RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 DSCAMO60469 2012 aa8.13□□□□□ -1.11
CLIP1-203ENST00000361654 MRGPRG-AS1Q2M3A8 158 aa8.13□□□□□ -1.11
CLIP1-203ENST00000361654 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
CLIP1-203ENST00000361654 A0A0J9YXY3 114 aa8.13□□□□□ -1.11
CLIP1-203ENST00000361654 ZNF80P51504 273 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-203ENST00000361654 TRAV23DV6A0A075B6W5 121 aa8.12□□□□□ -1.11
CLIP1-203ENST00000361654 C20orf173Q96LM9 149 aa8.12□□□□□ -1.11
CLIP1-203ENST00000361654 CLUHP3Q96NS8 147 aa8.12□□□□□ -1.11
CLIP1-203ENST00000361654 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
CLIP1-203ENST00000361654 B5MCH6 92 aa8.12□□□□□ -1.11
CLIP1-203ENST00000361654 CRYGBP07316 175 aa8.12□□□□□ -1.11
CLIP1-203ENST00000361654 NHLRC4P0CG21 123 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-203ENST00000361654 C22orf34Q6ZV56 151 aa8.12□□□□□ -1.11
CLIP1-203ENST00000361654 ZNF295-AS1Q8N0V1 137 aa8.12□□□□□ -1.11
CLIP1-203ENST00000361654 IGLV5-52A0A0A0MRZ9 124 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 FOXI1Q12951 378 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 IGLC6P0CF74 106 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 ABCA2Q9BZC7 2435 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 WFDC2Q14508 124 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 MUC7Q8TAX7 377 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 FREM1Q5H8C1 2179 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 FAM236AA0A1B0GUQ0 79 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 FAM236BA0A1B0GV22 79 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 FXYD2P54710 66 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
CLIP1-203ENST00000361654 CHCHD7Q9BUK0 85 aa8.1□□□□□ -1.11
CLIP1-203ENST00000361654 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
CLIP1-203ENST00000361654 NCOR2Q9Y618 2525 aa8.1□□□□□ -1.11
CLIP1-203ENST00000361654 M0QY20 66 aa8.1□□□□□ -1.11
CLIP1-203ENST00000361654 Q6ZPA2 131 aa8.1□□□□□ -1.11
CLIP1-203ENST00000361654 IGLV4-3A0A075B6K6 122 aa8.1□□□□□ -1.11
CLIP1-203ENST00000361654 CRIP3Q6Q6R5 217 aa8.1□□□□□ -1.11
CLIP1-203ENST00000361654 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
CLIP1-203ENST00000361654 COL4A4P53420 1690 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-203ENST00000361654 ADAMTS9Q9P2N4 1935 aa8.09□□□□□ -1.11
CLIP1-203ENST00000361654 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
CLIP1-203ENST00000361654 C1orf158Q8N1D5 194 aa8.09□□□□□ -1.11
CLIP1-203ENST00000361654 SMR3AQ99954 134 aa8.09□□□□□ -1.11
CLIP1-203ENST00000361654 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
CLIP1-203ENST00000361654 TEX49A0A1B0GTD5 131 aa8.09□□□□□ -1.11
CLIP1-203ENST00000361654 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
CLIP1-203ENST00000361654 TTTY13Q9BZ97 58 aa8.09□□□□□ -1.11
CLIP1-203ENST00000361654 CCKP06307 115 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 WFDC10BQ8IUB3 73 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 WFDC10AQ9H1F0 79 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 PRR14LQ5THK1 2151 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 OBSL1O75147 1896 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 P0C879 139 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 C6orf99Q4VX62 202 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 LINC00643Q86TS7 51 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 ATP5EP2Q5VTU8 51 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
CLIP1-203ENST00000361654 Q8N6K4 173 aa8.07□□□□□ -1.12
CLIP1-203ENST00000361654 ZNF22P17026 224 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-203ENST00000361654 GDF5OSQ5U4N7 250 aa8.07□□□□□ -1.12
CLIP1-203ENST00000361654 LINC00308Q8TCZ7 52 aa8.07□□□□□ -1.12
CLIP1-203ENST00000361654 LINC00959A0A1B0GUT2 108 aa8.06□□□□□ -1.12
CLIP1-203ENST00000361654 KIF26AQ9ULI4 1882 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-203ENST00000361654 TNRC6AQ8NDV7 1962 aaKnown RBP8.06□□□□□ -1.12
CLIP1-203ENST00000361654 TMEM223A0PJW6 202 aa8.06□□□□□ -1.12
CLIP1-203ENST00000361654 TRBV6-5A0A0K0K1A5 114 aa8.06□□□□□ -1.12
CLIP1-203ENST00000361654 C18orf65Q6ZTR6 163 aa8.05□□□□□ -1.12
CLIP1-203ENST00000361654 COX17Q14061 63 aa8.05□□□□□ -1.12
CLIP1-203ENST00000361654 PIK3CD-AS1Q5SR53 167 aa8.05□□□□□ -1.12
CLIP1-203ENST00000361654 DCANP1Q8TF63 244 aa8.05□□□□□ -1.12
CLIP1-203ENST00000361654 Q8N9L7 120 aa8.05□□□□□ -1.12
CLIP1-203ENST00000361654 C16orf95Q9H693 158 aa8.05□□□□□ -1.12
CLIP1-203ENST00000361654 KIAA1549LQ6ZVL6 1849 aa8.04□□□□□ -1.12
CLIP1-203ENST00000361654 KRTAP10-9P60411 292 aa8.04□□□□□ -1.12
CLIP1-203ENST00000361654 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
CLIP1-203ENST00000361654 TRBV27A0A0K0K1C4 114 aa8.04□□□□□ -1.12
CLIP1-203ENST00000361654 A0A1B0GXF2 115 aa8.04□□□□□ -1.12
CLIP1-203ENST00000361654 RPL37AP8A6NKH3 93 aa8.03□□□□□ -1.12
CLIP1-203ENST00000361654 M0QXV9 152 aa8.03□□□□□ -1.12
CLIP1-203ENST00000361654 PRRC2AP48634 2157 aaKnown RBP8.03□□□□□ -1.12
CLIP1-203ENST00000361654 IGLV1-51P01701 117 aa8.03□□□□□ -1.12
CLIP1-203ENST00000361654 PROK1P58294 105 aa8.03□□□□□ -1.12
CLIP1-203ENST00000361654 IGLV2-8P01709 118 aa8.03□□□□□ -1.12
CLIP1-203ENST00000361654 LINC00310P59036 64 aa8.02□□□□□ -1.13
CLIP1-203ENST00000361654 MRPS36P82909 103 aaKnown RBP8.02□□□□□ -1.13
CLIP1-203ENST00000361654 LINC00526Q96FQ7 95 aa8.02□□□□□ -1.13
CLIP1-203ENST00000361654 MLST8Q9BVC4 326 aa8.02□□□□□ -1.13
CLIP1-203ENST00000361654 EGFEM1PQ0D2K5 195 aa8.02□□□□□ -1.13
CLIP1-203ENST00000361654 LOC100131303A0A0U1RQF7 123 aa8.02□□□□□ -1.13
CLIP1-203ENST00000361654 KLLNB2CW77 178 aa8.02□□□□□ -1.13
CLIP1-203ENST00000361654 TIMM17BO60830 172 aa8.02□□□□□ -1.13
CLIP1-203ENST00000361654 TRBV30A0A0K0K1B3 111 aa8.01□□□□□ -1.13
CLIP1-203ENST00000361654 Q6ZQY7 126 aa8.01□□□□□ -1.13
CLIP1-203ENST00000361654 TNRC6BQ9UPQ9 1833 aaKnown RBP8.01□□□□□ -1.13
CLIP1-203ENST00000361654 RETNQ9HD89 108 aa8.01□□□□□ -1.13
CLIP1-203ENST00000361654 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
CLIP1-203ENST00000361654 ZNF73O43830 326 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-203ENST00000361654 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
CLIP1-203ENST00000361654 Q8IZM0 81 aa8.01□□□□□ -1.13
CLIP1-203ENST00000361654 NCOA6Q14686 2063 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-203ENST00000361654 C3orf84H3BNL1 204 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms