RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 IGKV2-29A2NJV5 120 aaPredicted RBP6.57□□□□□ -1.36
VTA1-201ENST00000367621 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
VTA1-201ENST00000367621 TEX43Q6ZNM6 134 aa6.57□□□□□ -1.36
VTA1-201ENST00000367621 ATP6V0E2Q8NHE4 81 aa6.57□□□□□ -1.36
VTA1-201ENST00000367621 TIMM17AQ99595 171 aa6.57□□□□□ -1.36
VTA1-201ENST00000367621 OPRPNQ99935 248 aaPredicted RBP6.57□□□□□ -1.36
VTA1-201ENST00000367621 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
VTA1-201ENST00000367621 TRBV6-8A0A0A6YYG3 113 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 LINC01549A6NIU2 74 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 H3BNG1 76 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 G0S2P27469 103 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 ZC2HC1BQ5TFG8 222 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 LGALS9CQ6DKI2 356 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 CEMP1Q6PRD7 247 aaPredicted RBP6.56□□□□□ -1.36
VTA1-201ENST00000367621 BAALCQ8WXS3 180 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 C12orf57Q99622 126 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 PMCHL2Q9BQD1 86 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 UBE2D4Q9Y2X8 147 aa6.56□□□□□ -1.36
VTA1-201ENST00000367621 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
VTA1-201ENST00000367621 IGLV4-3A0A075B6K6 122 aa6.55□□□□□ -1.36
VTA1-201ENST00000367621 TRAV12-1A0A0B4J245 112 aa6.55□□□□□ -1.36
VTA1-201ENST00000367621 PRSS29PA6NIE9 313 aa6.55□□□□□ -1.36
VTA1-201ENST00000367621 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.55□□□□□ -1.36
VTA1-201ENST00000367621 NHLRC4P0CG21 123 aaPredicted RBP6.55□□□□□ -1.36
VTA1-201ENST00000367621 MRPL23Q16540 153 aaKnown RBP6.55□□□□□ -1.36
VTA1-201ENST00000367621 MRPL52Q86TS9 123 aaKnown RBP6.55□□□□□ -1.36
VTA1-201ENST00000367621 TIMM21Q9BVV7 248 aa6.55□□□□□ -1.36
VTA1-201ENST00000367621 A0A087WX48 190 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 DEFB131BA0A096LNP1 70 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 H0Y8G0 127 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 PRSS1P07477 247 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 KRTAP10-2P60368 255 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 AMELXQ99217 191 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 TMEM243Q9BU79 118 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 CST9LQ9H4G1 147 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 SPANXA1Q9NS26 97 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 ICOSQ9Y6W8 199 aa6.54□□□□□ -1.36
VTA1-201ENST00000367621 TRBV25-1A0A075B6N4 114 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 NPSP0C0P6 89 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 FGF6P10767 208 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 MRPS36P82909 103 aaKnown RBP6.53□□□□□ -1.36
VTA1-201ENST00000367621 MAJINQ3KP22 176 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 TMEM97Q5BJF2 176 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 Q6ZN92 141 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 ATOH7Q8N100 152 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 MRPL35Q9NZE8 188 aaKnown RBP6.53□□□□□ -1.36
VTA1-201ENST00000367621 DNAH7Q8WXX0 4024 aa6.53□□□□□ -1.36
VTA1-201ENST00000367621 IGLV4-69A0A075B6H9 119 aa6.52□□□□□ -1.37
VTA1-201ENST00000367621 H7C423 109 aa6.52□□□□□ -1.37
VTA1-201ENST00000367621 TIRAPP58753 221 aa6.52□□□□□ -1.37
VTA1-201ENST00000367621 GAGE6Q13070 117 aa6.52□□□□□ -1.37
VTA1-201ENST00000367621 PMVKQ15126 192 aa6.52□□□□□ -1.37
VTA1-201ENST00000367621 LYPD5Q6UWN5 251 aa6.52□□□□□ -1.37
VTA1-201ENST00000367621 Q6ZUT4 128 aa6.52□□□□□ -1.37
VTA1-201ENST00000367621 SH2D6Q7Z4S9 175 aa6.52□□□□□ -1.37
VTA1-201ENST00000367621 CSDC2Q9Y534 153 aaKnown RBP6.52□□□□□ -1.37
VTA1-201ENST00000367621 C20orf202A1L168 122 aa6.51□□□□□ -1.37
VTA1-201ENST00000367621 RNASE13Q5GAN3 156 aaKnown RBP6.51□□□□□ -1.37
VTA1-201ENST00000367621 ZNF664Q8N3J9 261 aa6.51□□□□□ -1.37
VTA1-201ENST00000367621 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
VTA1-201ENST00000367621 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
VTA1-201ENST00000367621 IGLV4-60A0A075B6I1 120 aa6.5□□□□□ -1.37
VTA1-201ENST00000367621 TRAV9-2A0A087WT02 112 aa6.5□□□□□ -1.37
VTA1-201ENST00000367621 hDV102S1A0JD36 115 aa6.5□□□□□ -1.37
VTA1-201ENST00000367621 F8VRH5 84 aa6.5□□□□□ -1.37
VTA1-201ENST00000367621 PLA2G1BP04054 148 aaKnown RBP6.5□□□□□ -1.37
VTA1-201ENST00000367621 ESRGQ1W209 222 aa6.5□□□□□ -1.37
VTA1-201ENST00000367621 LELP1Q5T871 98 aa6.5□□□□□ -1.37
VTA1-201ENST00000367621 CHCHD5Q9BSY4 110 aa6.5□□□□□ -1.37
VTA1-201ENST00000367621 VCX2Q9H322 139 aa6.5□□□□□ -1.37
VTA1-201ENST00000367621 PLECQ15149 4684 aaKnown RBP6.5□□□□□ -1.37
VTA1-201ENST00000367621 DPM2O94777 84 aa6.49□□□□□ -1.37
VTA1-201ENST00000367621 IGKCP01834 107 aa6.49□□□□□ -1.37
VTA1-201ENST00000367621 RBX1P62877 108 aa6.49□□□□□ -1.37
VTA1-201ENST00000367621 A0A0J9YXV3 536 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 A0A1B0GUV1 79 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 C11orf86A6NJI1 115 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 UBE2L6O14933 153 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 IGLC3P0DOY3 106 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 ZNF25P17030 456 aaPredicted RBP6.48□□□□□ -1.37
VTA1-201ENST00000367621 UBE2D1P51668 147 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 MPV17L2Q567V2 206 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 FAM19A3Q7Z5A8 133 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 NFE4Q86UQ8 179 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 STPG4Q8N801 248 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 OR5A1Q8NGJ0 315 aa6.48□□□□□ -1.37
VTA1-201ENST00000367621 PLNP26678 52 aa6.47□□□□□ -1.37
VTA1-201ENST00000367621 AMMECR1LQ6DCA0 310 aa6.47□□□□□ -1.37
VTA1-201ENST00000367621 DGAT2L7PQ6IED9 249 aa6.47□□□□□ -1.37
VTA1-201ENST00000367621 C15orf53Q8NAA6 179 aa6.47□□□□□ -1.37
VTA1-201ENST00000367621 VAMP8Q9BV40 100 aa6.47□□□□□ -1.37
VTA1-201ENST00000367621 PAM16Q9Y3D7 125 aa6.47□□□□□ -1.37
VTA1-201ENST00000367621 TMEM262E9PQX1 116 aa6.46□□□□□ -1.38
VTA1-201ENST00000367621 S100A12P80511 92 aa6.46□□□□□ -1.38
VTA1-201ENST00000367621 COX6A2Q02221 97 aa6.46□□□□□ -1.38
VTA1-201ENST00000367621 SMAGPQ0VAQ4 97 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms