RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 NXPH4O95158 308 aa11.08□□□□□ -0.64
CCHCR1-201ENST00000376266 TMEM101Q96IK0 257 aa11.08□□□□□ -0.64
CCHCR1-201ENST00000376266 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
CCHCR1-201ENST00000376266 FAM74A4Q5TZK3 123 aa11.07□□□□□ -0.64
CCHCR1-201ENST00000376266 IGLV1-40P01703 118 aa11.07□□□□□ -0.64
CCHCR1-201ENST00000376266 PF4V1P10720 104 aa11.07□□□□□ -0.64
CCHCR1-201ENST00000376266 RPL11P62913 178 aaKnown RBP11.07□□□□□ -0.64
CCHCR1-201ENST00000376266 KRTAP24-1Q3LI83 254 aa11.07□□□□□ -0.64
CCHCR1-201ENST00000376266 HIST2H2BDQ6DRA6 164 aa11.07□□□□□ -0.64
CCHCR1-201ENST00000376266 SPXQ9BT56 116 aa11.07□□□□□ -0.64
CCHCR1-201ENST00000376266 TRGV11A0A075B6L2 103 aa11.06□□□□□ -0.64
CCHCR1-201ENST00000376266 FAM236AA0A1B0GUQ0 79 aa11.06□□□□□ -0.64
CCHCR1-201ENST00000376266 FAM236BA0A1B0GV22 79 aa11.06□□□□□ -0.64
CCHCR1-201ENST00000376266 DEFB121Q5J5C9 76 aa11.06□□□□□ -0.64
CCHCR1-201ENST00000376266 IGHV3-30-3P0DP02 117 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 C11orf44Q8N8P7 122 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 IGKV3-7A0A075B6H7 116 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 PSMB8P28062 276 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 PROK1P58294 105 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 NPC2P61916 151 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 KLK9Q2XQG4 91 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 FAM19A4Q96LR4 140 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 KLK9Q9UKQ9 250 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 TENM1Q9UKZ4 2725 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 TRBV6-5A0A0K0K1A5 114 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 LST1O00453 97 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 LITAFQ99732 161 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
CCHCR1-201ENST00000376266 TRAV8-3A0A0A6YYJ7 113 aa11.04□□□□□ -0.64
CCHCR1-201ENST00000376266 ID1P41134 155 aa11.04□□□□□ -0.64
CCHCR1-201ENST00000376266 RHOHQ15669 191 aa11.04□□□□□ -0.64
CCHCR1-201ENST00000376266 NSUN5P1Q3KNT7 163 aa11.04□□□□□ -0.64
CCHCR1-201ENST00000376266 ADAMTSL4-AS1Q5T5F5 129 aa11.04□□□□□ -0.64
CCHCR1-201ENST00000376266 C9orf153Q5TBE3 101 aa11.04□□□□□ -0.64
CCHCR1-201ENST00000376266 I3L3M4 83 aa11.03□□□□□ -0.64
CCHCR1-201ENST00000376266 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
CCHCR1-201ENST00000376266 APRG1Q8IVJ8 170 aa11.03□□□□□ -0.64
CCHCR1-201ENST00000376266 SOCS3O14543 225 aa11.03□□□□□ -0.64
CCHCR1-201ENST00000376266 C20orf203Q8NBC4 194 aa11.03□□□□□ -0.64
CCHCR1-201ENST00000376266 H3BUA1 57 aa11.02□□□□□ -0.65
CCHCR1-201ENST00000376266 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
CCHCR1-201ENST00000376266 TMEM89A2RUT3 159 aa11.02□□□□□ -0.65
CCHCR1-201ENST00000376266 CD28P10747 220 aa11.02□□□□□ -0.65
CCHCR1-201ENST00000376266 KRTAP10-3P60369 221 aa11.02□□□□□ -0.65
CCHCR1-201ENST00000376266 UNQ9165/PRO28630Q6UXU0 137 aa11.02□□□□□ -0.65
CCHCR1-201ENST00000376266 IMUPQ9GZP8 106 aa11.02□□□□□ -0.65
CCHCR1-201ENST00000376266 IGHV3-11P01762 117 aa11.01□□□□□ -0.65
CCHCR1-201ENST00000376266 CEMP1Q6PRD7 247 aaPredicted RBP11.01□□□□□ -0.65
CCHCR1-201ENST00000376266 SPANXDQ9BXN6 97 aa11.01□□□□□ -0.65
CCHCR1-201ENST00000376266 SPANXCQ9NY87 97 aa11.01□□□□□ -0.65
CCHCR1-201ENST00000376266 C3orf22Q8N5N4 141 aa11.01□□□□□ -0.65
CCHCR1-201ENST00000376266 RNF152Q8N8N0 203 aa11.01□□□□□ -0.65
CCHCR1-201ENST00000376266 NDUFA12Q9UI09 145 aa11.01□□□□□ -0.65
CCHCR1-201ENST00000376266 COL6A5A8TX70 2615 aa11.01□□□□□ -0.65
CCHCR1-201ENST00000376266 FAM223BA6NKX1 122 aa11□□□□□ -0.65
CCHCR1-201ENST00000376266 M0QY20 66 aa11□□□□□ -0.65
CCHCR1-201ENST00000376266 MIAQ16674 131 aa11□□□□□ -0.65
CCHCR1-201ENST00000376266 KHDC1LQ5JSQ8 128 aa11□□□□□ -0.65
CCHCR1-201ENST00000376266 FAM223AQ8IWN6 122 aa11□□□□□ -0.65
CCHCR1-201ENST00000376266 DNAJC30Q96LL9 226 aa11□□□□□ -0.65
CCHCR1-201ENST00000376266 ACYP1P07311 99 aa11□□□□□ -0.65
CCHCR1-201ENST00000376266 C18orf65Q6ZTR6 163 aa10.99□□□□□ -0.65
CCHCR1-201ENST00000376266 CITED2Q99967 270 aaPredicted RBP10.99□□□□□ -0.65
CCHCR1-201ENST00000376266 TRAV12-3A0A0B4J271 114 aa10.99□□□□□ -0.65
CCHCR1-201ENST00000376266 TMEM61Q8N0U2 210 aa10.99□□□□□ -0.65
CCHCR1-201ENST00000376266 USMG5Q96IX5 58 aa10.99□□□□□ -0.65
CCHCR1-201ENST00000376266 TRBV12-3P01733 135 aa10.98□□□□□ -0.65
CCHCR1-201ENST00000376266 UBE2E2Q96LR5 201 aa10.98□□□□□ -0.65
CCHCR1-201ENST00000376266 IGHV1-58A0A0C4DH39 117 aa10.97□□□□□ -0.65
CCHCR1-201ENST00000376266 A0A1W2PRX2 142 aa10.97□□□□□ -0.65
CCHCR1-201ENST00000376266 KLLNB2CW77 178 aa10.97□□□□□ -0.65
CCHCR1-201ENST00000376266 UQCRQO14949 82 aa10.97□□□□□ -0.65
CCHCR1-201ENST00000376266 CSDC2Q9Y534 153 aaKnown RBP10.97□□□□□ -0.65
CCHCR1-201ENST00000376266 LOC107984640A0A0U1RRK4 108 aa10.96□□□□□ -0.65
CCHCR1-201ENST00000376266 A8MZ25 164 aa10.96□□□□□ -0.65
CCHCR1-201ENST00000376266 HERVK_113P63121 156 aa10.96□□□□□ -0.65
CCHCR1-201ENST00000376266 STAB1Q9NY15 2570 aa10.96□□□□□ -0.65
CCHCR1-201ENST00000376266 NDUFA4O00483 81 aa10.96□□□□□ -0.66
CCHCR1-201ENST00000376266 LINC00643Q86TS7 51 aa10.96□□□□□ -0.66
CCHCR1-201ENST00000376266 MRPS36P82909 103 aaKnown RBP10.95□□□□□ -0.66
CCHCR1-201ENST00000376266 DEFB136Q30KP8 78 aa10.95□□□□□ -0.66
CCHCR1-201ENST00000376266 SMCR5Q8TEV8 140 aa10.95□□□□□ -0.66
CCHCR1-201ENST00000376266 RNASE13Q5GAN3 156 aaKnown RBP10.95□□□□□ -0.66
CCHCR1-201ENST00000376266 DAND5Q8N907 189 aa10.94□□□□□ -0.66
CCHCR1-201ENST00000376266 DCANP1Q8TF63 244 aa10.94□□□□□ -0.66
CCHCR1-201ENST00000376266 LINC00526Q96FQ7 95 aa10.94□□□□□ -0.66
CCHCR1-201ENST00000376266 VSIG2Q96IQ7 327 aa10.94□□□□□ -0.66
CCHCR1-201ENST00000376266 IGHV3-16A0A0C4DH30 117 aa10.93□□□□□ -0.66
CCHCR1-201ENST00000376266 C9orf85Q96MD7 179 aa10.93□□□□□ -0.66
CCHCR1-201ENST00000376266 RHPN1-AS1Q9BWJ2 59 aa10.93□□□□□ -0.66
CCHCR1-201ENST00000376266 C4orf3Q8WVX3 66 aa10.93□□□□□ -0.66
CCHCR1-201ENST00000376266 KLK5Q9Y337 293 aaPredicted RBP10.93□□□□□ -0.66
CCHCR1-201ENST00000376266 MDFIQ99750 246 aa10.92□□□□□ -0.66
CCHCR1-201ENST00000376266 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
CCHCR1-201ENST00000376266 C5orf47Q569G3 176 aa10.91□□□□□ -0.66
CCHCR1-201ENST00000376266 J3KT08 172 aa10.91□□□□□ -0.66
CCHCR1-201ENST00000376266 ATP5G1P05496 136 aa10.91□□□□□ -0.66
CCHCR1-201ENST00000376266 FAM104AQ969W3 186 aa10.9□□□□□ -0.66
CCHCR1-201ENST00000376266 WNK1Q9H4A3 2382 aa10.9□□□□□ -0.66
CCHCR1-201ENST00000376266 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms