RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 FABP5Q01469 135 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 WHAMMP3Q1A5X7 153 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 Q3ZCU0 254 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 TRAPPC6BQ86SZ2 158 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 ACBD7Q8N6N7 88 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 FAM3CQ92520 227 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 TEKT1Q969V4 418 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 ISOC2Q96AB3 205 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 NRBF2Q96F24 287 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 CCDC43Q96MW1 224 aaKnown RBP-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 OLA1Q9NTK5 396 aaKnown RBP-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 STX8Q9UNK0 236 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 AP4S1Q9Y587 144 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 HFM1A2PYH4 1435 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 FHAD1B1AJZ9 1412 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 A2MP01023 1474 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 MROH1Q8NDA8 1641 aa-2.54□□□□□ -2.82
RNU6-228P-201ENST00000362700 FAM74A7A6NL05 159 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 FANCAO15360 1455 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 CSN2P05814 226 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 HSMCR30P0CW71 290 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 CFTRP13569 1480 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 TTPAP49638 278 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 RANP62826 216 aaKnown RBP-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 MYL5Q02045 173 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 JOSD1Q15040 202 aaPredicted RBP-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 BEX5Q5H9J7 111 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 OGFRL1Q5TC84 451 aaPredicted RBP-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 PPP1R42Q7Z4L9 355 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 TRAPPC5Q8IUR0 188 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 CXorf40AQ8TE69 158 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 MS4A6EQ96DS6 147 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 TSGA13Q96PP4 275 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST1H2BLQ99880 126 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 SEC11CQ9BY50 192 aa-2.55□□□□□ -2.82
RNU6-228P-201ENST00000362700 KDM5DQ9BY66 1539 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 TCOF1Q13428 1488 aaKnown RBP-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 IGLC7A0M8Q6 106 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 H0YIV9 168 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 HTN3P15516 51 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 RAB8AP61006 207 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 YWHAGP61981 247 aaKnown RBP eCLIP-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 GNGT1P63211 74 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 MRPS25P82663 173 aaKnown RBP-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 FAM74A3Q4VXF1 159 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 LRRC23Q53EV4 343 aaPredicted RBP-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 C10orf128Q5T292 105 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 FUNDC1Q8IVP5 155 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 ST13P4Q8IZP2 240 aaPredicted RBP-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 DTD1Q8TEA8 209 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 AP3S1Q92572 193 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 RCN3Q96D15 328 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 FMC1Q96HJ9 113 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 CDKN2AIPNLQ96HQ2 116 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 LENEPQ9Y5L5 61 aa-2.56□□□□□ -2.82
RNU6-228P-201ENST00000362700 A6NDN8 102 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 TMEM262E9PQX1 116 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 H3BP45 60 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 EDF1O60869 148 aaKnown RBP-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 NDUFB1O75438 58 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 ATP5HO75947 161 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 SNCGO76070 127 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 IL5P05113 134 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 CXCL1P09341 107 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 SAA2P0DJI9 122 aaPredicted RBP-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 CCL2P13500 99 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 RPL23AP62750 156 aaKnown RBP-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 CCL20P78556 96 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 TRAM1Q15629 374 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 CST9Q5W186 159 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 RPL22L1Q6P5R6 122 aaKnown RBP-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 HOOK3Q86VS8 718 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 C10orf107Q8IVU9 208 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 OR4F6Q8NGB9 312 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 RPEQ96AT9 228 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 SMIM7Q9BQ49 75 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 NAPBQ9H115 298 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 TMEM133Q9H2Q1 129 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 AKAP7Q9P0M2 348 aaPredicted RBP-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 COPS7AQ9UBW8 275 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 GINS2Q9Y248 185 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 MYO3AQ8NEV4 1616 aa-2.57□□□□□ -2.82
RNU6-228P-201ENST00000362700 CCNB3Q8WWL7 1395 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 ARFGEF2Q9Y6D5 1785 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 SERTM2A0A1B0GWG4 89 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 CRYM-AS1A6NIL9 109 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 H3BQF6 201 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 H3BSH0 61 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 LSM1O15116 133 aaKnown RBP-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 NDUFB3O43676 98 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HBDP02042 147 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 SRP19P09132 144 aaKnown RBP-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 IGLC1P0CG04 106 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST1H2BOP23527 126 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 IFNA8P32881 189 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST1H2BBP33778 126 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST1H2BDP58876 126 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST1H2BCP62807 126 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST2H2BEQ16778 126 aa-2.58□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms