa12.85□□□□□ -0.35
GTF3A-201ENST00000381140 JOSD1Q15040 202 aaPredicted RBP12.85□□□□□ -0.35
GTF3A-201ENST00000381140 TMEM141Q96I45 108 aa12.85□□□□□ -0.35
GTF3A-201ENST00000381140 TMEM101Q96IK0 257 aa12.85□□□□□ -0.35
GTF3A-201ENST00000381140 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
GTF3A-201ENST00000381140 PET117Q6UWS5 81 aa12.84□□□□□ -0.35
GTF3A-201ENST00000381140 TIMM21Q9BVV7 248 aa12.84□□□□□ -0.35
GTF3A-201ENST00000381140 SPANXA1Q9NS26 97 aa12.84□□□□□ -0.35
GTF3A-201ENST00000381140 PYY3Q5JQD4 70 aa12.83□□□□□ -0.36
GTF3A-201ENST00000381140 OR5A1Q8NGJ0 315 aa12.83□□□□□ -0.36
GTF3A-201ENST00000381140 SMIM6P0DI80 62 aa12.82□□□□□ -0.36
GTF3A-201ENST00000381140 ZNF25P17030 456 aaPredicted RBP12.82□□□□□ -0.36
GTF3A-201ENST00000381140 SMAGPQ0VAQ4 97 aa12.82□□□□□ -0.36
GTF3A-201ENST00000381140 MRPL52Q86TS9 123 aaKnown RBP12.82□□□□□ -0.36
GTF3A-201ENST00000381140 Q8N814 137 aa12.82□□□□□ -0.36
GTF3A-201ENST00000381140 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
GTF3A-201ENST00000381140 UBE2D4Q9Y2X8 147 aa12.82□□□□□ -0.36
GTF3A-201ENST00000381140 DGAT2L7PQ6IED9 249 aa12.81□□□□□ -0.36
GTF3A-201ENST00000381140 Q6ZN92 141 aa12.81□□□□□ -0.36
GTF3A-201ENST00000381140 CSDC2Q9Y534 153 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms