RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
CHTOP-202ENST00000368687 PRELID3AQ96N28 172 aa12.17□□□□□ -0.46
CHTOP-202ENST00000368687 KRTAP4-5Q9BYR2 181 aa12.17□□□□□ -0.46
CHTOP-202ENST00000368687 APOBP04114 4563 aaKnown RBP12.17□□□□□ -0.46
CHTOP-202ENST00000368687 IGLV10-54A0A075B6I4 117 aa12.16□□□□□ -0.46
CHTOP-202ENST00000368687 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.16□□□□□ -0.46
CHTOP-202ENST00000368687 USP17L23D6RBM5 183 aa12.16□□□□□ -0.46
CHTOP-202ENST00000368687 NPYP01303 97 aa12.16□□□□□ -0.46
CHTOP-202ENST00000368687 FUSP35637 526 aaKnown RBP eCLIP12.16□□□□□ -0.461e-8■■■□□ 16.9
CHTOP-202ENST00000368687 KRTAP26-1Q6PEX3 210 aa12.16□□□□□ -0.46
CHTOP-202ENST00000368687 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
CHTOP-202ENST00000368687 NDUFA5Q16718 116 aa12.15□□□□□ -0.46
CHTOP-202ENST00000368687 TIMM21Q9BVV7 248 aa12.15□□□□□ -0.46
CHTOP-202ENST00000368687 CCL25O15444 150 aa12.14□□□□□ -0.47
CHTOP-202ENST00000368687 RAB5AP20339 215 aa12.14□□□□□ -0.47
CHTOP-202ENST00000368687 COX19Q49B96 90 aa12.14□□□□□ -0.47
CHTOP-202ENST00000368687 CFAP161Q6P656 301 aa12.14□□□□□ -0.47
CHTOP-202ENST00000368687 MAP1LC3AQ9H492 121 aa12.14□□□□□ -0.47
CHTOP-202ENST00000368687 ABCA13Q86UQ4 5058 aa12.13□□□□□ -0.47
CHTOP-202ENST00000368687 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
CHTOP-202ENST00000368687 ZNF664Q8N3J9 261 aa12.13□□□□□ -0.47
CHTOP-202ENST00000368687 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
CHTOP-202ENST00000368687 IGKV3OR2-268A0A0C4DH90 116 aa12.12□□□□□ -0.47
CHTOP-202ENST00000368687 K7EMI3 77 aa12.12□□□□□ -0.47
CHTOP-202ENST00000368687 SS18Q15532 418 aa12.12□□□□□ -0.47
CHTOP-202ENST00000368687 CHCHD10Q8WYQ3 142 aaPredicted RBP12.12□□□□□ -0.47
CHTOP-202ENST00000368687 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
CHTOP-202ENST00000368687 SPANXA1Q9NS26 97 aa12.11□□□□□ -0.47
CHTOP-202ENST00000368687 GAGE12HA6NDE8 117 aa12.1□□□□□ -0.47
CHTOP-202ENST00000368687 SVBPQ8N300 66 aa12.1□□□□□ -0.47
CHTOP-202ENST00000368687 GNB1LQ9BYB4 327 aa12.1□□□□□ -0.47
CHTOP-202ENST00000368687 RPS10P5Q9NQ39 176 aa12.1□□□□□ -0.47
CHTOP-202ENST00000368687 AP5S1Q9NUS5 200 aa12.1□□□□□ -0.47
CHTOP-202ENST00000368687 LINC00959A0A1B0GUT2 108 aa12.09□□□□□ -0.47
CHTOP-202ENST00000368687 SNAPINO95295 136 aa12.09□□□□□ -0.47
CHTOP-202ENST00000368687 MT-ND6P03923 174 aa12.09□□□□□ -0.47
CHTOP-202ENST00000368687 hDV102S1A0JD36 115 aa12.08□□□□□ -0.48
CHTOP-202ENST00000368687 C1orf196B1AJZ1 125 aa12.08□□□□□ -0.48
CHTOP-202ENST00000368687 PRSS1P07477 247 aa12.08□□□□□ -0.48
CHTOP-202ENST00000368687 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
CHTOP-202ENST00000368687 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.07□□□□□ -0.48
CHTOP-202ENST00000368687 G0S2P27469 103 aa12.07□□□□□ -0.48
CHTOP-202ENST00000368687 CNBPP62633 177 aaKnown RBP12.07□□□□□ -0.48
CHTOP-202ENST00000368687 Q6ZSA8 131 aa12.07□□□□□ -0.48
CHTOP-202ENST00000368687 Q8N1X5 172 aa12.07□□□□□ -0.48
CHTOP-202ENST00000368687 Q8N8P6 123 aa12.07□□□□□ -0.48
CHTOP-202ENST00000368687 APOC3P02656 99 aa12.06□□□□□ -0.48
CHTOP-202ENST00000368687 XCL1P47992 114 aa12.06□□□□□ -0.48
CHTOP-202ENST00000368687 XGP55808 180 aa12.06□□□□□ -0.48
CHTOP-202ENST00000368687 MRPS36P82909 103 aaKnown RBP12.06□□□□□ -0.48
CHTOP-202ENST00000368687 ORMDL2Q53FV1 153 aa12.06□□□□□ -0.48
CHTOP-202ENST00000368687 CD164L2Q6UWJ8 174 aa12.06□□□□□ -0.48
CHTOP-202ENST00000368687 IFI27P40305 119 aaPredicted RBP12.05□□□□□ -0.48
CHTOP-202ENST00000368687 FOXI1Q12951 378 aa12.05□□□□□ -0.48
CHTOP-202ENST00000368687 PYGO1Q9Y3Y4 419 aa12.05□□□□□ -0.48
CHTOP-202ENST00000368687 LOC389332A0A1B0GUA5 103 aa12.04□□□□□ -0.48
CHTOP-202ENST00000368687 RPL39P62891 51 aaKnown RBP12.04□□□□□ -0.48
CHTOP-202ENST00000368687 Q6ZUT4 128 aa12.03□□□□□ -0.48
CHTOP-202ENST00000368687 C9orf163Q8N9P6 203 aa12.03□□□□□ -0.48
CHTOP-202ENST00000368687 GVQW2A0A096LPI5 108 aaPredicted RBP12.02□□□□□ -0.49
CHTOP-202ENST00000368687 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.49
CHTOP-202ENST00000368687 NPSP0C0P6 89 aa12.02□□□□□ -0.49
CHTOP-202ENST00000368687 C15orf56Q8N910 161 aa12.02□□□□□ -0.49
CHTOP-202ENST00000368687 CYSLTR1Q9Y271 337 aa12.02□□□□□ -0.49
CHTOP-202ENST00000368687 TRAV13-1A0A0B4J241 112 aa12.01□□□□□ -0.49
CHTOP-202ENST00000368687 LINC01549A6NIU2 74 aa12□□□□□ -0.49
CHTOP-202ENST00000368687 COX7A2LO14548 114 aa12□□□□□ -0.49
CHTOP-202ENST00000368687 PKIGQ9Y2B9 76 aa12□□□□□ -0.49
CHTOP-202ENST00000368687 IGHV3-64A0A075B6Q5 118 aa11.99□□□□□ -0.49
CHTOP-202ENST00000368687 MALP21145 153 aa11.99□□□□□ -0.49
CHTOP-202ENST00000368687 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
CHTOP-202ENST00000368687 LINC01620Q4KN68 170 aa11.99□□□□□ -0.49
CHTOP-202ENST00000368687 Q6ZN92 141 aa11.99□□□□□ -0.49
CHTOP-202ENST00000368687 TMEM141Q96I45 108 aa11.99□□□□□ -0.49
CHTOP-202ENST00000368687 FAM30AQ9NZY2 134 aa11.99□□□□□ -0.49
CHTOP-202ENST00000368687 IFITM10A6NMD0 228 aa11.98□□□□□ -0.49
CHTOP-202ENST00000368687 EPM2AB3EWF7 344 aa11.98□□□□□ -0.49
CHTOP-202ENST00000368687 RNASE13Q5GAN3 156 aaKnown RBP11.98□□□□□ -0.49
CHTOP-202ENST00000368687 PAPPA-AS1Q5QFB9 102 aa11.98□□□□□ -0.49
CHTOP-202ENST00000368687 C2orf66Q6UXQ4 117 aa11.98□□□□□ -0.49
CHTOP-202ENST00000368687 CHAC1Q9BUX1 264 aa11.98□□□□□ -0.49
CHTOP-202ENST00000368687 MRPL18Q9H0U6 180 aaKnown RBP11.98□□□□□ -0.49
CHTOP-202ENST00000368687 APOMO95445 188 aa11.97□□□□□ -0.49
CHTOP-202ENST00000368687 FABP9Q0Z7S8 132 aa11.97□□□□□ -0.49
CHTOP-202ENST00000368687 PRSS3P2Q8NHM4 247 aa11.97□□□□□ -0.49
CHTOP-202ENST00000368687 C2orf88Q9BSF0 95 aa11.97□□□□□ -0.49
CHTOP-202ENST00000368687 ALKBH7Q9BT30 221 aaPredicted RBP11.97□□□□□ -0.49
CHTOP-202ENST00000368687 FAM229AH3BQW9 127 aa11.96□□□□□ -0.49
CHTOP-202ENST00000368687 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
CHTOP-202ENST00000368687 HIGD2BQ4VC39 106 aa11.96□□□□□ -0.49
CHTOP-202ENST00000368687 LCE2DQ5TA82 110 aaPredicted RBP11.96□□□□□ -0.49
CHTOP-202ENST00000368687 TEX43Q6ZNM6 134 aa11.96□□□□□ -0.49
CHTOP-202ENST00000368687 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
CHTOP-202ENST00000368687 TGIF2-C20orf24A0A0A6YYL0 155 aa11.94□□□□□ -0.5
CHTOP-202ENST00000368687 SDIM1Q6ZPB5 146 aa11.94□□□□□ -0.5
CHTOP-202ENST00000368687 FAM104AQ969W3 186 aa11.94□□□□□ -0.5
CHTOP-202ENST00000368687 TRAPPC1Q9Y5R8 145 aa11.94□□□□□ -0.5
CHTOP-202ENST00000368687 LINC01546A6NGU7 62 aa11.93□□□□□ -0.5
CHTOP-202ENST00000368687 SCXQ7RTU7 201 aa11.93□□□□□ -0.5
CHTOP-202ENST00000368687 TIMM17AQ99595 171 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms