RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 A0A0J9YX75 114 aa13.62□□□□□ -0.23
SNX11-201ENST00000359238 H7C2G1 150 aa13.62□□□□□ -0.23
SNX11-201ENST00000359238 LEPROTO15243 131 aa13.62□□□□□ -0.23
SNX11-201ENST00000359238 TRBV30A0A0K0K1B3 111 aa13.61□□□□□ -0.23
SNX11-201ENST00000359238 POLR2KP53803 58 aaKnown RBP13.61□□□□□ -0.23
SNX11-201ENST00000359238 APRG1Q8IVJ8 170 aa13.61□□□□□ -0.23
SNX11-201ENST00000359238 MUSTN1Q8IVN3 82 aa13.61□□□□□ -0.23
SNX11-201ENST00000359238 TRAV2A0A0B4J234 112 aa13.61□□□□□ -0.23
SNX11-201ENST00000359238 KNCNA6PVL3 124 aa13.61□□□□□ -0.23
SNX11-201ENST00000359238 ADARB2-AS1A8MUL3 147 aa13.61□□□□□ -0.23
SNX11-201ENST00000359238 TRRAPQ9Y4A5 3859 aa13.6□□□□□ -0.23
SNX11-201ENST00000359238 KLLNB2CW77 178 aa13.6□□□□□ -0.23
SNX11-201ENST00000359238 RPL39P62891 51 aaKnown RBP13.6□□□□□ -0.23
SNX11-201ENST00000359238 Q1RN00 199 aa13.6□□□□□ -0.23
SNX11-201ENST00000359238 MEIG1Q5JSS6 88 aa13.6□□□□□ -0.23
SNX11-201ENST00000359238 DYNLRB2Q8TF09 96 aa13.6□□□□□ -0.23
SNX11-201ENST00000359238 TNFRSF18Q9Y5U5 241 aa13.6□□□□□ -0.23
SNX11-201ENST00000359238 TRAV12-3A0A0B4J271 114 aa13.59□□□□□ -0.23
SNX11-201ENST00000359238 VCYO14598 125 aa13.59□□□□□ -0.23
SNX11-201ENST00000359238 SNRPD3P62318 126 aaKnown RBP13.59□□□□□ -0.23
SNX11-201ENST00000359238 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
SNX11-201ENST00000359238 KIF25-AS1Q9Y6Z4 181 aa13.59□□□□□ -0.23
SNX11-201ENST00000359238 TMEM223A0PJW6 202 aa13.58□□□□□ -0.23
SNX11-201ENST00000359238 NXPH4O95158 308 aa13.58□□□□□ -0.23
SNX11-201ENST00000359238 LINC00315P59091 139 aa13.58□□□□□ -0.23
SNX11-201ENST00000359238 DEFB131AP59861 70 aa13.58□□□□□ -0.23
SNX11-201ENST00000359238 DEFB114Q30KQ6 69 aa13.58□□□□□ -0.24
SNX11-201ENST00000359238 RNASE3P12724 160 aaKnown RBP13.57□□□□□ -0.24
SNX11-201ENST00000359238 FAM240AA0A1B0GVK7 77 aa13.57□□□□□ -0.24
SNX11-201ENST00000359238 RBMY1BA6NDE4 496 aaKnown RBP13.57□□□□□ -0.24
SNX11-201ENST00000359238 RBMY1EA6NEQ0 496 aaKnown RBP13.57□□□□□ -0.24
SNX11-201ENST00000359238 M0R2P5 195 aa13.57□□□□□ -0.24
SNX11-201ENST00000359238 RBMY1DP0C7P1 496 aaKnown RBP13.57□□□□□ -0.24
SNX11-201ENST00000359238 C2orf82Q6UX34 121 aa13.57□□□□□ -0.24
SNX11-201ENST00000359238 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
SNX11-201ENST00000359238 TRIAP1O43715 76 aa13.56□□□□□ -0.24
SNX11-201ENST00000359238 PRM2P04554 102 aa13.56□□□□□ -0.24
SNX11-201ENST00000359238 RBMY1A1P0DJD3 496 aaKnown RBP13.56□□□□□ -0.24
SNX11-201ENST00000359238 RBMY1CP0DJD4 496 aa13.56□□□□□ -0.24
SNX11-201ENST00000359238 RBMY1FQ15415 496 aaKnown RBP13.56□□□□□ -0.24
SNX11-201ENST00000359238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.56□□□□□ -0.24
SNX11-201ENST00000359238 SDHAF1A6NFY7 115 aa13.55□□□□□ -0.24
SNX11-201ENST00000359238 H3BT86 120 aa13.55□□□□□ -0.24
SNX11-201ENST00000359238 ZNF256Q9Y2P7 627 aaPredicted RBP13.55□□□□□ -0.24
SNX11-201ENST00000359238 H7C423 109 aa13.54□□□□□ -0.24
SNX11-201ENST00000359238 DEFB121Q5J5C9 76 aa13.54□□□□□ -0.24
SNX11-201ENST00000359238 SUMO4Q6EEV6 95 aa13.54□□□□□ -0.24
SNX11-201ENST00000359238 ATRQ13535 2644 aa13.53□□□□□ -0.24
SNX11-201ENST00000359238 TRBV27A0A0K0K1C4 114 aa13.53□□□□□ -0.24
SNX11-201ENST00000359238 TRBV7-7A0A0K0K1E9 115 aa13.53□□□□□ -0.24
SNX11-201ENST00000359238 MAP6D1Q9H9H5 199 aa13.53□□□□□ -0.24
SNX11-201ENST00000359238 SPATA3Q8NHX4 192 aa13.52□□□□□ -0.25
SNX11-201ENST00000359238 DEFB104AQ8WTQ1 72 aa13.52□□□□□ -0.25
SNX11-201ENST00000359238 TRBV6-5A0A0K0K1A5 114 aa13.51□□□□□ -0.25
SNX11-201ENST00000359238 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
SNX11-201ENST00000359238 ZNF56Q15929 161 aa13.51□□□□□ -0.25
SNX11-201ENST00000359238 LINC01587Q99440 93 aa13.51□□□□□ -0.25
SNX11-201ENST00000359238 JPT2Q9H910 190 aa13.51□□□□□ -0.25
SNX11-201ENST00000359238 ICOSQ9Y6W8 199 aa13.51□□□□□ -0.25
SNX11-201ENST00000359238 A0A0J9YXY3 114 aa13.51□□□□□ -0.25
SNX11-201ENST00000359238 NOTCH3Q9UM47 2321 aa13.5□□□□□ -0.25
SNX11-201ENST00000359238 ODF3L2Q3SX64 289 aa13.5□□□□□ -0.25
SNX11-201ENST00000359238 CHCHD5Q9BSY4 110 aa13.5□□□□□ -0.25
SNX11-201ENST00000359238 COX6CP09669 75 aa13.49□□□□□ -0.25
SNX11-201ENST00000359238 RHOHQ15669 191 aa13.48□□□□□ -0.25
SNX11-201ENST00000359238 PF4P02776 101 aa13.48□□□□□ -0.25
SNX11-201ENST00000359238 LITAFQ99732 161 aa13.48□□□□□ -0.25
SNX11-201ENST00000359238 IGHV3-64A0A075B6Q5 118 aa13.47□□□□□ -0.25
SNX11-201ENST00000359238 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
SNX11-201ENST00000359238 F5H697 171 aa13.47□□□□□ -0.25
SNX11-201ENST00000359238 WFDC10AQ9H1F0 79 aa13.47□□□□□ -0.25
SNX11-201ENST00000359238 TMEM101Q96IK0 257 aa13.46□□□□□ -0.25
SNX11-201ENST00000359238 HTN1P15515 57 aa13.46□□□□□ -0.26
SNX11-201ENST00000359238 IMUPQ9GZP8 106 aa13.46□□□□□ -0.26
SNX11-201ENST00000359238 A0A087WWL8 130 aa13.45□□□□□ -0.26
SNX11-201ENST00000359238 LST1O00453 97 aa13.45□□□□□ -0.26
SNX11-201ENST00000359238 SPANXDQ9BXN6 97 aa13.45□□□□□ -0.26
SNX11-201ENST00000359238 SPANXCQ9NY87 97 aa13.45□□□□□ -0.26
SNX11-201ENST00000359238 MAST4O15021 2626 aa13.45□□□□□ -0.26
SNX11-201ENST00000359238 IGHV3-16A0A0C4DH30 117 aa13.45□□□□□ -0.26
SNX11-201ENST00000359238 FBN1P35555 2871 aaKnown RBP13.45□□□□□ -0.26
SNX11-201ENST00000359238 TRAV25A0A0B4J276 109 aa13.44□□□□□ -0.26
SNX11-201ENST00000359238 A0A0J9YXV3 536 aa13.44□□□□□ -0.26
SNX11-201ENST00000359238 A8MTW9 85 aa13.44□□□□□ -0.26
SNX11-201ENST00000359238 TRGV11A0A075B6L2 103 aa13.43□□□□□ -0.26
SNX11-201ENST00000359238 IGHV3-30-3P0DP02 117 aa13.43□□□□□ -0.26
SNX11-201ENST00000359238 LINC00482Q8N8I6 264 aa13.43□□□□□ -0.26
SNX11-201ENST00000359238 IGHV1OR15-1A0A075B7D0 117 aa13.42□□□□□ -0.26
SNX11-201ENST00000359238 ACYP1P07311 99 aa13.42□□□□□ -0.26
SNX11-201ENST00000359238 CLEC2BQ92478 149 aa13.42□□□□□ -0.26
SNX11-201ENST00000359238 PPDPFQ9H3Y8 114 aa13.42□□□□□ -0.26
SNX11-201ENST00000359238 IGLV1-51P01701 117 aa13.42□□□□□ -0.26
SNX11-201ENST00000359238 PRSS2P07478 247 aa13.42□□□□□ -0.26
SNX11-201ENST00000359238 C20orf203Q8NBC4 194 aa13.42□□□□□ -0.26
SNX11-201ENST00000359238 IGLV4-3A0A075B6K6 122 aa13.41□□□□□ -0.26
SNX11-201ENST00000359238 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
SNX11-201ENST00000359238 TIMM21Q9BVV7 248 aa13.41□□□□□ -0.26
SNX11-201ENST00000359238 M0QY20 66 aa13.4□□□□□ -0.26
SNX11-201ENST00000359238 MIAQ16674 131 aa13.4□□□□□ -0.26
SNX11-201ENST00000359238 C3orf56Q8N813 242 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms