RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 CITED2Q99967 270 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-201ENST00000369407 SPANXDQ9BXN6 97 aa8.96□□□□□ -0.98
PHGDH-201ENST00000369407 SPANXCQ9NY87 97 aa8.96□□□□□ -0.98
PHGDH-201ENST00000369407 A6NDX4 124 aa8.95□□□□□ -0.98
PHGDH-201ENST00000369407 HIST2H2BDQ6DRA6 164 aa8.95□□□□□ -0.98
PHGDH-201ENST00000369407 Q8N2B8 174 aa8.95□□□□□ -0.98
PHGDH-201ENST00000369407 COX6A2Q02221 97 aa8.94□□□□□ -0.98
PHGDH-201ENST00000369407 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
PHGDH-201ENST00000369407 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
PHGDH-201ENST00000369407 TLN2Q9Y4G6 2542 aa8.94□□□□□ -0.98
PHGDH-201ENST00000369407 K7EQG2 157 aa8.94□□□□□ -0.98
PHGDH-201ENST00000369407 UQCRQO14949 82 aa8.94□□□□□ -0.98
PHGDH-201ENST00000369407 SMCR5Q8TEV8 140 aa8.94□□□□□ -0.98
PHGDH-201ENST00000369407 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
PHGDH-201ENST00000369407 CFAP46Q8IYW2 2715 aa8.93□□□□□ -0.98
PHGDH-201ENST00000369407 Q9H8V8 135 aa8.93□□□□□ -0.98
PHGDH-201ENST00000369407 AVPP01185 164 aa8.93□□□□□ -0.98
PHGDH-201ENST00000369407 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
PHGDH-201ENST00000369407 TINCRA0A1B0GVN0 87 aa8.92□□□□□ -0.98
PHGDH-201ENST00000369407 K7EMT4 169 aa8.92□□□□□ -0.98
PHGDH-201ENST00000369407 H3BUA1 57 aa8.92□□□□□ -0.98
PHGDH-201ENST00000369407 SPANXA1Q9NS26 97 aa8.92□□□□□ -0.98
PHGDH-201ENST00000369407 LRRK2Q5S007 2527 aa8.92□□□□□ -0.98
PHGDH-201ENST00000369407 C1orf43Q9BWL3 253 aa8.91□□□□□ -0.98
PHGDH-201ENST00000369407 IGHV4-59P01825 116 aa8.91□□□□□ -0.98
PHGDH-201ENST00000369407 LINC01600Q96MT4 127 aa8.91□□□□□ -0.98
PHGDH-201ENST00000369407 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
PHGDH-201ENST00000369407 DEFB131AP59861 70 aa8.91□□□□□ -0.98
PHGDH-201ENST00000369407 DGAT2L7PQ6IED9 249 aa8.91□□□□□ -0.98
PHGDH-201ENST00000369407 SOSTDC1Q6X4U4 206 aa8.91□□□□□ -0.98
PHGDH-201ENST00000369407 LINC00308Q8TCZ7 52 aa8.91□□□□□ -0.98
PHGDH-201ENST00000369407 USP9XQ93008 2570 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-201ENST00000369407 IGKV3D-7A0A0C4DH55 119 aa8.9□□□□□ -0.98
PHGDH-201ENST00000369407 TRACP01848 142 aa8.9□□□□□ -0.98
PHGDH-201ENST00000369407 HOXD3P31249 432 aaPredicted RBP8.9□□□□□ -0.98
PHGDH-201ENST00000369407 CFHR3Q02985 330 aa8.9□□□□□ -0.98
PHGDH-201ENST00000369407 DEFB136Q30KP8 78 aa8.9□□□□□ -0.98
PHGDH-201ENST00000369407 C10orf105Q8TEF2 133 aa8.9□□□□□ -0.98
PHGDH-201ENST00000369407 PSMB8P28062 276 aa8.89□□□□□ -0.99
PHGDH-201ENST00000369407 DAZ2Q13117 558 aaKnown RBP8.89□□□□□ -0.99
PHGDH-201ENST00000369407 DAZ4Q86SG3 579 aaKnown RBP8.89□□□□□ -0.99
PHGDH-201ENST00000369407 Q9HAA7 133 aa8.89□□□□□ -0.99
PHGDH-201ENST00000369407 DAZ3Q9NR90 486 aaKnown RBP8.89□□□□□ -0.99
PHGDH-201ENST00000369407 SETD2Q9BYW2 2564 aaPredicted RBP8.89□□□□□ -0.99
PHGDH-201ENST00000369407 SDIM1Q6ZPB5 146 aa8.89□□□□□ -0.99
PHGDH-201ENST00000369407 LRRC75A-AS1Q8N1F1 130 aa8.89□□□□□ -0.99
PHGDH-201ENST00000369407 ABCA12Q86UK0 2595 aa8.89□□□□□ -0.99
PHGDH-201ENST00000369407 RBMY1BA6NDE4 496 aaKnown RBP8.89□□□□□ -0.99
PHGDH-201ENST00000369407 RBMY1EA6NEQ0 496 aaKnown RBP8.89□□□□□ -0.99
PHGDH-201ENST00000369407 RBMY1DP0C7P1 496 aaKnown RBP8.89□□□□□ -0.99
PHGDH-201ENST00000369407 IGHV4-30-2A0A087WSY4 118 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 PIK3CD-AS1Q5SR53 167 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 LINC00526Q96FQ7 95 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 FAM218AQ96MZ4 157 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 TRBV7-7A0A0K0K1E9 115 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 DEFB121Q5J5C9 76 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 C18orf65Q6ZTR6 163 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 PIMREGQ9BSJ6 248 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 MYO9AB2RTY4 2548 aa8.88□□□□□ -0.99
PHGDH-201ENST00000369407 IGHV3OR16-12A0A075B7B8 117 aa8.87□□□□□ -0.99
PHGDH-201ENST00000369407 FAM240AA0A1B0GVK7 77 aa8.87□□□□□ -0.99
PHGDH-201ENST00000369407 A0A1B0GX51 115 aa8.87□□□□□ -0.99
PHGDH-201ENST00000369407 NDUFA1O15239 70 aa8.87□□□□□ -0.99
PHGDH-201ENST00000369407 CIRBPQ14011 172 aaKnown RBP8.87□□□□□ -0.99
PHGDH-201ENST00000369407 MXRA5Q9NR99 2828 aa8.87□□□□□ -0.99
PHGDH-201ENST00000369407 A0A087WVE0 104 aa8.87□□□□□ -0.99
PHGDH-201ENST00000369407 BAALC-AS2P0C853 105 aa8.87□□□□□ -0.99
PHGDH-201ENST00000369407 COX7CP15954 63 aa8.86□□□□□ -0.99
PHGDH-201ENST00000369407 AKAP9Q99996 3911 aa8.86□□□□□ -0.99
PHGDH-201ENST00000369407 COX7A2LO14548 114 aa8.86□□□□□ -0.99
PHGDH-201ENST00000369407 IGHV3-53P01767 116 aa8.86□□□□□ -0.99
PHGDH-201ENST00000369407 PRIMA1Q86XR5 153 aa8.86□□□□□ -0.99
PHGDH-201ENST00000369407 MAPK1IP1LQ8NDC0 245 aa8.86□□□□□ -0.99
PHGDH-201ENST00000369407 LINC00242Q5T6M2 205 aa8.85□□□□□ -0.99
PHGDH-201ENST00000369407 PTPN13Q12923 2485 aa8.85□□□□□ -0.99
PHGDH-201ENST00000369407 WNK1Q9H4A3 2382 aa8.85□□□□□ -0.99
PHGDH-201ENST00000369407 SLURP1P55000 103 aa8.85□□□□□ -0.99
PHGDH-201ENST00000369407 DEFB112Q30KQ8 113 aa8.85□□□□□ -0.99
PHGDH-201ENST00000369407 EPG5Q9HCE0 2579 aa8.85□□□□□ -0.99
PHGDH-201ENST00000369407 OXTP01178 125 aa8.84□□□□□ -0.99
PHGDH-201ENST00000369407 TIRAPP58753 221 aa8.84□□□□□ -0.99
PHGDH-201ENST00000369407 FBN2P35556 2912 aa8.84□□□□□ -0.99
PHGDH-201ENST00000369407 MSMBP08118 114 aa8.83□□□□□ -1
PHGDH-201ENST00000369407 C22orf24Q9Y442 160 aa8.83□□□□□ -1
PHGDH-201ENST00000369407 SONP18583 2426 aaKnown RBP8.83□□□□□ -1
PHGDH-201ENST00000369407 NIPBLQ6KC79 2804 aaeCLIP8.83□□□□□ -1
PHGDH-201ENST00000369407 IGKV3OR2-268A0A0C4DH90 116 aa8.83□□□□□ -1
PHGDH-201ENST00000369407 TIMM17BO60830 172 aa8.83□□□□□ -1
PHGDH-201ENST00000369407 CCDC168Q8NDH2 2452 aa8.83□□□□□ -1
PHGDH-201ENST00000369407 IGSF10Q6WRI0 2623 aa8.83□□□□□ -1
PHGDH-201ENST00000369407 PEMTQ9UBM1 199 aa8.83□□□□□ -1
PHGDH-201ENST00000369407 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
PHGDH-201ENST00000369407 ZNF415Q09FC8 603 aa8.82□□□□□ -1
PHGDH-201ENST00000369407 C9orf129Q5T035 196 aaKnown RBP8.82□□□□□ -1
PHGDH-201ENST00000369407 DPH3Q96FX2 82 aa8.82□□□□□ -1
PHGDH-201ENST00000369407 CCL19Q99731 98 aa8.82□□□□□ -1
PHGDH-201ENST00000369407 HIST1H4AP62805 103 aaKnown RBP8.82□□□□□ -1
PHGDH-201ENST00000369407 LINC00643Q86TS7 51 aa8.82□□□□□ -1
PHGDH-201ENST00000369407 UBE2E2Q96LR5 201 aa8.82□□□□□ -1
PHGDH-201ENST00000369407 XCL2Q9UBD3 114 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms