RNA–Protein interactions for RNA: ENST00000370940.5

HHLA3-203, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-203ENST00000370940 LINC01561Q8N1V8 128 aa4.65□□□□□ -1.67
HHLA3-203ENST00000370940 HIST1H2BAQ96A08 127 aa4.65□□□□□ -1.67
HHLA3-203ENST00000370940 FMC1Q96HJ9 113 aa4.65□□□□□ -1.67
HHLA3-203ENST00000370940 AQP10Q96PS8 301 aa4.65□□□□□ -1.67
HHLA3-203ENST00000370940 TNFSF18Q9UNG2 199 aa4.65□□□□□ -1.67
HHLA3-203ENST00000370940 IGKV3OR2-268A0A0C4DH90 116 aa4.64□□□□□ -1.67
HHLA3-203ENST00000370940 H7C1H1 209 aa4.64□□□□□ -1.67
HHLA3-203ENST00000370940 M0QY20 66 aa4.64□□□□□ -1.67
HHLA3-203ENST00000370940 SULT1A2P50226 295 aa4.64□□□□□ -1.67
HHLA3-203ENST00000370940 NKX2-5P52952 324 aaPredicted RBP4.64□□□□□ -1.67
HHLA3-203ENST00000370940 SERF2P84101 59 aa4.64□□□□□ -1.67
HHLA3-203ENST00000370940 SPANXN1Q5VSR9 72 aa4.64□□□□□ -1.67
HHLA3-203ENST00000370940 LITAFQ99732 161 aa4.64□□□□□ -1.67
HHLA3-203ENST00000370940 TMEM243Q9BU79 118 aa4.64□□□□□ -1.67
HHLA3-203ENST00000370940 CTXND1A0A1B0GTU2 59 aa4.63□□□□□ -1.67
HHLA3-203ENST00000370940 PCP4L1A6NKN8 68 aa4.63□□□□□ -1.67
HHLA3-203ENST00000370940 SNAI2O43623 268 aa4.63□□□□□ -1.67
HHLA3-203ENST00000370940 MGPP08493 103 aa4.63□□□□□ -1.67
HHLA3-203ENST00000370940 GZMBP10144 247 aa4.63□□□□□ -1.67
HHLA3-203ENST00000370940 Q5BKY6 102 aa4.63□□□□□ -1.67
HHLA3-203ENST00000370940 RPL7L1Q6DKI1 246 aaKnown RBP4.63□□□□□ -1.67
HHLA3-203ENST00000370940 LINC00526Q96FQ7 95 aa4.63□□□□□ -1.67
HHLA3-203ENST00000370940 MARVELD1Q9BSK0 173 aa4.63□□□□□ -1.67
HHLA3-203ENST00000370940 GVQW2A0A096LPI5 108 aaPredicted RBP4.62□□□□□ -1.67
HHLA3-203ENST00000370940 UPK1BO75841 260 aa4.62□□□□□ -1.67
HHLA3-203ENST00000370940 OR5AL1P0C617 328 aa4.62□□□□□ -1.67
HHLA3-203ENST00000370940 SMIM17P0DL12 118 aa4.62□□□□□ -1.67
HHLA3-203ENST00000370940 AKR1C3P42330 323 aa4.62□□□□□ -1.67
HHLA3-203ENST00000370940 NDUFV3P56181 108 aaKnown RBP4.62□□□□□ -1.67
HHLA3-203ENST00000370940 CHCHD10Q8WYQ3 142 aaPredicted RBP4.62□□□□□ -1.67
HHLA3-203ENST00000370940 NKX6-2Q9C056 277 aaPredicted RBP4.62□□□□□ -1.67
HHLA3-203ENST00000370940 CXCL1P09341 107 aa4.61□□□□□ -1.67
HHLA3-203ENST00000370940 AP1S3Q96PC3 154 aa4.61□□□□□ -1.67
HHLA3-203ENST00000370940 MAP1LC3B2A6NCE7 125 aa4.6□□□□□ -1.67
HHLA3-203ENST00000370940 FAM231BA6NCW3 169 aa4.6□□□□□ -1.67
HHLA3-203ENST00000370940 UBE2L6O14933 153 aa4.6□□□□□ -1.67
HHLA3-203ENST00000370940 C6orf226Q5I0X4 101 aa4.6□□□□□ -1.67
HHLA3-203ENST00000370940 STOML3Q8TAV4 291 aa4.6□□□□□ -1.67
HHLA3-203ENST00000370940 OCR1Q9BZK8 76 aa4.6□□□□□ -1.67
HHLA3-203ENST00000370940 MAP1LC3BQ9GZQ8 125 aa4.6□□□□□ -1.67
HHLA3-203ENST00000370940 A0A1W2PNN7 141 aa4.59□□□□□ -1.67
HHLA3-203ENST00000370940 DEFA1P59665 94 aa4.59□□□□□ -1.67
HHLA3-203ENST00000370940 RASL11AQ6T310 242 aa4.59□□□□□ -1.67
HHLA3-203ENST00000370940 BAGE2Q86Y30 109 aa4.59□□□□□ -1.67
HHLA3-203ENST00000370940 S100ZQ8WXG8 99 aa4.59□□□□□ -1.67
HHLA3-203ENST00000370940 PGLYRP4Q96LB8 373 aa4.59□□□□□ -1.67
HHLA3-203ENST00000370940 LINC00474Q9P2X8 69 aa4.59□□□□□ -1.67
HHLA3-203ENST00000370940 PSORS1C2Q9UIG4 136 aa4.59□□□□□ -1.67
HHLA3-203ENST00000370940 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.68
HHLA3-203ENST00000370940 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.58□□□□□ -1.68
HHLA3-203ENST00000370940 A0A1B0GV50 99 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 IGKV2-29A2NJV5 120 aaPredicted RBP4.58□□□□□ -1.68
HHLA3-203ENST00000370940 IGLC6P0CF74 106 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 CFC1BP0CG36 223 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 CFC1P0CG37 223 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 XCL1P47992 114 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 COTL1Q14019 142 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 AKR1C8PQ5T2L2 129 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 ZNF664Q8N3J9 261 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 CARD19Q96LW7 228 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 TCEAL7Q9BRU2 100 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 NIT2Q9NQR4 276 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 ALG5Q9Y673 324 aa4.58□□□□□ -1.68
HHLA3-203ENST00000370940 BORCS7-ASMTA0A0B4J1R7 106 aa4.57□□□□□ -1.68
HHLA3-203ENST00000370940 CACNG7P62955 275 aa4.57□□□□□ -1.68
HHLA3-203ENST00000370940 PRR4Q16378 134 aa4.57□□□□□ -1.68
HHLA3-203ENST00000370940 RNASEKQ6P5S7 137 aaKnown RBP4.57□□□□□ -1.68
HHLA3-203ENST00000370940 FER1L6-AS1Q8NA97 138 aa4.57□□□□□ -1.68
HHLA3-203ENST00000370940 TRAV26-2A0A0B4J265 109 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 CCL25O15444 150 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 MT-ND6P03923 174 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 BCL2P10415 239 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 FGF6P10767 208 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 NTF3P20783 257 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 C1orf137Q5JT78 98 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 AMMECR1LQ6DCA0 310 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 LINC00299Q6ZSB3 139 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 TMUB2Q71RG4 321 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 PHF5AQ7RTV0 110 aaKnown RBP4.56□□□□□ -1.68
HHLA3-203ENST00000370940 Q8NBF4 154 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 OR2D3Q8NGH3 330 aa4.56□□□□□ -1.68
HHLA3-203ENST00000370940 FXYD6-FXYD2A0A087WZ82 144 aa4.55□□□□□ -1.68
HHLA3-203ENST00000370940 IGHV1-58A0A0C4DH39 117 aa4.55□□□□□ -1.68
HHLA3-203ENST00000370940 S100A9P06702 114 aaKnown RBP4.55□□□□□ -1.68
HHLA3-203ENST00000370940 RPL35P42766 123 aaKnown RBP4.55□□□□□ -1.68
HHLA3-203ENST00000370940 C9orf116Q5BN46 136 aaPredicted RBP4.55□□□□□ -1.68
HHLA3-203ENST00000370940 UQCC3Q6UW78 93 aa4.55□□□□□ -1.68
HHLA3-203ENST00000370940 KRTAP11-1Q8IUC1 163 aa4.55□□□□□ -1.68
HHLA3-203ENST00000370940 GATD1Q8NB37 220 aa4.55□□□□□ -1.68
HHLA3-203ENST00000370940 SFT2D1Q8WV19 159 aa4.55□□□□□ -1.68
HHLA3-203ENST00000370940 RPL39LQ96EH5 51 aaKnown RBP4.55□□□□□ -1.68
HHLA3-203ENST00000370940 CYTL1Q9NRR1 136 aa4.55□□□□□ -1.68
HHLA3-203ENST00000370940 IGLV4-69A0A075B6H9 119 aa4.54□□□□□ -1.68
HHLA3-203ENST00000370940 A0A0U1RQV1 116 aa4.54□□□□□ -1.68
HHLA3-203ENST00000370940 LINC00959A0A1B0GUT2 108 aa4.54□□□□□ -1.68
HHLA3-203ENST00000370940 LYZL1Q6UWQ5 148 aa4.54□□□□□ -1.68
HHLA3-203ENST00000370940 OR5A1Q8NGJ0 315 aa4.54□□□□□ -1.68
HHLA3-203ENST00000370940 MED28Q9H204 178 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms