RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TRGC1P0CF51 173 aa11.04□□□□□ -0.64
PDLIM4-202ENST00000379018 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
PDLIM4-202ENST00000379018 TMEM241Q24JQ0 296 aa11.03□□□□□ -0.64
PDLIM4-202ENST00000379018 CENPWQ5EE01 88 aa11.03□□□□□ -0.64
PDLIM4-202ENST00000379018 Q6ZRP5 223 aa11.03□□□□□ -0.64
PDLIM4-202ENST00000379018 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
PDLIM4-202ENST00000379018 SMIM7Q9BQ49 75 aa11.03□□□□□ -0.64
PDLIM4-202ENST00000379018 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.65
PDLIM4-202ENST00000379018 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
PDLIM4-202ENST00000379018 RAB5AP20339 215 aa11.02□□□□□ -0.65
PDLIM4-202ENST00000379018 XCL1P47992 114 aa11.02□□□□□ -0.65
PDLIM4-202ENST00000379018 RAB5BP61020 215 aa11.02□□□□□ -0.65
PDLIM4-202ENST00000379018 LYZL1Q6UWQ5 148 aa11.02□□□□□ -0.65
PDLIM4-202ENST00000379018 CARD19Q96LW7 228 aa11.02□□□□□ -0.65
PDLIM4-202ENST00000379018 LINC00474Q9P2X8 69 aa11.02□□□□□ -0.65
PDLIM4-202ENST00000379018 BTF3L4Q96K17 158 aa11.01□□□□□ -0.65
PDLIM4-202ENST00000379018 IMMP2LQ96T52 175 aa11.01□□□□□ -0.65
PDLIM4-202ENST00000379018 C1orf196B1AJZ1 125 aa11□□□□□ -0.65
PDLIM4-202ENST00000379018 NTF3P20783 257 aa11□□□□□ -0.65
PDLIM4-202ENST00000379018 RPL23P62829 140 aaKnown RBP11□□□□□ -0.65
PDLIM4-202ENST00000379018 FOXI1Q12951 378 aa11□□□□□ -0.65
PDLIM4-202ENST00000379018 BIN3Q9NQY0 253 aa11□□□□□ -0.65
PDLIM4-202ENST00000379018 XKRY2A2RUG3 117 aa10.99□□□□□ -0.65
PDLIM4-202ENST00000379018 PPP1R2P9O14990 202 aa10.99□□□□□ -0.65
PDLIM4-202ENST00000379018 SRSF9Q13242 221 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDLIM4-202ENST00000379018 LPAP08519 4548 aa10.98□□□□□ -0.65
PDLIM4-202ENST00000379018 F2Z2F3 143 aa10.98□□□□□ -0.65
PDLIM4-202ENST00000379018 APCSP02743 223 aa10.98□□□□□ -0.65
PDLIM4-202ENST00000379018 FGF6P10767 208 aa10.98□□□□□ -0.65
PDLIM4-202ENST00000379018 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
PDLIM4-202ENST00000379018 TWIST1Q15672 202 aa10.98□□□□□ -0.65
PDLIM4-202ENST00000379018 RPL39LQ96EH5 51 aaKnown RBP10.98□□□□□ -0.65
PDLIM4-202ENST00000379018 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
PDLIM4-202ENST00000379018 C19orf71A6NCJ1 209 aa10.97□□□□□ -0.65
PDLIM4-202ENST00000379018 CCL25O15444 150 aa10.97□□□□□ -0.65
PDLIM4-202ENST00000379018 GNG4P50150 75 aa10.97□□□□□ -0.65
PDLIM4-202ENST00000379018 LINC01551Q86U37 167 aa10.97□□□□□ -0.65
PDLIM4-202ENST00000379018 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
PDLIM4-202ENST00000379018 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
PDLIM4-202ENST00000379018 TRAV9-1A0A075B6T8 112 aa10.96□□□□□ -0.65
PDLIM4-202ENST00000379018 IGHV1-58A0A0C4DH39 117 aa10.96□□□□□ -0.65
PDLIM4-202ENST00000379018 CEBPGP53567 150 aa10.96□□□□□ -0.65
PDLIM4-202ENST00000379018 FAM231BA6NCW3 169 aa10.95□□□□□ -0.66
PDLIM4-202ENST00000379018 ZNF561-AS1K7EIQ3 104 aa10.95□□□□□ -0.66
PDLIM4-202ENST00000379018 SMIM12Q96EX1 92 aa10.95□□□□□ -0.66
PDLIM4-202ENST00000379018 C5orf52A6NGY3 159 aa10.94□□□□□ -0.66
PDLIM4-202ENST00000379018 SYCNQ0VAF6 134 aa10.94□□□□□ -0.66
PDLIM4-202ENST00000379018 ADIRFQ15847 76 aa10.94□□□□□ -0.66
PDLIM4-202ENST00000379018 OR5A1Q8NGJ0 315 aa10.94□□□□□ -0.66
PDLIM4-202ENST00000379018 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
PDLIM4-202ENST00000379018 MT-ND6P03923 174 aa10.93□□□□□ -0.66
PDLIM4-202ENST00000379018 S100PP25815 95 aa10.93□□□□□ -0.66
PDLIM4-202ENST00000379018 PTTG1IPP53801 180 aa10.93□□□□□ -0.66
PDLIM4-202ENST00000379018 LINC00959A0A1B0GUT2 108 aa10.92□□□□□ -0.66
PDLIM4-202ENST00000379018 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
PDLIM4-202ENST00000379018 NCR2O95944 276 aa10.92□□□□□ -0.66
PDLIM4-202ENST00000379018 CTRLP40313 264 aa10.92□□□□□ -0.66
PDLIM4-202ENST00000379018 TRBV20OR9-2A0A075B6H5 130 aa10.91□□□□□ -0.66
PDLIM4-202ENST00000379018 H7C423 109 aa10.91□□□□□ -0.66
PDLIM4-202ENST00000379018 FOXA3P55318 350 aaPredicted RBP10.91□□□□□ -0.66
PDLIM4-202ENST00000379018 LOC107984640A0A0U1RRK4 108 aa10.9□□□□□ -0.66
PDLIM4-202ENST00000379018 A0A1W2PNN7 141 aa10.9□□□□□ -0.66
PDLIM4-202ENST00000379018 ZNF25P17030 456 aaPredicted RBP10.9□□□□□ -0.66
PDLIM4-202ENST00000379018 PMCHP20382 165 aa10.9□□□□□ -0.66
PDLIM4-202ENST00000379018 CAMPP49913 170 aa10.9□□□□□ -0.66
PDLIM4-202ENST00000379018 SS18Q15532 418 aa10.9□□□□□ -0.66
PDLIM4-202ENST00000379018 C1orf137Q5JT78 98 aa10.9□□□□□ -0.66
PDLIM4-202ENST00000379018 PSORS1C2Q9UIG4 136 aa10.9□□□□□ -0.66
PDLIM4-202ENST00000379018 S100A8P05109 93 aa10.89□□□□□ -0.67
PDLIM4-202ENST00000379018 RPL18AQ02543 176 aaKnown RBP10.89□□□□□ -0.67
PDLIM4-202ENST00000379018 SMIM15Q7Z3B0 74 aa10.89□□□□□ -0.67
PDLIM4-202ENST00000379018 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
PDLIM4-202ENST00000379018 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
PDLIM4-202ENST00000379018 IGLV4-69A0A075B6H9 119 aa10.88□□□□□ -0.67
PDLIM4-202ENST00000379018 S100A6P06703 90 aa10.88□□□□□ -0.67
PDLIM4-202ENST00000379018 MALP21145 153 aa10.88□□□□□ -0.67
PDLIM4-202ENST00000379018 PRR26Q8N8Z3 221 aa10.88□□□□□ -0.67
PDLIM4-202ENST00000379018 RNASE7Q9H1E1 156 aaKnown RBP10.88□□□□□ -0.67
PDLIM4-202ENST00000379018 OSTCQ9NRP0 149 aa10.88□□□□□ -0.67
PDLIM4-202ENST00000379018 TGIF2-C20orf24A0A0A6YYL0 155 aa10.87□□□□□ -0.67
PDLIM4-202ENST00000379018 I3L3M4 83 aa10.87□□□□□ -0.67
PDLIM4-202ENST00000379018 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
PDLIM4-202ENST00000379018 CD164L2Q6UWJ8 174 aa10.87□□□□□ -0.67
PDLIM4-202ENST00000379018 FAM231DQ6ZW35 169 aa10.87□□□□□ -0.67
PDLIM4-202ENST00000379018 PHF5AQ7RTV0 110 aaKnown RBP10.87□□□□□ -0.67
PDLIM4-202ENST00000379018 ZNF664Q8N3J9 261 aa10.87□□□□□ -0.67
PDLIM4-202ENST00000379018 RPP21Q9H633 154 aaKnown RBP10.87□□□□□ -0.67
PDLIM4-202ENST00000379018 COA6Q5JTJ3 125 aaKnown RBP10.86□□□□□ -0.67
PDLIM4-202ENST00000379018 OCC1Q8TAD7 63 aa10.86□□□□□ -0.67
PDLIM4-202ENST00000379018 MRAP2Q96G30 205 aa10.86□□□□□ -0.67
PDLIM4-202ENST00000379018 CAMK2N2Q96S95 79 aa10.86□□□□□ -0.67
PDLIM4-202ENST00000379018 CNFNQ9BYD5 112 aa10.86□□□□□ -0.67
PDLIM4-202ENST00000379018 COX19Q49B96 90 aa10.85□□□□□ -0.67
PDLIM4-202ENST00000379018 LINC00518Q8N0U6 118 aa10.85□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST1H2BKO60814 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 TSHBP01222 138 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST1H2BJP06899 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST1H2BOP23527 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST1H2BBP33778 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST1H2BDP58876 126 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms