RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.04□□□□□ -1.12
LSM2-208ENST00000375661 LOC389332A0A1B0GUA5 103 aa8.04□□□□□ -1.12
LSM2-208ENST00000375661 IGKV2-29A2NJV5 120 aaPredicted RBP8.04□□□□□ -1.12
LSM2-208ENST00000375661 SCO1O75880 301 aa8.04□□□□□ -1.12
LSM2-208ENST00000375661 RBX1P62877 108 aa8.04□□□□□ -1.12
LSM2-208ENST00000375661 KIR2DL4Q99706 377 aa8.04□□□□□ -1.12
LSM2-208ENST00000375661 ALKBH7Q9BT30 221 aaPredicted RBP8.04□□□□□ -1.12
LSM2-208ENST00000375661 TCAPO15273 167 aa8.03□□□□□ -1.12
LSM2-208ENST00000375661 PKIAP61925 76 aa8.03□□□□□ -1.12
LSM2-208ENST00000375661 LAGE3Q14657 143 aa8.03□□□□□ -1.12
LSM2-208ENST00000375661 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
LSM2-208ENST00000375661 C20orf203Q8NBC4 194 aa8.03□□□□□ -1.12
LSM2-208ENST00000375661 TM2D2Q9BX73 214 aa8.03□□□□□ -1.12
LSM2-208ENST00000375661 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
LSM2-208ENST00000375661 KLK12Q9UKR0 248 aa8.03□□□□□ -1.12
LSM2-208ENST00000375661 IGLV4-60A0A075B6I1 120 aa8.02□□□□□ -1.13
LSM2-208ENST00000375661 A0A1B0GUV1 79 aa8.02□□□□□ -1.13
LSM2-208ENST00000375661 COLCA2A8K830 154 aa8.02□□□□□ -1.13
LSM2-208ENST00000375661 H7C423 109 aa8.02□□□□□ -1.13
LSM2-208ENST00000375661 UBE2L6O14933 153 aa8.02□□□□□ -1.13
LSM2-208ENST00000375661 ATP6V1G1O75348 118 aa8.02□□□□□ -1.13
LSM2-208ENST00000375661 FCER1GP30273 86 aa8.02□□□□□ -1.13
LSM2-208ENST00000375661 Q8N8P6 123 aa8.02□□□□□ -1.13
LSM2-208ENST00000375661 FGF6P10767 208 aa8.01□□□□□ -1.13
LSM2-208ENST00000375661 IFI27P40305 119 aaPredicted RBP8.01□□□□□ -1.13
LSM2-208ENST00000375661 Q9HAA7 133 aa8.01□□□□□ -1.13
LSM2-208ENST00000375661 OXTP01178 125 aa8□□□□□ -1.13
LSM2-208ENST00000375661 ANGP03950 147 aaKnown RBP8□□□□□ -1.13
LSM2-208ENST00000375661 ENHOQ6UWT2 76 aa8□□□□□ -1.13
LSM2-208ENST00000375661 S100A1P23297 94 aa7.99□□□□□ -1.13
LSM2-208ENST00000375661 AMMECR1LQ6DCA0 310 aa7.99□□□□□ -1.13
LSM2-208ENST00000375661 MRPL52Q86TS9 123 aaKnown RBP7.99□□□□□ -1.13
LSM2-208ENST00000375661 LINC00269Q8N2A0 174 aa7.99□□□□□ -1.13
LSM2-208ENST00000375661 UBE2WQ96B02 151 aa7.99□□□□□ -1.13
LSM2-208ENST00000375661 NXT2Q9NPJ8 142 aaKnown RBP7.99□□□□□ -1.13
LSM2-208ENST00000375661 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
LSM2-208ENST00000375661 TRAV8-3A0A0A6YYJ7 113 aa7.98□□□□□ -1.13
LSM2-208ENST00000375661 RAB5AP20339 215 aa7.98□□□□□ -1.13
LSM2-208ENST00000375661 RPL39P62891 51 aaKnown RBP7.98□□□□□ -1.13
LSM2-208ENST00000375661 RNASEKQ6P5S7 137 aaKnown RBP7.98□□□□□ -1.13
LSM2-208ENST00000375661 C18orf32Q8TCD1 76 aa7.98□□□□□ -1.13
LSM2-208ENST00000375661 UBE2D4Q9Y2X8 147 aa7.98□□□□□ -1.13
LSM2-208ENST00000375661 TRGC2P03986 189 aa7.97□□□□□ -1.13
LSM2-208ENST00000375661 ZNF25P17030 456 aaPredicted RBP7.97□□□□□ -1.13
LSM2-208ENST00000375661 REG3AQ06141 175 aa7.97□□□□□ -1.13
LSM2-208ENST00000375661 CLPSL2Q6UWE3 100 aa7.97□□□□□ -1.13
LSM2-208ENST00000375661 PRSS3P2Q8NHM4 247 aa7.97□□□□□ -1.13
LSM2-208ENST00000375661 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
LSM2-208ENST00000375661 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
LSM2-208ENST00000375661 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
LSM2-208ENST00000375661 DNAH8Q96JB1 4490 aa7.97□□□□□ -1.13
LSM2-208ENST00000375661 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 K7EMI3 77 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 CRPP02741 224 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 Q0VG73 95 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 WFDC2Q14508 124 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 ORMDL2Q53FV1 153 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 OR5A1Q8NGJ0 315 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 FAM104AQ969W3 186 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 TMEM18Q96B42 140 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 TIMM21Q9BVV7 248 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 CSDC2Q9Y534 153 aaKnown RBP7.96□□□□□ -1.14
LSM2-208ENST00000375661 COX11Q9Y6N1 276 aa7.96□□□□□ -1.14
LSM2-208ENST00000375661 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
LSM2-208ENST00000375661 MIAQ16674 131 aa7.95□□□□□ -1.14
LSM2-208ENST00000375661 SCXQ7RTU7 201 aa7.95□□□□□ -1.14
LSM2-208ENST00000375661 ZNF664Q8N3J9 261 aa7.95□□□□□ -1.14
LSM2-208ENST00000375661 TMEM101Q96IK0 257 aa7.95□□□□□ -1.14
LSM2-208ENST00000375661 IGKV2D-24A0A075B6R9 120 aa7.94□□□□□ -1.14
LSM2-208ENST00000375661 KRTAP26-1Q6PEX3 210 aa7.94□□□□□ -1.14
LSM2-208ENST00000375661 C2orf66Q6UXQ4 117 aa7.94□□□□□ -1.14
LSM2-208ENST00000375661 CHAC1Q9BUX1 264 aa7.94□□□□□ -1.14
LSM2-208ENST00000375661 IGLV10-54A0A075B6I4 117 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.93□□□□□ -1.14
LSM2-208ENST00000375661 IGKV3OR2-268A0A0C4DH90 116 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 SMAGPQ0VAQ4 97 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 DGAT2L7PQ6IED9 249 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 Q6ZUT4 128 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 FA2HQ7L5A8 372 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 RMI2Q96E14 147 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 OPRPNQ99935 248 aaPredicted RBP7.93□□□□□ -1.14
LSM2-208ENST00000375661 C1orf43Q9BWL3 253 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 SPANXA1Q9NS26 97 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 CYSLTR1Q9Y271 337 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 PYGO1Q9Y3Y4 419 aa7.93□□□□□ -1.14
LSM2-208ENST00000375661 LINC00614P0C842 121 aa7.92□□□□□ -1.14
LSM2-208ENST00000375661 MRPS36P82909 103 aaKnown RBP7.92□□□□□ -1.14
LSM2-208ENST00000375661 RNASE13Q5GAN3 156 aaKnown RBP7.92□□□□□ -1.14
LSM2-208ENST00000375661 A0A096LNJ9 63 aa7.91□□□□□ -1.14
LSM2-208ENST00000375661 TRAV8-4A0A0B4J246 113 aa7.91□□□□□ -1.14
LSM2-208ENST00000375661 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
LSM2-208ENST00000375661 IGIPA6NJ69 53 aa7.91□□□□□ -1.14
LSM2-208ENST00000375661 LECT2O14960 151 aa7.91□□□□□ -1.14
LSM2-208ENST00000375661 TOMM6Q96B49 74 aa7.91□□□□□ -1.14
LSM2-208ENST00000375661 AP5S1Q9NUS5 200 aa7.91□□□□□ -1.14
LSM2-208ENST00000375661 HMCN2Q8NDA2 5059 aa7.9□□□□□ -1.14
LSM2-208ENST00000375661 IGLV4-3A0A075B6K6 122 aa7.9□□□□□ -1.14
LSM2-208ENST00000375661 G0S2P27469 103 aa7.9□□□□□ -1.14
LSM2-208ENST00000375661 RAB5BP61020 215 aa7.9□□□□□ -1.14
LSM2-208ENST00000375661 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms