RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 FCER1GP30273 86 aa13.22□□□□□ -0.29
PPP1CA-202ENST00000358239 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
PPP1CA-202ENST00000358239 CHCHD10Q8WYQ3 142 aaPredicted RBP13.22□□□□□ -0.29
PPP1CA-202ENST00000358239 KIR2DL4Q99706 377 aa13.22□□□□□ -0.29
PPP1CA-202ENST00000358239 SMKR1H3BMG3 65 aa13.21□□□□□ -0.29
PPP1CA-202ENST00000358239 MRPL51Q4U2R6 128 aaKnown RBP13.21□□□□□ -0.29
PPP1CA-202ENST00000358239 F8W036 122 aa13.2□□□□□ -0.3
PPP1CA-202ENST00000358239 HBBP68871 147 aa13.2□□□□□ -0.3
PPP1CA-202ENST00000358239 C20orf78Q9BR46 151 aa13.2□□□□□ -0.3
PPP1CA-202ENST00000358239 TRBV24-1A0A075B6N3 115 aa13.19□□□□□ -0.3
PPP1CA-202ENST00000358239 CKS2P33552 79 aa13.19□□□□□ -0.3
PPP1CA-202ENST00000358239 SDIM1Q6ZPB5 146 aa13.19□□□□□ -0.3
PPP1CA-202ENST00000358239 C15orf56Q8N910 161 aa13.19□□□□□ -0.3
PPP1CA-202ENST00000358239 CDC42SE2Q9NRR3 84 aa13.19□□□□□ -0.3
PPP1CA-202ENST00000358239 IGHV3-64A0A075B6Q5 118 aa13.18□□□□□ -0.3
PPP1CA-202ENST00000358239 TCAPO15273 167 aa13.18□□□□□ -0.3
PPP1CA-202ENST00000358239 PNRC1Q12796 327 aaPredicted RBP13.18□□□□□ -0.3
PPP1CA-202ENST00000358239 CSDC2Q9Y534 153 aaKnown RBP13.18□□□□□ -0.3
PPP1CA-202ENST00000358239 LINC00959A0A1B0GUT2 108 aa13.17□□□□□ -0.3
PPP1CA-202ENST00000358239 A0A1B0GXF2 115 aa13.17□□□□□ -0.3
PPP1CA-202ENST00000358239 RPL32P62910 135 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-202ENST00000358239 MRPL54Q6P161 138 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-202ENST00000358239 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
PPP1CA-202ENST00000358239 ZNF664Q8N3J9 261 aa13.17□□□□□ -0.3
PPP1CA-202ENST00000358239 GVQW2A0A096LPI5 108 aaPredicted RBP13.16□□□□□ -0.3
PPP1CA-202ENST00000358239 FOXI1Q12951 378 aa13.16□□□□□ -0.3
PPP1CA-202ENST00000358239 SS18Q15532 418 aa13.16□□□□□ -0.3
PPP1CA-202ENST00000358239 TMEM18Q96B42 140 aa13.16□□□□□ -0.3
PPP1CA-202ENST00000358239 PPBPP02775 128 aa13.15□□□□□ -0.3
PPP1CA-202ENST00000358239 SLPIP03973 132 aa13.15□□□□□ -0.3
PPP1CA-202ENST00000358239 XCL1P47992 114 aa13.15□□□□□ -0.3
PPP1CA-202ENST00000358239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.15□□□□□ -0.3
PPP1CA-202ENST00000358239 PHOX2AO14813 284 aa13.14□□□□□ -0.31
PPP1CA-202ENST00000358239 CCL25O15444 150 aa13.14□□□□□ -0.31
PPP1CA-202ENST00000358239 TNFRSF6BO95407 300 aa13.14□□□□□ -0.31
PPP1CA-202ENST00000358239 CIRBPQ14011 172 aaKnown RBP13.14□□□□□ -0.31
PPP1CA-202ENST00000358239 UBE2D4Q9Y2X8 147 aa13.14□□□□□ -0.31
PPP1CA-202ENST00000358239 D6R8Y8 96 aa13.13□□□□□ -0.31
PPP1CA-202ENST00000358239 ANAPC16Q96DE5 110 aa13.13□□□□□ -0.31
PPP1CA-202ENST00000358239 TIMM21Q9BVV7 248 aa13.13□□□□□ -0.31
PPP1CA-202ENST00000358239 HERC1Q15751 4861 aa13.12□□□□□ -0.31
PPP1CA-202ENST00000358239 MT-ND4LP03901 98 aa13.12□□□□□ -0.31
PPP1CA-202ENST00000358239 HIGD2BQ4VC39 106 aa13.12□□□□□ -0.31
PPP1CA-202ENST00000358239 CD164L2Q6UWJ8 174 aa13.12□□□□□ -0.31
PPP1CA-202ENST00000358239 SMIM2Q9BVW6 85 aa13.12□□□□□ -0.31
PPP1CA-202ENST00000358239 IGHV1-58A0A0C4DH39 117 aa13.11□□□□□ -0.31
PPP1CA-202ENST00000358239 C1orf196B1AJZ1 125 aa13.11□□□□□ -0.31
PPP1CA-202ENST00000358239 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
PPP1CA-202ENST00000358239 ORMDL3Q8N138 153 aa13.1□□□□□ -0.31
PPP1CA-202ENST00000358239 PANO1I0J062 215 aa13.09□□□□□ -0.31
PPP1CA-202ENST00000358239 KRTAP10-4P60372 401 aaPredicted RBP13.09□□□□□ -0.31
PPP1CA-202ENST00000358239 PKIGQ9Y2B9 76 aa13.09□□□□□ -0.31
PPP1CA-202ENST00000358239 NPYP01303 97 aa13.08□□□□□ -0.32
PPP1CA-202ENST00000358239 SPACA4Q8TDM5 124 aa13.08□□□□□ -0.32
PPP1CA-202ENST00000358239 RPL37AP61513 92 aaKnown RBP13.07□□□□□ -0.32
PPP1CA-202ENST00000358239 TMEM136Q6ZRR5 245 aa13.06□□□□□ -0.32
PPP1CA-202ENST00000358239 DPH3Q96FX2 82 aa13.06□□□□□ -0.32
PPP1CA-202ENST00000358239 LAMTOR2Q9Y2Q5 125 aa13.06□□□□□ -0.32
PPP1CA-202ENST00000358239 COX6A2Q02221 97 aa13.05□□□□□ -0.32
PPP1CA-202ENST00000358239 UQCC3Q6UW78 93 aa13.05□□□□□ -0.32
PPP1CA-202ENST00000358239 PRELID3AQ96N28 172 aa13.05□□□□□ -0.32
PPP1CA-202ENST00000358239 SPANXA1Q9NS26 97 aa13.05□□□□□ -0.32
PPP1CA-202ENST00000358239 ZNF561-AS1K7EIQ3 104 aa13.04□□□□□ -0.32
PPP1CA-202ENST00000358239 COX7A2LO14548 114 aa13.04□□□□□ -0.32
PPP1CA-202ENST00000358239 CHTF8P0CG12 524 aa13.04□□□□□ -0.32
PPP1CA-202ENST00000358239 MALP21145 153 aa13.04□□□□□ -0.32
PPP1CA-202ENST00000358239 Q6ZUT4 128 aa13.04□□□□□ -0.32
PPP1CA-202ENST00000358239 A0A087WYN8 130 aa13.03□□□□□ -0.32
PPP1CA-202ENST00000358239 TRAV13-1A0A0B4J241 112 aa13.03□□□□□ -0.32
PPP1CA-202ENST00000358239 KRTAP29-1A8MX34 341 aaPredicted RBP13.03□□□□□ -0.32
PPP1CA-202ENST00000358239 J3QL48 77 aa13.03□□□□□ -0.32
PPP1CA-202ENST00000358239 RAB5AP20339 215 aa13.03□□□□□ -0.32
PPP1CA-202ENST00000358239 RPL39P62891 51 aaKnown RBP13.03□□□□□ -0.32
PPP1CA-202ENST00000358239 RNASE13Q5GAN3 156 aaKnown RBP13.03□□□□□ -0.32
PPP1CA-202ENST00000358239 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
PPP1CA-202ENST00000358239 CARD19Q96LW7 228 aa13.02□□□□□ -0.33
PPP1CA-202ENST00000358239 PLAC8Q9NZF1 115 aa13.02□□□□□ -0.33
PPP1CA-202ENST00000358239 PRSS47A8MTI9 375 aa13.01□□□□□ -0.33
PPP1CA-202ENST00000358239 PRSS3P2Q8NHM4 247 aa13.01□□□□□ -0.33
PPP1CA-202ENST00000358239 IMMP2LQ96T52 175 aa13.01□□□□□ -0.33
PPP1CA-202ENST00000358239 LINC00474Q9P2X8 69 aa13.01□□□□□ -0.33
PPP1CA-202ENST00000358239 APOMO95445 188 aa13□□□□□ -0.33
PPP1CA-202ENST00000358239 SYCNQ0VAF6 134 aa13□□□□□ -0.33
PPP1CA-202ENST00000358239 IFI27P40305 119 aaPredicted RBP12.99□□□□□ -0.33
PPP1CA-202ENST00000358239 MAP1LC3AQ9H492 121 aa12.99□□□□□ -0.33
PPP1CA-202ENST00000358239 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
PPP1CA-202ENST00000358239 MAJINQ3KP22 176 aa12.98□□□□□ -0.33
PPP1CA-202ENST00000358239 LINC00526Q96FQ7 95 aa12.98□□□□□ -0.33
PPP1CA-202ENST00000358239 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
PPP1CA-202ENST00000358239 PKHD1L1Q86WI1 4243 aa12.97□□□□□ -0.33
PPP1CA-202ENST00000358239 TMEM218A2RU14 115 aa12.97□□□□□ -0.33
PPP1CA-202ENST00000358239 IFITM2Q01629 132 aa12.97□□□□□ -0.33
PPP1CA-202ENST00000358239 FAM104AQ969W3 186 aa12.97□□□□□ -0.33
PPP1CA-202ENST00000358239 CTDSP1Q9GZU7 261 aa12.97□□□□□ -0.33
PPP1CA-202ENST00000358239 IGLV4-69A0A075B6H9 119 aa12.96□□□□□ -0.33
PPP1CA-202ENST00000358239 A0A096LNI7 61 aa12.96□□□□□ -0.33
PPP1CA-202ENST00000358239 K7EMI3 77 aa12.96□□□□□ -0.33
PPP1CA-202ENST00000358239 OXTP01178 125 aa12.96□□□□□ -0.33
PPP1CA-202ENST00000358239 ADCYAP1P18509 176 aa12.96□□□□□ -0.33
PPP1CA-202ENST00000358239 C7orf33Q8WU49 177 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms