RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 ARPC5O15511 151 aa5.28□□□□□ -1.56
COL4A3BP-202ENST00000357457 NCR2O95944 276 aa5.28□□□□□ -1.56
COL4A3BP-202ENST00000357457 LYZL1Q6UWQ5 148 aa5.28□□□□□ -1.56
COL4A3BP-202ENST00000357457 GATD1Q8NB37 220 aa5.28□□□□□ -1.56
COL4A3BP-202ENST00000357457 FAM213BQ8TBF2 198 aa5.28□□□□□ -1.56
COL4A3BP-202ENST00000357457 SMIM12Q96EX1 92 aa5.28□□□□□ -1.56
COL4A3BP-202ENST00000357457 CNFNQ9BYD5 112 aa5.28□□□□□ -1.56
COL4A3BP-202ENST00000357457 PKIGQ9Y2B9 76 aa5.28□□□□□ -1.56
COL4A3BP-202ENST00000357457 A0A1B0GV50 99 aa5.27□□□□□ -1.57
COL4A3BP-202ENST00000357457 IFNA1P01562 189 aa5.27□□□□□ -1.57
COL4A3BP-202ENST00000357457 CENPWQ5EE01 88 aa5.27□□□□□ -1.57
COL4A3BP-202ENST00000357457 Q6ZNX1 250 aa5.27□□□□□ -1.57
COL4A3BP-202ENST00000357457 OR5A1Q8NGJ0 315 aa5.27□□□□□ -1.57
COL4A3BP-202ENST00000357457 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
COL4A3BP-202ENST00000357457 IGHV1-58A0A0C4DH39 117 aa5.26□□□□□ -1.57
COL4A3BP-202ENST00000357457 H0Y8G0 127 aa5.26□□□□□ -1.57
COL4A3BP-202ENST00000357457 FGF6P10767 208 aa5.26□□□□□ -1.57
COL4A3BP-202ENST00000357457 TAGLN2P37802 199 aaKnown RBP5.26□□□□□ -1.57
COL4A3BP-202ENST00000357457 CCL20P78556 96 aa5.26□□□□□ -1.57
COL4A3BP-202ENST00000357457 ZNF345Q14585 488 aa5.26□□□□□ -1.57
COL4A3BP-202ENST00000357457 AMMECR1LQ6DCA0 310 aa5.26□□□□□ -1.57
COL4A3BP-202ENST00000357457 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 TRAV1-1A0A0B4J248 108 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 LINC00959A0A1B0GUT2 108 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 A0A1W2PNN7 141 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 IGKV2-29A2NJV5 120 aaPredicted RBP5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 RAB19A4D1S5 217 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 FAM231BA6NCW3 169 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 ZNF25P17030 456 aaPredicted RBP5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 CTRLP40313 264 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 XCL1P47992 114 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 RNASEKQ6P5S7 137 aaKnown RBP5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 LINC00526Q96FQ7 95 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 CARD19Q96LW7 228 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 MANBALQ9NQG1 85 aa5.25□□□□□ -1.57
COL4A3BP-202ENST00000357457 TRBV20OR9-2A0A075B6H5 130 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 TRAV26-2A0A0B4J265 109 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 SDHAF1A6NFY7 115 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 HMSDA8MTL9 139 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 CCL25O15444 150 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 APCSP02743 223 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 ESDP10768 282 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 GNG4P50150 75 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 SYCNQ0VAF6 134 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 TWIST1Q15672 202 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 TEX261Q6UWH6 196 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 CD164L2Q6UWJ8 174 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 ZNF664Q8N3J9 261 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 RPL39LQ96EH5 51 aaKnown RBP5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 FAM210AQ96ND0 272 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 BIN3Q9NQY0 253 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 GNG13Q9P2W3 67 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
COL4A3BP-202ENST00000357457 TRBV6-5A0A0K0K1A5 114 aa5.23□□□□□ -1.57
COL4A3BP-202ENST00000357457 KRTAP9-7A8MTY7 169 aa5.23□□□□□ -1.57
COL4A3BP-202ENST00000357457 I3L3M4 83 aa5.23□□□□□ -1.57
COL4A3BP-202ENST00000357457 PRYO14603 147 aa5.23□□□□□ -1.57
COL4A3BP-202ENST00000357457 CDC42SE2Q9NRR3 84 aa5.23□□□□□ -1.57
COL4A3BP-202ENST00000357457 PSORS1C2Q9UIG4 136 aa5.23□□□□□ -1.57
COL4A3BP-202ENST00000357457 LOC107984640A0A0U1RRK4 108 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 SMLR1H3BR10 107 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 BCL2L11O43521 198 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 PDE6DO43924 150 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 FOXA3P55318 350 aaPredicted RBP5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 GAGE2BQ13066 116 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 SS18Q15532 418 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 MRPL52Q86TS9 123 aaKnown RBP5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 NUP35Q8NFH5 326 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 ISOC2Q96AB3 205 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 TMEM101Q96IK0 257 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 BTF3L4Q96K17 158 aa5.22□□□□□ -1.57
COL4A3BP-202ENST00000357457 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
COL4A3BP-202ENST00000357457 PMCHP20382 165 aa5.21□□□□□ -1.58
COL4A3BP-202ENST00000357457 EIF5AP63241 154 aaKnown RBP5.21□□□□□ -1.58
COL4A3BP-202ENST00000357457 MEF2BQ02080 365 aaPredicted RBP5.21□□□□□ -1.58
COL4A3BP-202ENST00000357457 C9orf116Q5BN46 136 aaPredicted RBP5.21□□□□□ -1.58
COL4A3BP-202ENST00000357457 EIF5AL1Q6IS14 154 aaKnown RBP5.21□□□□□ -1.58
COL4A3BP-202ENST00000357457 IGLV4-69A0A075B6H9 119 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 KANTRA0A1W2PQU2 76 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 C1orf196B1AJZ1 125 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 K7EN84 100 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 APOMO95445 188 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 TSHBP01222 138 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 MT-ND6P03923 174 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 POLR2KP53803 58 aaKnown RBP5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 LBHQ53QV2 105 aaPredicted RBP5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 C1orf137Q5JT78 98 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 SMIM15Q7Z3B0 74 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 C2orf48Q96LS8 159 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 RNASE7Q9H1E1 156 aaKnown RBP5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 VCX2Q9H322 139 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 RPP21Q9H633 154 aaKnown RBP5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 MED9Q9NWA0 146 aa5.2□□□□□ -1.58
COL4A3BP-202ENST00000357457 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
COL4A3BP-202ENST00000357457 TEX46H3BTG2 121 aa5.19□□□□□ -1.58
COL4A3BP-202ENST00000357457 BCL2P10415 239 aa5.19□□□□□ -1.58
COL4A3BP-202ENST00000357457 MRAP2Q96G30 205 aa5.19□□□□□ -1.58
COL4A3BP-202ENST00000357457 CSDC2Q9Y534 153 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms