RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 DEFB114Q30KQ6 69 aa10.57□□□□□ -0.72
LMX1B-202ENST00000373474 HIGD2AQ9BW72 106 aa10.57□□□□□ -0.72
LMX1B-202ENST00000373474 VPREB1P12018 145 aa10.56□□□□□ -0.72
LMX1B-202ENST00000373474 IGHV4-31P0DP07 118 aa10.56□□□□□ -0.72
LMX1B-202ENST00000373474 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
LMX1B-202ENST00000373474 ZGRF1Q86YA3 2104 aa10.56□□□□□ -0.72
LMX1B-202ENST00000373474 LRP4O75096 1905 aa10.55□□□□□ -0.72
LMX1B-202ENST00000373474 PYGO1Q9Y3Y4 419 aa10.55□□□□□ -0.72
LMX1B-202ENST00000373474 FREM1Q5H8C1 2179 aa10.55□□□□□ -0.72
LMX1B-202ENST00000373474 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
LMX1B-202ENST00000373474 FAM19A1Q7Z5A9 133 aa10.54□□□□□ -0.72
LMX1B-202ENST00000373474 SPTBN1Q01082 2364 aaKnown RBP10.54□□□□□ -0.72
LMX1B-202ENST00000373474 WNK2Q9Y3S1 2297 aa10.54□□□□□ -0.72
LMX1B-202ENST00000373474 C6orf99Q4VX62 202 aa10.54□□□□□ -0.72
LMX1B-202ENST00000373474 LINC00269Q8N2A0 174 aa10.53□□□□□ -0.72
LMX1B-202ENST00000373474 PRO3102Q9H379 93 aa10.53□□□□□ -0.72
LMX1B-202ENST00000373474 GVINP1Q7Z2Y8 2422 aa10.53□□□□□ -0.72
LMX1B-202ENST00000373474 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
LMX1B-202ENST00000373474 DHRS4-AS1Q9P1J3 65 aa10.52□□□□□ -0.72
LMX1B-202ENST00000373474 TSHBP01222 138 aa10.52□□□□□ -0.72
LMX1B-202ENST00000373474 PRR9Q5T870 116 aa10.52□□□□□ -0.72
LMX1B-202ENST00000373474 C11orf21Q9P2W6 132 aa10.52□□□□□ -0.72
LMX1B-202ENST00000373474 KIAA1549Q9HCM3 1950 aa10.52□□□□□ -0.73
LMX1B-202ENST00000373474 C1orf158Q8N1D5 194 aa10.52□□□□□ -0.73
LMX1B-202ENST00000373474 DOPEY2Q9Y3R5 2298 aa10.52□□□□□ -0.73
LMX1B-202ENST00000373474 LINC00310P59036 64 aa10.51□□□□□ -0.73
LMX1B-202ENST00000373474 PROK1P58294 105 aa10.51□□□□□ -0.73
LMX1B-202ENST00000373474 MED12LQ86YW9 2145 aa10.51□□□□□ -0.73
LMX1B-202ENST00000373474 Q8N976 141 aa10.5□□□□□ -0.73
LMX1B-202ENST00000373474 C3orf84H3BNL1 204 aa10.5□□□□□ -0.73
LMX1B-202ENST00000373474 WFDC10AQ9H1F0 79 aa10.5□□□□□ -0.73
LMX1B-202ENST00000373474 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
LMX1B-202ENST00000373474 WFDC13Q8IUB5 93 aa10.49□□□□□ -0.73
LMX1B-202ENST00000373474 KLK5Q9Y337 293 aaPredicted RBP10.49□□□□□ -0.73
LMX1B-202ENST00000373474 PCNX2A6NKB5 2137 aa10.49□□□□□ -0.73
LMX1B-202ENST00000373474 KLLNB2CW77 178 aa10.49□□□□□ -0.73
LMX1B-202ENST00000373474 CNFNQ9BYD5 112 aa10.49□□□□□ -0.73
LMX1B-202ENST00000373474 PTPRSQ13332 1948 aa10.48□□□□□ -0.73
LMX1B-202ENST00000373474 TRBV6-4A0A1B0GX49 114 aa10.48□□□□□ -0.73
LMX1B-202ENST00000373474 TRBV6-8A0A0A6YYG3 113 aa10.48□□□□□ -0.73
LMX1B-202ENST00000373474 PRR4Q16378 134 aa10.48□□□□□ -0.73
LMX1B-202ENST00000373474 FAM19A5Q7Z5A7 132 aaPredicted RBP10.48□□□□□ -0.73
LMX1B-202ENST00000373474 MUC7Q8TAX7 377 aa10.48□□□□□ -0.73
LMX1B-202ENST00000373474 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.48□□□□□ -0.73
LMX1B-202ENST00000373474 C10orf99Q6UWK7 81 aa10.47□□□□□ -0.73
LMX1B-202ENST00000373474 Q6ZQY7 126 aa10.47□□□□□ -0.73
LMX1B-202ENST00000373474 GAS8-AS1O95177 125 aa10.47□□□□□ -0.73
LMX1B-202ENST00000373474 A0A0J9YWU9 116 aa10.47□□□□□ -0.73
LMX1B-202ENST00000373474 COL5A1P20908 1838 aaPredicted RBP10.47□□□□□ -0.73
LMX1B-202ENST00000373474 M0R378 163 aa10.46□□□□□ -0.73
LMX1B-202ENST00000373474 URB1-AS1Q96HZ7 61 aa10.46□□□□□ -0.73
LMX1B-202ENST00000373474 FAM30AQ9NZY2 134 aa10.46□□□□□ -0.73
LMX1B-202ENST00000373474 IGKV2-24A0A0C4DH68 120 aa10.46□□□□□ -0.73
LMX1B-202ENST00000373474 UBE2D2P62837 147 aa10.46□□□□□ -0.73
LMX1B-202ENST00000373474 POLR2KP53803 58 aaKnown RBP10.46□□□□□ -0.73
LMX1B-202ENST00000373474 PSMG3-AS1Q96PY0 264 aa10.46□□□□□ -0.73
LMX1B-202ENST00000373474 ZNF702PQ9H963 129 aa10.46□□□□□ -0.73
LMX1B-202ENST00000373474 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.73
LMX1B-202ENST00000373474 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.74
LMX1B-202ENST00000373474 IGLV1-40P01703 118 aa10.45□□□□□ -0.74
LMX1B-202ENST00000373474 PRYO14603 147 aa10.45□□□□□ -0.74
LMX1B-202ENST00000373474 ZNF706Q9Y5V0 76 aaPredicted RBP10.45□□□□□ -0.74
LMX1B-202ENST00000373474 COX17Q14061 63 aa10.44□□□□□ -0.74
LMX1B-202ENST00000373474 TECTAO75443 2155 aa10.44□□□□□ -0.74
LMX1B-202ENST00000373474 Q6ZSV7 163 aa10.44□□□□□ -0.74
LMX1B-202ENST00000373474 CSDC2Q9Y534 153 aaKnown RBP10.44□□□□□ -0.74
LMX1B-202ENST00000373474 A8MZ25 164 aa10.44□□□□□ -0.74
LMX1B-202ENST00000373474 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
LMX1B-202ENST00000373474 A0A096LNI7 61 aa10.43□□□□□ -0.74
LMX1B-202ENST00000373474 CPAMD8Q8IZJ3 1885 aa10.43□□□□□ -0.74
LMX1B-202ENST00000373474 CRYGDP07320 174 aa10.43□□□□□ -0.74
LMX1B-202ENST00000373474 DCANP1Q8TF63 244 aa10.43□□□□□ -0.74
LMX1B-202ENST00000373474 A0A087WZ39 114 aa10.42□□□□□ -0.74
LMX1B-202ENST00000373474 UBE2D1P51668 147 aa10.42□□□□□ -0.74
LMX1B-202ENST00000373474 Q6ZS46 218 aa10.42□□□□□ -0.74
LMX1B-202ENST00000373474 SPTBN2O15020 2390 aa10.42□□□□□ -0.74
LMX1B-202ENST00000373474 C11orf45Q8TAV5 145 aa10.42□□□□□ -0.74
LMX1B-202ENST00000373474 SYCNQ0VAF6 134 aa10.41□□□□□ -0.74
LMX1B-202ENST00000373474 NTM-AS1Q6ZSK4 140 aa10.41□□□□□ -0.74
LMX1B-202ENST00000373474 XAGE1AQ9HD64 81 aa10.4□□□□□ -0.74
LMX1B-202ENST00000373474 PCNX1Q96RV3 2341 aa10.4□□□□□ -0.74
LMX1B-202ENST00000373474 CD164L2Q6UWJ8 174 aa10.4□□□□□ -0.74
LMX1B-202ENST00000373474 HCFC1P51610 2035 aa10.4□□□□□ -0.74
LMX1B-202ENST00000373474 IGIPA6NJ69 53 aa10.39□□□□□ -0.75
LMX1B-202ENST00000373474 IL17DQ8TAD2 202 aa10.39□□□□□ -0.75
LMX1B-202ENST00000373474 PRO0628Q9UI54 55 aa10.39□□□□□ -0.75
LMX1B-202ENST00000373474 CACNA1BQ00975 2339 aa10.39□□□□□ -0.75
LMX1B-202ENST00000373474 TRBV7-7A0A0K0K1E9 115 aa10.37□□□□□ -0.75
LMX1B-202ENST00000373474 ZNF73O43830 326 aaPredicted RBP10.37□□□□□ -0.75
LMX1B-202ENST00000373474 C18orf65Q6ZTR6 163 aa10.37□□□□□ -0.75
LMX1B-202ENST00000373474 COX8CQ7Z4L0 72 aa10.36□□□□□ -0.75
LMX1B-202ENST00000373474 BBC3Q96PG8 261 aaPredicted RBP10.36□□□□□ -0.75
LMX1B-202ENST00000373474 LINC00208Q96KT6 92 aa10.35□□□□□ -0.75
LMX1B-202ENST00000373474 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
LMX1B-202ENST00000373474 LINC00959A0A1B0GUT2 108 aa10.35□□□□□ -0.75
LMX1B-202ENST00000373474 LRCOL1A6NCL2 159 aa10.35□□□□□ -0.75
LMX1B-202ENST00000373474 LOC100131303A0A0U1RQF7 123 aa10.35□□□□□ -0.75
LMX1B-202ENST00000373474 CELA1Q9UNI1 258 aa10.35□□□□□ -0.75
LMX1B-202ENST00000373474 RIF1Q5UIP0 2472 aaKnown RBP10.35□□□□□ -0.75
LMX1B-202ENST00000373474 LOC107984640A0A0U1RRK4 108 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms