RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 NDUFA7O95182 113 aa10.39□□□□□ -0.75
CLCN4-201ENST00000380829 ORMDL2Q53FV1 153 aa10.39□□□□□ -0.75
CLCN4-201ENST00000380829 PPDPFQ9H3Y8 114 aa10.39□□□□□ -0.75
CLCN4-201ENST00000380829 PPP1R17O96001 155 aa10.39□□□□□ -0.75
CLCN4-201ENST00000380829 LINC01587Q99440 93 aa10.38□□□□□ -0.75
CLCN4-201ENST00000380829 XCL2Q9UBD3 114 aa10.38□□□□□ -0.75
CLCN4-201ENST00000380829 STHQ8IWL8 128 aa10.38□□□□□ -0.75
CLCN4-201ENST00000380829 NSD1Q96L73 2696 aaPredicted RBP10.38□□□□□ -0.75
CLCN4-201ENST00000380829 TRAV8-4A0A0B4J246 113 aa10.37□□□□□ -0.75
CLCN4-201ENST00000380829 KRTAP10-3P60369 221 aa10.37□□□□□ -0.75
CLCN4-201ENST00000380829 CHCHD5Q9BSY4 110 aa10.37□□□□□ -0.75
CLCN4-201ENST00000380829 IGLV4-69A0A075B6H9 119 aa10.37□□□□□ -0.75
CLCN4-201ENST00000380829 INSP01308 110 aa10.37□□□□□ -0.75
CLCN4-201ENST00000380829 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
CLCN4-201ENST00000380829 A4D1N5 150 aa10.36□□□□□ -0.75
CLCN4-201ENST00000380829 SDHAF1A6NFY7 115 aa10.36□□□□□ -0.75
CLCN4-201ENST00000380829 M0QY20 66 aa10.36□□□□□ -0.75
CLCN4-201ENST00000380829 FN1P02751 2386 aaKnown RBP10.36□□□□□ -0.75
CLCN4-201ENST00000380829 POLR2KP53803 58 aaKnown RBP10.36□□□□□ -0.75
CLCN4-201ENST00000380829 JMJD1CQ15652 2540 aa10.35□□□□□ -0.75
CLCN4-201ENST00000380829 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
CLCN4-201ENST00000380829 Q6Q795 121 aa10.35□□□□□ -0.75
CLCN4-201ENST00000380829 WFDC10AQ9H1F0 79 aa10.35□□□□□ -0.75
CLCN4-201ENST00000380829 Q1RN00 199 aa10.35□□□□□ -0.75
CLCN4-201ENST00000380829 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
CLCN4-201ENST00000380829 TSHBP01222 138 aa10.34□□□□□ -0.75
CLCN4-201ENST00000380829 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
CLCN4-201ENST00000380829 ZNF415Q09FC8 603 aa10.34□□□□□ -0.75
CLCN4-201ENST00000380829 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
CLCN4-201ENST00000380829 VCYO14598 125 aa10.34□□□□□ -0.75
CLCN4-201ENST00000380829 IGLV1-51P01701 117 aa10.34□□□□□ -0.75
CLCN4-201ENST00000380829 LINC01620Q4KN68 170 aa10.34□□□□□ -0.75
CLCN4-201ENST00000380829 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
CLCN4-201ENST00000380829 M0R2P5 195 aa10.33□□□□□ -0.76
CLCN4-201ENST00000380829 M0QXV9 152 aa10.33□□□□□ -0.76
CLCN4-201ENST00000380829 HERVK_113P61574 105 aa10.33□□□□□ -0.76
CLCN4-201ENST00000380829 TMEM263Q8WUH6 116 aaKnown RBP10.33□□□□□ -0.76
CLCN4-201ENST00000380829 TRBV6-5A0A0K0K1A5 114 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 P0DMU3 169 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 FAM231AP0DMU4 169 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 FAM231CP0DMU5 169 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 RPL39P62891 51 aaKnown RBP10.32□□□□□ -0.76
CLCN4-201ENST00000380829 C1orf158Q8N1D5 194 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 AMELXQ99217 191 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 TP53TG1Q9Y2A0 90 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 C2CD3Q4AC94 2353 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
CLCN4-201ENST00000380829 IGHV3-64A0A075B6Q5 118 aa10.31□□□□□ -0.76
CLCN4-201ENST00000380829 PF4P02776 101 aa10.31□□□□□ -0.76
CLCN4-201ENST00000380829 ATXN8Q156A1 80 aa10.31□□□□□ -0.76
CLCN4-201ENST00000380829 ZNRF2Q8NHG8 242 aa10.31□□□□□ -0.76
CLCN4-201ENST00000380829 LINC00467Q9BRT7 94 aa10.31□□□□□ -0.76
CLCN4-201ENST00000380829 NOTCH3Q9UM47 2321 aa10.3□□□□□ -0.76
CLCN4-201ENST00000380829 J3QQQ9 107 aa10.29□□□□□ -0.76
CLCN4-201ENST00000380829 RPL35AP18077 110 aaKnown RBP10.29□□□□□ -0.76
CLCN4-201ENST00000380829 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
CLCN4-201ENST00000380829 NACAE9PAV3 2078 aa10.29□□□□□ -0.76
CLCN4-201ENST00000380829 Q6ZSN1 163 aa10.29□□□□□ -0.76
CLCN4-201ENST00000380829 MUSTN1Q8IVN3 82 aa10.29□□□□□ -0.76
CLCN4-201ENST00000380829 C19orf73Q9NVV2 129 aa10.29□□□□□ -0.76
CLCN4-201ENST00000380829 Q9UF83 564 aa10.29□□□□□ -0.76
CLCN4-201ENST00000380829 TRIAP1O43715 76 aa10.28□□□□□ -0.76
CLCN4-201ENST00000380829 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
CLCN4-201ENST00000380829 C5orf47Q569G3 176 aa10.28□□□□□ -0.76
CLCN4-201ENST00000380829 F8P00451 2351 aa10.28□□□□□ -0.76
CLCN4-201ENST00000380829 TEP1Q99973 2627 aaKnown RBP10.28□□□□□ -0.76
CLCN4-201ENST00000380829 WIPF1O43516 503 aa10.28□□□□□ -0.76
CLCN4-201ENST00000380829 BEAN1Q3B7T3 259 aa10.28□□□□□ -0.76
CLCN4-201ENST00000380829 TRBV10-2A0A0K0K1G8 114 aa10.27□□□□□ -0.76
CLCN4-201ENST00000380829 IGIPA6NJ69 53 aa10.27□□□□□ -0.76
CLCN4-201ENST00000380829 GIG44P09565 113 aaPredicted RBP10.27□□□□□ -0.76
CLCN4-201ENST00000380829 PMVKQ15126 192 aa10.27□□□□□ -0.76
CLCN4-201ENST00000380829 C2orf82Q6UX34 121 aa10.27□□□□□ -0.76
CLCN4-201ENST00000380829 LINC00694P0DN24 101 aa10.27□□□□□ -0.77
CLCN4-201ENST00000380829 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.77
CLCN4-201ENST00000380829 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
CLCN4-201ENST00000380829 I3L3M4 83 aa10.26□□□□□ -0.77
CLCN4-201ENST00000380829 CMC4P56277 68 aaPredicted RBP10.26□□□□□ -0.77
CLCN4-201ENST00000380829 PIK3CD-AS1Q5SR53 167 aa10.26□□□□□ -0.77
CLCN4-201ENST00000380829 VWFP04275 2813 aa10.26□□□□□ -0.77
CLCN4-201ENST00000380829 A0A0B4J2C4 111 aa10.26□□□□□ -0.77
CLCN4-201ENST00000380829 TRGV1A0A0A0MS02 117 aa10.25□□□□□ -0.77
CLCN4-201ENST00000380829 FAM236AA0A1B0GUQ0 79 aa10.25□□□□□ -0.77
CLCN4-201ENST00000380829 FAM236BA0A1B0GV22 79 aa10.25□□□□□ -0.77
CLCN4-201ENST00000380829 H7C423 109 aa10.25□□□□□ -0.77
CLCN4-201ENST00000380829 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
CLCN4-201ENST00000380829 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
CLCN4-201ENST00000380829 SPATA3Q8NHX4 192 aa10.25□□□□□ -0.77
CLCN4-201ENST00000380829 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
CLCN4-201ENST00000380829 EDA2RQ9HAV5 297 aa10.25□□□□□ -0.77
CLCN4-201ENST00000380829 CSDC2Q9Y534 153 aaKnown RBP10.25□□□□□ -0.77
CLCN4-201ENST00000380829 RHOHQ15669 191 aa10.24□□□□□ -0.77
CLCN4-201ENST00000380829 CLEC2BQ92478 149 aa10.24□□□□□ -0.77
CLCN4-201ENST00000380829 TMEM126AQ9H061 195 aa10.24□□□□□ -0.77
CLCN4-201ENST00000380829 TENM1Q9UKZ4 2725 aa10.24□□□□□ -0.77
CLCN4-201ENST00000380829 MRPL23Q16540 153 aaKnown RBP10.24□□□□□ -0.77
CLCN4-201ENST00000380829 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
CLCN4-201ENST00000380829 TIMM17AQ99595 171 aa10.24□□□□□ -0.77
CLCN4-201ENST00000380829 RS1O15537 224 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms