RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 IGHV7-4-1A0A0J9YVY3 117 aa6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 USP17L23D6RBM5 183 aa6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 LITAFQ99732 161 aa6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 LINC00574Q9H8X3 128 aa6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 FSHBP01225 129 aa6.88□□□□□ -1.31
SMARCAL1-202ENST00000358207 SAA4P35542 130 aa6.88□□□□□ -1.31
SMARCAL1-202ENST00000358207 LY6EQ16553 131 aa6.88□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
SMARCAL1-202ENST00000358207 TRAV12-3A0A0B4J271 114 aa6.88□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGHV3-35A0A0C4DH35 117 aa6.88□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 ADARB2-AS1A8MUL3 147 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGHV4-38-2P0DP08 117 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 ADAMTSL4-AS1Q5T5F5 129 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 DPM3Q9P2X0 92 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 FBN3Q75N90 2809 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 A0A0J9YXY3 114 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGHV3-23P01764 117 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 PAPPA-AS1Q5QFB9 102 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 FAM19A1Q7Z5A9 133 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 TP53TG1Q9Y2A0 90 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 SERP1Q9Y6X1 66 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 TMEM243Q9BU79 118 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 LINC00474Q9P2X8 69 aa6.87□□□□□ -1.31
SMARCAL1-202ENST00000358207 BUB3O43684 328 aa6.86□□□□□ -1.31
SMARCAL1-202ENST00000358207 RPL39P62891 51 aaKnown RBP6.86□□□□□ -1.31
SMARCAL1-202ENST00000358207 LY6G5BQ8NDX9 201 aa6.86□□□□□ -1.31
SMARCAL1-202ENST00000358207 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
SMARCAL1-202ENST00000358207 NDUFC2-KCTD14E9PQ53 114 aa6.86□□□□□ -1.31
SMARCAL1-202ENST00000358207 LYPD5Q6UWN5 251 aa6.86□□□□□ -1.31
SMARCAL1-202ENST00000358207 SLC50A1Q9BRV3 221 aa6.86□□□□□ -1.31
SMARCAL1-202ENST00000358207 LEPROTO15243 131 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 NDUFC2O95298 119 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 HIST2H2BDQ6DRA6 164 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 M0R1W7 72 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 VMA21Q3ZAQ7 101 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 ZNF876PQ49A33 203 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 DAND5Q8N907 189 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 PRAC2D3DTV9 90 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 PDE6HQ13956 83 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
SMARCAL1-202ENST00000358207 I3L2K1 104 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 SS18Q15532 418 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 BEAN1Q3B7T3 259 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 TMEM89A2RUT3 159 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 NDPQ00604 133 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 ATRQ13535 2644 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 ECSCRQ19T08 205 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 SPANXN1Q5VSR9 72 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 RNF182Q8N6D2 247 aa6.84□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGHV4-4A0A075B6R2 117 aa6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 RPL27AP46776 148 aaKnown RBP6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 C6orf226Q5I0X4 101 aa6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 TMEM61Q8N0U2 210 aa6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 C20orf197Q8N268 126 aa6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 SMIM26A0A096LP01 95 aa6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 SDHAF1A6NFY7 115 aa6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 H7BZZ5 65 aa6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 NXPH4O95158 308 aa6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
SMARCAL1-202ENST00000358207 HILS1P60008 231 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 KRTAP24-1Q3LI83 254 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 A0A0J9YX75 114 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 G3V318 75 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 BAALC-AS2P0C853 105 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 XCL1P47992 114 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 Q6JHZ5 121 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 GPHB5Q86YW7 130 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 LINC00846Q9NV44 126 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 XCL2Q9UBD3 114 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 SMAD5-AS1Q9Y6J3 95 aa6.82□□□□□ -1.32
SMARCAL1-202ENST00000358207 MSMBP08118 114 aa6.81□□□□□ -1.32
SMARCAL1-202ENST00000358207 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
SMARCAL1-202ENST00000358207 Q8N2B8 174 aa6.81□□□□□ -1.32
SMARCAL1-202ENST00000358207 C20orf173Q96LM9 149 aa6.81□□□□□ -1.32
SMARCAL1-202ENST00000358207 IGHV1-69DA0A0B4J2H0 117 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 ODF3BA8MYP8 253 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 TEX22C9J3V5 150 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 TMEM30BQ3MIR4 351 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 IGHV3OR16-13A0A075B7E8 117 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 IGHV3-74A0A0B4J1X5 117 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 B4DSR2 109 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 H3BUX3 64 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 K7EIM0 57 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 GHRHP01286 108 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 C9orf47Q6ZRZ4 202 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 RETNQ9HD89 108 aa6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
SMARCAL1-202ENST00000358207 M0R381 172 aa6.79□□□□□ -1.32
SMARCAL1-202ENST00000358207 BLCAPP62952 87 aa6.79□□□□□ -1.32
SMARCAL1-202ENST00000358207 FAM218AQ96MZ4 157 aa6.79□□□□□ -1.32
SMARCAL1-202ENST00000358207 IGHV3-49A0A0A0MS15 119 aa6.79□□□□□ -1.32
SMARCAL1-202ENST00000358207 COX7A2LO14548 114 aa6.79□□□□□ -1.32
SMARCAL1-202ENST00000358207 TMEM141Q96I45 108 aa6.79□□□□□ -1.32
SMARCAL1-202ENST00000358207 TIMM17AQ99595 171 aa6.79□□□□□ -1.32
SMARCAL1-202ENST00000358207 KNCNA6PVL3 124 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 MGPP08493 103 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 IGHV3-30-3P0DP02 117 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 MIAQ16674 131 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms