RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 TSHBP01222 138 aa13.93□□□□□ -0.18
CDKN2B-202ENST00000380142 TAGLN2P37802 199 aaKnown RBP13.93□□□□□ -0.18
CDKN2B-202ENST00000380142 RPP21Q9H633 154 aaKnown RBP13.93□□□□□ -0.18
CDKN2B-202ENST00000380142 PKIGQ9Y2B9 76 aa13.93□□□□□ -0.18
CDKN2B-202ENST00000380142 GAGE2BQ13066 116 aa13.92□□□□□ -0.18
CDKN2B-202ENST00000380142 TEX261Q6UWH6 196 aa13.92□□□□□ -0.18
CDKN2B-202ENST00000380142 IGLV4-69A0A075B6H9 119 aa13.91□□□□□ -0.18
CDKN2B-202ENST00000380142 CD164L2Q6UWJ8 174 aa13.91□□□□□ -0.18
CDKN2B-202ENST00000380142 CDC42SE2Q9NRR3 84 aa13.91□□□□□ -0.18
CDKN2B-202ENST00000380142 TRBV6-5A0A0K0K1A5 114 aa13.9□□□□□ -0.18
CDKN2B-202ENST00000380142 LOC107984640A0A0U1RRK4 108 aa13.9□□□□□ -0.18
CDKN2B-202ENST00000380142 I3L3M4 83 aa13.9□□□□□ -0.18
CDKN2B-202ENST00000380142 ZNF561-AS1K7EIQ3 104 aa13.9□□□□□ -0.18
CDKN2B-202ENST00000380142 PMCHP20382 165 aa13.9□□□□□ -0.18
CDKN2B-202ENST00000380142 CAMPP49913 170 aa13.9□□□□□ -0.18
CDKN2B-202ENST00000380142 BTF3L4Q96K17 158 aa13.9□□□□□ -0.18
CDKN2B-202ENST00000380142 TMEM242Q9NWH2 141 aa13.9□□□□□ -0.18
CDKN2B-202ENST00000380142 CEBPGP53567 150 aa13.89□□□□□ -0.19
CDKN2B-202ENST00000380142 SMIM15Q7Z3B0 74 aa13.89□□□□□ -0.19
CDKN2B-202ENST00000380142 NUP35Q8NFH5 326 aa13.89□□□□□ -0.19
CDKN2B-202ENST00000380142 OCC1Q8TAD7 63 aa13.89□□□□□ -0.19
CDKN2B-202ENST00000380142 TMEM101Q96IK0 257 aa13.89□□□□□ -0.19
CDKN2B-202ENST00000380142 EIF5A2Q9GZV4 153 aaKnown RBP13.89□□□□□ -0.19
CDKN2B-202ENST00000380142 SS18Q15532 418 aa13.88□□□□□ -0.19
CDKN2B-202ENST00000380142 MRPL52Q86TS9 123 aaKnown RBP13.88□□□□□ -0.19
CDKN2B-202ENST00000380142 C9orf116Q5BN46 136 aaPredicted RBP13.87□□□□□ -0.19
CDKN2B-202ENST00000380142 PHF5AQ7RTV0 110 aaKnown RBP13.87□□□□□ -0.19
CDKN2B-202ENST00000380142 PRR26Q8N8Z3 221 aa13.87□□□□□ -0.19
CDKN2B-202ENST00000380142 FAM210AQ96ND0 272 aa13.87□□□□□ -0.19
CDKN2B-202ENST00000380142 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.86□□□□□ -0.19
CDKN2B-202ENST00000380142 POLR2KP53803 58 aaKnown RBP13.85□□□□□ -0.19
CDKN2B-202ENST00000380142 KRTAP11-1Q8IUC1 163 aa13.85□□□□□ -0.19
CDKN2B-202ENST00000380142 ZNF664Q8N3J9 261 aa13.85□□□□□ -0.19
CDKN2B-202ENST00000380142 MRAP2Q96G30 205 aa13.85□□□□□ -0.19
CDKN2B-202ENST00000380142 TMEM250H0YL14 139 aa13.84□□□□□ -0.19
CDKN2B-202ENST00000380142 MT-ND6P03923 174 aa13.84□□□□□ -0.19
CDKN2B-202ENST00000380142 C1orf137Q5JT78 98 aa13.84□□□□□ -0.19
CDKN2B-202ENST00000380142 APOMO95445 188 aa13.82□□□□□ -0.2
CDKN2B-202ENST00000380142 ISOC2Q96AB3 205 aa13.82□□□□□ -0.2
CDKN2B-202ENST00000380142 ST20Q9HBF5 79 aa13.82□□□□□ -0.2
CDKN2B-202ENST00000380142 CAMK2N2Q96S95 79 aa13.81□□□□□ -0.2
CDKN2B-202ENST00000380142 TRBV27A0A0K0K1C4 114 aa13.8□□□□□ -0.2
CDKN2B-202ENST00000380142 GATCO43716 136 aaKnown RBP13.8□□□□□ -0.2
CDKN2B-202ENST00000380142 SRP19P09132 144 aaKnown RBP13.8□□□□□ -0.2
CDKN2B-202ENST00000380142 RNASE13Q5GAN3 156 aaKnown RBP13.8□□□□□ -0.2
CDKN2B-202ENST00000380142 OPRPNQ99935 248 aaPredicted RBP13.8□□□□□ -0.2
CDKN2B-202ENST00000380142 COX7A2LO14548 114 aa13.79□□□□□ -0.2
CDKN2B-202ENST00000380142 SRSF3P84103 164 aaKnown RBP13.79□□□□□ -0.2
CDKN2B-202ENST00000380142 C2orf48Q96LS8 159 aa13.79□□□□□ -0.2
CDKN2B-202ENST00000380142 SMIM7Q9BQ49 75 aa13.79□□□□□ -0.2
CDKN2B-202ENST00000380142 C7orf77A4D0Y5 90 aa13.78□□□□□ -0.2
CDKN2B-202ENST00000380142 A8MWL6 223 aa13.78□□□□□ -0.2
CDKN2B-202ENST00000380142 IGLV7-43P04211 117 aa13.78□□□□□ -0.2
CDKN2B-202ENST00000380142 MALP21145 153 aa13.78□□□□□ -0.2
CDKN2B-202ENST00000380142 RPL18AQ02543 176 aaKnown RBP13.78□□□□□ -0.2
CDKN2B-202ENST00000380142 MUC2Q02817 5179 aa13.78□□□□□ -0.2
CDKN2B-202ENST00000380142 C1orf196B1AJZ1 125 aa13.77□□□□□ -0.21
CDKN2B-202ENST00000380142 C5orf38Q86SI9 138 aa13.77□□□□□ -0.21
CDKN2B-202ENST00000380142 ZNF727A8MUV8 499 aa13.76□□□□□ -0.21
CDKN2B-202ENST00000380142 C9JQL5 133 aa13.76□□□□□ -0.21
CDKN2B-202ENST00000380142 RAB4AP20338 218 aa13.76□□□□□ -0.21
CDKN2B-202ENST00000380142 FAM231DQ6ZW35 169 aa13.76□□□□□ -0.21
CDKN2B-202ENST00000380142 BORCS7Q96B45 105 aa13.76□□□□□ -0.21
CDKN2B-202ENST00000380142 UBE2D4Q9Y2X8 147 aa13.76□□□□□ -0.21
CDKN2B-202ENST00000380142 FAM168BA1KXE4 195 aa13.75□□□□□ -0.21
CDKN2B-202ENST00000380142 KRTAP1-4P0C5Y4 121 aa13.75□□□□□ -0.21
CDKN2B-202ENST00000380142 H0Y9J4 135 aa13.74□□□□□ -0.21
CDKN2B-202ENST00000380142 DIRC1Q969H9 104 aa13.74□□□□□ -0.21
CDKN2B-202ENST00000380142 TMEM191AQ9H0A3 160 aa13.74□□□□□ -0.21
CDKN2B-202ENST00000380142 CSDC2Q9Y534 153 aaKnown RBP13.74□□□□□ -0.21
CDKN2B-202ENST00000380142 TRAV13-1A0A0B4J241 112 aa13.73□□□□□ -0.21
CDKN2B-202ENST00000380142 SMKR1H3BMG3 65 aa13.73□□□□□ -0.21
CDKN2B-202ENST00000380142 RAB14P61106 215 aa13.73□□□□□ -0.21
CDKN2B-202ENST00000380142 PEA15Q15121 130 aa13.73□□□□□ -0.21
CDKN2B-202ENST00000380142 RNF151Q2KHN1 245 aa13.73□□□□□ -0.21
CDKN2B-202ENST00000380142 Q6ZUT4 128 aa13.73□□□□□ -0.21
CDKN2B-202ENST00000380142 KRTAP7-1Q8IUC3 87 aa13.73□□□□□ -0.21
CDKN2B-202ENST00000380142 AMN1Q8IY45 258 aa13.73□□□□□ -0.21
CDKN2B-202ENST00000380142 SPAG11BQ08648 103 aa13.72□□□□□ -0.21
CDKN2B-202ENST00000380142 KRTAP9-2Q9BYQ4 174 aa13.72□□□□□ -0.21
CDKN2B-202ENST00000380142 CT83Q5H943 113 aa13.71□□□□□ -0.21
CDKN2B-202ENST00000380142 LINC01551Q86U37 167 aa13.71□□□□□ -0.21
CDKN2B-202ENST00000380142 FAM104AQ969W3 186 aa13.71□□□□□ -0.21
CDKN2B-202ENST00000380142 IFITM2Q01629 132 aa13.7□□□□□ -0.22
CDKN2B-202ENST00000380142 C10orf25Q5T742 122 aa13.7□□□□□ -0.22
CDKN2B-202ENST00000380142 NRACQ8N912 160 aa13.7□□□□□ -0.22
CDKN2B-202ENST00000380142 A0A087WZ39 114 aa13.69□□□□□ -0.22
CDKN2B-202ENST00000380142 A0A1B0GUT8 65 aa13.69□□□□□ -0.22
CDKN2B-202ENST00000380142 MRPL35Q9NZE8 188 aaKnown RBP13.69□□□□□ -0.22
CDKN2B-202ENST00000380142 HIGD1CA8MV81 97 aa13.68□□□□□ -0.22
CDKN2B-202ENST00000380142 VCYO14598 125 aa13.68□□□□□ -0.22
CDKN2B-202ENST00000380142 IGLV1-50A0A075B6I6 118 aa13.67□□□□□ -0.22
CDKN2B-202ENST00000380142 FCER1GP30273 86 aa13.67□□□□□ -0.22
CDKN2B-202ENST00000380142 TMEM241Q24JQ0 296 aa13.67□□□□□ -0.22
CDKN2B-202ENST00000380142 ADIRFQ15847 76 aa13.66□□□□□ -0.22
CDKN2B-202ENST00000380142 FAM74A3Q4VXF1 159 aa13.66□□□□□ -0.22
CDKN2B-202ENST00000380142 OR10D4PQ8NGN7 298 aa13.66□□□□□ -0.22
CDKN2B-202ENST00000380142 TSKUQ8WUA8 353 aa13.66□□□□□ -0.22
CDKN2B-202ENST00000380142 SUMO2P61956 95 aaKnown RBP13.65□□□□□ -0.22
CDKN2B-202ENST00000380142 RPL23P62829 140 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms