RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 LINC00574Q9H8X3 128 aa6.66□□□□□ -1.34
COL6A6-201ENST00000358511 C5orf56Q8N8D9 126 aa6.66□□□□□ -1.34
COL6A6-201ENST00000358511 VPREB3Q9UKI3 123 aa6.66□□□□□ -1.34
COL6A6-201ENST00000358511 IGHV4-30-2A0A087WSY4 118 aa6.66□□□□□ -1.34
COL6A6-201ENST00000358511 A0A096LNI7 61 aa6.66□□□□□ -1.34
COL6A6-201ENST00000358511 RNF185Q96GF1 192 aa6.66□□□□□ -1.34
COL6A6-201ENST00000358511 WT1P19544 449 aaPredicted RBP6.66□□□□□ -1.34
COL6A6-201ENST00000358511 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
COL6A6-201ENST00000358511 COX7BP24311 80 aa6.65□□□□□ -1.34
COL6A6-201ENST00000358511 SERTAD4-AS1Q5TG53 156 aa6.65□□□□□ -1.34
COL6A6-201ENST00000358511 TRBV10-1A0A0K0K1A3 114 aa6.65□□□□□ -1.34
COL6A6-201ENST00000358511 IGLV2-11P01706 119 aa6.65□□□□□ -1.34
COL6A6-201ENST00000358511 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
COL6A6-201ENST00000358511 BRWD1-AS2P59051 145 aa6.65□□□□□ -1.35
COL6A6-201ENST00000358511 NRACQ8N912 160 aa6.65□□□□□ -1.35
COL6A6-201ENST00000358511 MYCNOSP40205 109 aa6.65□□□□□ -1.35
COL6A6-201ENST00000358511 FAM19A3Q7Z5A8 133 aa6.65□□□□□ -1.35
COL6A6-201ENST00000358511 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.35
COL6A6-201ENST00000358511 CRIP3Q6Q6R5 217 aa6.65□□□□□ -1.35
COL6A6-201ENST00000358511 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.35
COL6A6-201ENST00000358511 ODF3Q96PU9 254 aa6.65□□□□□ -1.35
COL6A6-201ENST00000358511 K7EMT4 169 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 AJUBAQ96IF1 538 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 SMIM26A0A096LP01 95 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 IGLV1-47P01700 117 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 TMEM263Q8WUH6 116 aaKnown RBP6.64□□□□□ -1.35
COL6A6-201ENST00000358511 SNURFQ9Y675 71 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 IGHV4-38-2P0DP08 117 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 HRCT1Q6UXD1 115 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 Q8N9W7 124 aa6.64□□□□□ -1.35
COL6A6-201ENST00000358511 COL27A1Q8IZC6 1860 aaPredicted RBP6.64□□□□□ -1.35
COL6A6-201ENST00000358511 IGKV2-24A0A0C4DH68 120 aa6.63□□□□□ -1.35
COL6A6-201ENST00000358511 PLA2G5P39877 138 aa6.63□□□□□ -1.35
COL6A6-201ENST00000358511 IBA57-AS1B1ANH7 110 aa6.63□□□□□ -1.35
COL6A6-201ENST00000358511 CRIP1P50238 77 aa6.63□□□□□ -1.35
COL6A6-201ENST00000358511 HHLA3Q9XRX5 114 aa6.63□□□□□ -1.35
COL6A6-201ENST00000358511 FAM222AQ5U5X8 452 aa6.63□□□□□ -1.35
COL6A6-201ENST00000358511 CEMP1Q6PRD7 247 aaPredicted RBP6.63□□□□□ -1.35
COL6A6-201ENST00000358511 CNFNQ9BYD5 112 aa6.63□□□□□ -1.35
COL6A6-201ENST00000358511 APRG1Q8IVJ8 170 aa6.63□□□□□ -1.35
COL6A6-201ENST00000358511 UBE2D2P62837 147 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 SPAG11BQ08648 103 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 SPTBN4Q9H254 2564 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 DEFB136Q30KP8 78 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 A0A0J9YX75 114 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 LINC00467Q9BRT7 94 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 CDKN2A-AS1Q9UH64 79 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 ACANP16112 2415 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 TRBV27A0A0K0K1C4 114 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 PMAIP1Q13794 54 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 Q6JHZ5 121 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 SPINK6Q6UWN8 80 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 ZFAND2AQ8N6M9 145 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
COL6A6-201ENST00000358511 JMJD1CQ15652 2540 aa6.61□□□□□ -1.35
COL6A6-201ENST00000358511 A0A087WZ39 114 aa6.61□□□□□ -1.35
COL6A6-201ENST00000358511 J3QKU1 62 aa6.61□□□□□ -1.35
COL6A6-201ENST00000358511 CCL24O00175 119 aa6.61□□□□□ -1.35
COL6A6-201ENST00000358511 SLURP1P55000 103 aa6.61□□□□□ -1.35
COL6A6-201ENST00000358511 WFDC10BQ8IUB3 73 aa6.61□□□□□ -1.35
COL6A6-201ENST00000358511 IL17DQ8TAD2 202 aa6.61□□□□□ -1.35
COL6A6-201ENST00000358511 M0QY20 66 aa6.61□□□□□ -1.35
COL6A6-201ENST00000358511 Q6ZVQ6 151 aa6.6□□□□□ -1.35
COL6A6-201ENST00000358511 PYGO1Q9Y3Y4 419 aa6.6□□□□□ -1.35
COL6A6-201ENST00000358511 ESM1Q9NQ30 184 aa6.6□□□□□ -1.35
COL6A6-201ENST00000358511 VPREB1P12018 145 aa6.6□□□□□ -1.35
COL6A6-201ENST00000358511 PIEZO1Q92508 2521 aa6.59□□□□□ -1.35
COL6A6-201ENST00000358511 UNQ9165/PRO28630Q6UXU0 137 aa6.59□□□□□ -1.35
COL6A6-201ENST00000358511 NRGNQ92686 78 aa6.59□□□□□ -1.35
COL6A6-201ENST00000358511 CCDC140Q96MF4 163 aa6.59□□□□□ -1.35
COL6A6-201ENST00000358511 SLPIP03973 132 aa6.59□□□□□ -1.35
COL6A6-201ENST00000358511 MIFP14174 115 aa6.59□□□□□ -1.36
COL6A6-201ENST00000358511 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
COL6A6-201ENST00000358511 DEFB1P60022 68 aa6.58□□□□□ -1.36
COL6A6-201ENST00000358511 IGF2-ASQ6U949 168 aa6.58□□□□□ -1.36
COL6A6-201ENST00000358511 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
COL6A6-201ENST00000358511 Q6ZS46 218 aa6.58□□□□□ -1.36
COL6A6-201ENST00000358511 CEP295Q9C0D2 2601 aa6.58□□□□□ -1.36
COL6A6-201ENST00000358511 MTORP42345 2549 aa6.58□□□□□ -1.36
COL6A6-201ENST00000358511 HIGD2AQ9BW72 106 aa6.58□□□□□ -1.36
COL6A6-201ENST00000358511 SCXQ7RTU7 201 aa6.57□□□□□ -1.36
COL6A6-201ENST00000358511 TMEM89A2RUT3 159 aa6.57□□□□□ -1.36
COL6A6-201ENST00000358511 CCKP06307 115 aa6.57□□□□□ -1.36
COL6A6-201ENST00000358511 C9orf85Q96MD7 179 aa6.57□□□□□ -1.36
COL6A6-201ENST00000358511 C9orf66Q5T8R8 295 aa6.56□□□□□ -1.36
COL6A6-201ENST00000358511 K7ENP7 123 aa6.56□□□□□ -1.36
COL6A6-201ENST00000358511 SPART-AS1P0CW21 52 aa6.56□□□□□ -1.36
COL6A6-201ENST00000358511 C14orf177Q52M58 125 aa6.56□□□□□ -1.36
COL6A6-201ENST00000358511 SIRPDQ9H106 197 aa6.56□□□□□ -1.36
COL6A6-201ENST00000358511 C4orf3Q8WVX3 66 aa6.55□□□□□ -1.36
COL6A6-201ENST00000358511 TSHBP01222 138 aa6.55□□□□□ -1.36
COL6A6-201ENST00000358511 DEFB112Q30KQ8 113 aa6.55□□□□□ -1.36
COL6A6-201ENST00000358511 Q8N7P7 452 aa6.55□□□□□ -1.36
COL6A6-201ENST00000358511 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
COL6A6-201ENST00000358511 URB1-AS1Q96HZ7 61 aa6.54□□□□□ -1.36
COL6A6-201ENST00000358511 COX17Q14061 63 aa6.54□□□□□ -1.36
COL6A6-201ENST00000358511 CDIP1Q9H305 208 aa6.54□□□□□ -1.36
COL6A6-201ENST00000358511 EP400Q96L91 3159 aa6.54□□□□□ -1.36
COL6A6-201ENST00000358511 IGFL2Q6UWQ7 119 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms