RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.86
VCX3B-201ENST00000381029 CSDC2Q9Y534 153 aaKnown RBP9.71□□□□□ -0.86
VCX3B-201ENST00000381029 AMMECR1LQ6DCA0 310 aa9.7□□□□□ -0.86
VCX3B-201ENST00000381029 GNB1LQ9BYB4 327 aa9.7□□□□□ -0.86
VCX3B-201ENST00000381029 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
VCX3B-201ENST00000381029 IGLV10-54A0A075B6I4 117 aa9.69□□□□□ -0.86
VCX3B-201ENST00000381029 S100PP25815 95 aa9.69□□□□□ -0.86
VCX3B-201ENST00000381029 FCER1GP30273 86 aa9.69□□□□□ -0.86
VCX3B-201ENST00000381029 KRTAP10-1P60331 282 aa9.69□□□□□ -0.86
VCX3B-201ENST00000381029 RNASEKQ6P5S7 137 aaKnown RBP9.69□□□□□ -0.86
VCX3B-201ENST00000381029 YPEL4Q96NS1 127 aa9.69□□□□□ -0.86
VCX3B-201ENST00000381029 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
VCX3B-201ENST00000381029 TCAPO15273 167 aa9.68□□□□□ -0.86
VCX3B-201ENST00000381029 CDK2AP2O75956 126 aa9.68□□□□□ -0.86
VCX3B-201ENST00000381029 HLA-DQA1P01909 254 aa9.68□□□□□ -0.86
VCX3B-201ENST00000381029 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
VCX3B-201ENST00000381029 OR5A1Q8NGJ0 315 aa9.68□□□□□ -0.86
VCX3B-201ENST00000381029 ZNF664Q8N3J9 261 aa9.67□□□□□ -0.86
VCX3B-201ENST00000381029 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
VCX3B-201ENST00000381029 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
VCX3B-201ENST00000381029 KIAA1644Q3SXP7 199 aa9.66□□□□□ -0.86
VCX3B-201ENST00000381029 Q8N8P6 123 aa9.66□□□□□ -0.86
VCX3B-201ENST00000381029 MAP1LC3AQ9H492 121 aa9.66□□□□□ -0.86
VCX3B-201ENST00000381029 IGLV5-52A0A0A0MRZ9 124 aa9.65□□□□□ -0.86
VCX3B-201ENST00000381029 LINC00959A0A1B0GUT2 108 aa9.65□□□□□ -0.86
VCX3B-201ENST00000381029 PRSS1P07477 247 aa9.65□□□□□ -0.86
VCX3B-201ENST00000381029 COX19Q49B96 90 aa9.65□□□□□ -0.86
VCX3B-201ENST00000381029 Q6ZUT4 128 aa9.65□□□□□ -0.86
VCX3B-201ENST00000381029 CHCHD10Q8WYQ3 142 aaPredicted RBP9.65□□□□□ -0.86
VCX3B-201ENST00000381029 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
VCX3B-201ENST00000381029 LOC389332A0A1B0GUA5 103 aa9.64□□□□□ -0.87
VCX3B-201ENST00000381029 MT-ND6P03923 174 aa9.64□□□□□ -0.87
VCX3B-201ENST00000381029 GCSHP23434 173 aa9.64□□□□□ -0.87
VCX3B-201ENST00000381029 FOXI1Q12951 378 aa9.64□□□□□ -0.87
VCX3B-201ENST00000381029 TMEM101Q96IK0 257 aa9.64□□□□□ -0.87
VCX3B-201ENST00000381029 FAT1Q14517 4588 aa9.64□□□□□ -0.87
VCX3B-201ENST00000381029 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.63□□□□□ -0.87
VCX3B-201ENST00000381029 IGKV3OR2-268A0A0C4DH90 116 aa9.63□□□□□ -0.87
VCX3B-201ENST00000381029 GAGE12HA6NDE8 117 aa9.63□□□□□ -0.87
VCX3B-201ENST00000381029 LINC01546A6NGU7 62 aa9.63□□□□□ -0.87
VCX3B-201ENST00000381029 XGP55808 180 aa9.63□□□□□ -0.87
VCX3B-201ENST00000381029 MRPS36P82909 103 aaKnown RBP9.63□□□□□ -0.87
VCX3B-201ENST00000381029 C15orf56Q8N910 161 aa9.63□□□□□ -0.87
VCX3B-201ENST00000381029 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
VCX3B-201ENST00000381029 K7EMI3 77 aa9.62□□□□□ -0.87
VCX3B-201ENST00000381029 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
VCX3B-201ENST00000381029 C14orf177Q52M58 125 aa9.62□□□□□ -0.87
VCX3B-201ENST00000381029 RNASE13Q5GAN3 156 aaKnown RBP9.62□□□□□ -0.87
VCX3B-201ENST00000381029 TMEM18Q96B42 140 aa9.62□□□□□ -0.87
VCX3B-201ENST00000381029 OPRPNQ99935 248 aaPredicted RBP9.62□□□□□ -0.87
VCX3B-201ENST00000381029 MRPL18Q9H0U6 180 aaKnown RBP9.62□□□□□ -0.87
VCX3B-201ENST00000381029 NXT2Q9NPJ8 142 aaKnown RBP9.62□□□□□ -0.87
VCX3B-201ENST00000381029 PYGO1Q9Y3Y4 419 aa9.62□□□□□ -0.87
VCX3B-201ENST00000381029 SLPIP03973 132 aa9.61□□□□□ -0.87
VCX3B-201ENST00000381029 SMAGPQ0VAQ4 97 aa9.61□□□□□ -0.87
VCX3B-201ENST00000381029 Q6ZSA8 131 aa9.61□□□□□ -0.87
VCX3B-201ENST00000381029 FAM30AQ9NZY2 134 aa9.61□□□□□ -0.87
VCX3B-201ENST00000381029 CCL25O15444 150 aa9.6□□□□□ -0.87
VCX3B-201ENST00000381029 RAB5AP20339 215 aa9.6□□□□□ -0.87
VCX3B-201ENST00000381029 DGAT2L7PQ6IED9 249 aa9.6□□□□□ -0.87
VCX3B-201ENST00000381029 IGLV4-3A0A075B6K6 122 aa9.59□□□□□ -0.87
VCX3B-201ENST00000381029 XCL1P47992 114 aa9.59□□□□□ -0.87
VCX3B-201ENST00000381029 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
VCX3B-201ENST00000381029 CD164L2Q6UWJ8 174 aa9.59□□□□□ -0.87
VCX3B-201ENST00000381029 SMCO4Q9NRQ5 59 aa9.59□□□□□ -0.87
VCX3B-201ENST00000381029 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
VCX3B-201ENST00000381029 ATP6V1G1O75348 118 aa9.58□□□□□ -0.88
VCX3B-201ENST00000381029 CNBPP62633 177 aaKnown RBP9.58□□□□□ -0.88
VCX3B-201ENST00000381029 FABP9Q0Z7S8 132 aa9.58□□□□□ -0.88
VCX3B-201ENST00000381029 ORMDL2Q53FV1 153 aa9.58□□□□□ -0.88
VCX3B-201ENST00000381029 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
VCX3B-201ENST00000381029 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
VCX3B-201ENST00000381029 CBLN2Q8IUK8 224 aa9.58□□□□□ -0.88
VCX3B-201ENST00000381029 URB1-AS1Q96HZ7 61 aa9.58□□□□□ -0.88
VCX3B-201ENST00000381029 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
VCX3B-201ENST00000381029 C1orf196B1AJZ1 125 aa9.57□□□□□ -0.88
VCX3B-201ENST00000381029 S100A1P23297 94 aa9.57□□□□□ -0.88
VCX3B-201ENST00000381029 SS18Q15532 418 aa9.57□□□□□ -0.88
VCX3B-201ENST00000381029 C9orf163Q8N9P6 203 aa9.57□□□□□ -0.88
VCX3B-201ENST00000381029 C18orf32Q8TCD1 76 aa9.56□□□□□ -0.88
VCX3B-201ENST00000381029 CYSLTR1Q9Y271 337 aa9.56□□□□□ -0.88
VCX3B-201ENST00000381029 TRAPPC1Q9Y5R8 145 aa9.56□□□□□ -0.88
VCX3B-201ENST00000381029 TRAV13-1A0A0B4J241 112 aa9.55□□□□□ -0.88
VCX3B-201ENST00000381029 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
VCX3B-201ENST00000381029 NPSP0C0P6 89 aa9.55□□□□□ -0.88
VCX3B-201ENST00000381029 TOMM6Q96B49 74 aa9.55□□□□□ -0.88
VCX3B-201ENST00000381029 AMELXQ99217 191 aa9.55□□□□□ -0.88
VCX3B-201ENST00000381029 KRTAP4-5Q9BYR2 181 aa9.55□□□□□ -0.88
VCX3B-201ENST00000381029 hDV102S1A0JD36 115 aa9.54□□□□□ -0.88
VCX3B-201ENST00000381029 PRSS3P2Q8NHM4 247 aa9.54□□□□□ -0.88
VCX3B-201ENST00000381029 A0A096LNJ9 63 aa9.53□□□□□ -0.88
VCX3B-201ENST00000381029 ZC2HC1BQ5TFG8 222 aa9.53□□□□□ -0.88
VCX3B-201ENST00000381029 CFAP161Q6P656 301 aa9.53□□□□□ -0.88
VCX3B-201ENST00000381029 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
VCX3B-201ENST00000381029 IFITM10A6NMD0 228 aa9.52□□□□□ -0.89
VCX3B-201ENST00000381029 SCO1O75880 301 aa9.52□□□□□ -0.89
VCX3B-201ENST00000381029 UBE2D1P51668 147 aa9.52□□□□□ -0.89
VCX3B-201ENST00000381029 HIGD2BQ4VC39 106 aa9.52□□□□□ -0.89
VCX3B-201ENST00000381029 LINC00242Q5T6M2 205 aa9.52□□□□□ -0.89
VCX3B-201ENST00000381029 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms